Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14n17
         (225 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   1.1  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              20   3.2  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              20   3.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   4.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   4.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          19   5.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   5.7  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    19   7.5  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    19   9.9  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 1.1
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +1

Query: 22  RQIGQNKEEP*ECQVQGSMLKVPVHPGHH 108
           R  G+  E+P  C + G    VP     H
Sbjct: 82  RSHGKEGEDPYRCNICGKTFAVPARLTRH 110


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 3.2
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = +2

Query: 20  DAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 145
           D    KI  + ENV   + C+   + +V  +    EK+   +
Sbjct: 46  DINEGKINMDDENVLLFIECTMKKFNVVDENANFNEKISSDI 87


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 3.2
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = +2

Query: 20  DAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 145
           D    KI    ENV+  + C+   ++ V  D    E + + +
Sbjct: 46  DVNDGKINIEDENVQLYIECAMKKFSFVDKDGNFNEHVSREI 87


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 4.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 89   LYTLVITDKEKAEKLKQSLP 148
            LYT V+  +E+    K++LP
Sbjct: 1249 LYTRVVDGREELNHGKRTLP 1268


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 4.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 89   LYTLVITDKEKAEKLKQSLP 148
            LYT V+  +E+    K++LP
Sbjct: 1245 LYTRVVDGREELNHGKRTLP 1264


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = +2

Query: 62  KFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQV 163
           +F V    +LY L +    + +     LPP  +V
Sbjct: 130 RFNVNEQMYLYALSVAVIHRPDTKLMKLPPMYEV 163


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = +2

Query: 62  KFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQV 163
           +F V    +LY L +    + +     LPP  +V
Sbjct: 130 RFNVNEQMYLYALSVAVIHRPDTKLMKLPPMYEV 163


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 19.0 bits (37), Expect = 7.5
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = -1

Query: 183 LHHFTSLTWRP 151
           LHH   + W+P
Sbjct: 127 LHHTGKVVWKP 137


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 18.6 bits (36), Expect = 9.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 183 LHHFTSLTWRPGGKLCLSFSAFSLSVMT 100
           L   T  TW  G  LC S+ +  + + T
Sbjct: 96  LLQLTGGTWELGPMLCDSWVSLDILLCT 123


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,718
Number of Sequences: 438
Number of extensions: 731
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3533460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)