Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14n24
(459 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 41 6e-06
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 41 6e-06
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 26 0.22
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 26 0.22
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 25 0.30
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 1.6
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 3.7
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 4.8
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 4.8
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 4.8
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 4.8
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 4.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 4.8
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 4.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 4.8
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 6.4
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 21 6.4
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 41.1 bits (92), Expect = 6e-06
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEV-KGKDNVGAVMDSMELERQ 412
NI + H+DSGK+T T +++ G ID + E+ KG V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 413 RGITIQSAATYXIWK 457
RGITI A +WK
Sbjct: 69 RGITIDIA----LWK 79
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 41.1 bits (92), Expect = 6e-06
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERILFYTGRID---------QMHEV-KGKDNVGAVMDSMELERQ 412
NI + H+DSGK+T T +++ G ID + E+ KG V+D ++ ER+
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 413 RGITIQSAATYXIWK 457
RGITI A +WK
Sbjct: 69 RGITIDIA----LWK 79
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 25.8 bits (54), Expect = 0.22
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 373 CWCCYGLNGVGTS 411
CWCC L G G+S
Sbjct: 13 CWCCDNLGGPGSS 25
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 25.8 bits (54), Expect = 0.22
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +2
Query: 83 TVIIKLELFII*YFKMTISYAFRLINA-LKNTKKSSVFQIELQKYSSHVKY---AEHXPL 250
TV++KL L + + + N L++ + FQ + +Y + +EH L
Sbjct: 45 TVVVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFQWDPAEYGGVTELYVPSEHIWL 104
Query: 251 ENIRNIGISAHIDSGKTTLTERILFYTGRI 340
+I +A + G TT+T+ IL YTG++
Sbjct: 105 PDIVLYN-NADGEYGVTTMTKAILHYTGKV 133
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 383 VMDSMELERQRGITIQSAATYXIWK 457
V+D ++ ER+RGITI A +WK
Sbjct: 2 VLDKLKAERERGITIDIA----LWK 22
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.0 bits (47), Expect = 1.6
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 266 IGISAHIDSGKTTLTERI 319
+ I H+D GKTTL + +
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 3.7
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 263 NIGISAHIDSGKTTLTERI 319
NIG H+ GK+T+ + I
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 4.8
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 409 SKRNYXTVCCNIXYLE 456
+ NY +C NI Y+E
Sbjct: 95 NNNNYKQLCYNINYIE 110
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 4.8
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 409 SKRNYXTVCCNIXYLE 456
+ NY +C NI Y+E
Sbjct: 95 NNNNYKQLCYNINYIE 110
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 4.8
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 409 SKRNYXTVCCNIXYLE 456
+ NY +C NI Y+E
Sbjct: 95 NNNNYKQLCYNINYIE 110
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 4.8
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 409 SKRNYXTVCCNIXYLE 456
+ NY +C NI Y+E
Sbjct: 95 NNNNYKQLCYNINYIE 110
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 4.8
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +1
Query: 409 SKRNYXTVCCNIXYLE 456
+ NY +C NI Y+E
Sbjct: 95 NNNNYKQLCYNINYIE 110
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.8
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +3
Query: 162 RLKIQKNRVYFKLSYRNIHHMSNMQNTNH 248
R + ++ ++ LS + IH+ +N N N+
Sbjct: 73 RERSREPKIISSLSNKTIHNNNNYNNNNY 101
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 4.8
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +3
Query: 162 RLKIQKNRVYFKLSYRNIHHMSNMQNTNH 248
R + ++ ++ LS + IH+ +N N N+
Sbjct: 73 RERSREPKIISSLSNKTIHNNNNYNNNNY 101
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 4.8
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +3
Query: 162 RLKIQKNRVYFKLSYRNIHHMSNMQNTNH 248
R + ++ ++ LS + IH+ +N N N+
Sbjct: 306 RERSREPKIISSLSNKTIHNNNNYNNNNY 334
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.0 bits (42), Expect = 6.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 334 SSIEQNTFSECCLSRV 287
SS QNT +EC L++V
Sbjct: 264 SSENQNTSAECKLAKV 279
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 21.0 bits (42), Expect = 6.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 334 SSIEQNTFSECCLSRV 287
SS QNT +EC L++V
Sbjct: 14 SSENQNTSAECKLAKV 29
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,895
Number of Sequences: 438
Number of extensions: 2472
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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