Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14n17
(225 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC577.02 |rpl3801|rpl38-1|60S ribosomal protein L38|Schizosacc... 79 6e-17
SPAC30D11.12 |rpl3802|rpl38-2, rps38|60S ribosomal protein L38|S... 75 1e-15
SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein] reductase|Schiz... 31 0.016
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 27 0.44
SPAC1687.04 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 1.0
SPCC16A11.01 ||SPCC63.15|conserved fungal protein|Schizosaccharo... 25 1.3
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 24 2.4
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 23 4.1
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 23 5.4
SPAC1F8.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 23 5.4
SPBC428.15 |||GTP binding protein|Schizosaccharomyces pombe|chr ... 23 5.4
SPBC3D6.07 |gpi3||pig-A|Schizosaccharomyces pombe|chr 2|||Manual 23 5.4
SPAC823.04 |||rRNA processing protein, DUF947|Schizosaccharomyce... 23 5.4
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 22 9.5
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 22 9.5
>SPBC577.02 |rpl3801|rpl38-1|60S ribosomal protein
L38|Schizosaccharomyces pombe|chr 2|||Manual
Length = 74
Score = 79.4 bits (187), Expect = 6e-17
Identities = 38/56 (67%), Positives = 47/56 (83%), Gaps = 1/56 (1%)
Frame = +2
Query: 8 ARRKDAKSVKIKKNP-ENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 172
ARRKDA S +IKKN ++VKFK+RCS++LYTLV+ D +KAEKL+QSLPP L V EV
Sbjct: 15 ARRKDATSARIKKNTNKDVKFKLRCSKYLYTLVVADAKKAEKLRQSLPPDLTVTEV 70
>SPAC30D11.12 |rpl3802|rpl38-2, rps38|60S ribosomal protein
L38|Schizosaccharomyces pombe|chr 1|||Manual
Length = 74
Score = 74.9 bits (176), Expect = 1e-15
Identities = 36/56 (64%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +2
Query: 8 ARRKDAKSVKIKKNPEN-VKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEV 172
A R DA S ++KKN VKFK+RCSR+LYTLV+ D +KAEKL+QSLPP L V EV
Sbjct: 15 AHRGDATSARVKKNQNKAVKFKLRCSRYLYTLVVADAKKAEKLRQSLPPALTVTEV 70
>SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein]
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 31.5 bits (68), Expect = 0.016
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +2
Query: 26 KSVKIKKN-PENVKFKVRCSRFLYTLVITDKEKAEK--LKQSLPPGLQVKEVK 175
KS+ + +N P+ K K + T+VITD+E ++ +KQ +P +Q EVK
Sbjct: 200 KSINVVRNRPDIEKLKEQLKSLGATIVITDEELMDRKTMKQKVPEWIQGGEVK 252
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 26.6 bits (56), Expect = 0.44
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 111 SVMTRVYRNLEHRTLNLTFSGFFFILTDLASF 16
S+ + +Y R NL +GFFF+L + SF
Sbjct: 344 SLCSGLYMKKTGRYRNLVIAGFFFMLMGIVSF 375
>SPAC1687.04 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 25.4 bits (53), Expect = 1.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 111 SVMTRVYRNLEHRTLNLTFSGFFFILTDLASFLLA 7
S+M + N+ H+T L GF LT+ S L++
Sbjct: 253 SLMLALLSNVVHKTTGLVIGGFTLNLTNCTSELVS 287
>SPCC16A11.01 ||SPCC63.15|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 328
Score = 25.0 bits (52), Expect = 1.3
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1
Query: 57 FSGFFFILTDLASFLL 10
F GFFFIL L SFL+
Sbjct: 17 FWGFFFILFPLVSFLM 32
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 24.2 bits (50), Expect = 2.4
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +3
Query: 60 SSSRFDAQGSCTPWSSLTKRRLRNLSRVYLQVSKLKK*SDVTRL 191
S S + TP SS N +YL ++ LKK V RL
Sbjct: 159 SYSYYSGPNPATPSSSSCNLVNANSLDIYLNINNLKKSKSVPRL 202
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 23.4 bits (48), Expect = 4.1
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 138 CLSFSAF--SLSVMTRVYRNLEHRTLNLTFSGF 46
C+ F + ++ TR++ +L +TL T SGF
Sbjct: 988 CIGFKSAMPEYTLRTRIWASLRSQTLYRTISGF 1020
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 180 HHFTSLTWRPGGKLCL 133
HH T + PG KLC+
Sbjct: 202 HHLTDRSQTPGWKLCV 217
>SPAC1F8.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 226
Score = 23.0 bits (47), Expect = 5.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 87 NLEHRTLNLTFSGFFFILT 31
N E T++ TFSGF+ LT
Sbjct: 25 NEEGETVDFTFSGFYANLT 43
>SPBC428.15 |||GTP binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 409
Score = 23.0 bits (47), Expect = 5.4
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 24 PNRSK*RRTLRMSSSRFDAQGSCTPWSSLTKRRLRNLSRVYLQVSKL 164
PNR+ + + SRF Q C P K +R++ L V+ L
Sbjct: 41 PNRAIGYAQIECACSRFGLQDKCKPIYGGCKNGVRSIPIQLLDVAGL 87
>SPBC3D6.07 |gpi3||pig-A|Schizosaccharomyces pombe|chr 2|||Manual
Length = 456
Score = 23.0 bits (47), Expect = 5.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 65 FKVRCSRFLYTLVITDKEKAEKLK 136
FK+ F +LV+TD +K K+K
Sbjct: 425 FKISKQNFDESLVLTDPKKKTKIK 448
>SPAC823.04 |||rRNA processing protein, DUF947|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 189
Score = 23.0 bits (47), Expect = 5.4
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +2
Query: 2 IKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKEVK 175
+K + + K +K+K P+ + K SRF + K + SL L +VK
Sbjct: 1 MKTQTTNQKQLKVKHAPQELSSKKPVSRFREVISEPKKFTRDPRFDSLSGNLSKDKVK 58
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 22.2 bits (45), Expect = 9.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -1
Query: 111 SVMTRVYRNLEHRTLNLTFSGF 46
++ TR++ +L +TL T SGF
Sbjct: 975 TLRTRIWASLRSQTLYRTVSGF 996
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 22.2 bits (45), Expect = 9.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 11 RRKDAKSVKIKKNPENVKFKV 73
+RK+ KS NP N+K K+
Sbjct: 20 KRKEEKSHNPNGNPRNLKAKI 40
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,708
Number of Sequences: 5004
Number of extensions: 11687
Number of successful extensions: 29
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 2,362,478
effective HSP length: 54
effective length of database: 2,092,262
effective search space used: 41845240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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