Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14n07
         (564 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0687 - 5197349-5198665                                           29   1.9  
01_01_0426 + 3234987-3235935,3236744-3236782,3237044-3237409,324...    28   5.9  
06_01_0767 + 5732573-5732670,5733223-5733278,5733928-5734007,573...    27   7.8  
01_06_0086 + 26293452-26294030,26295309-26295353,26295543-26296175     27   7.8  

>07_01_0687 - 5197349-5198665
          Length = 438

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = +3

Query: 171 SALFTKNWRVARGLP--VNRNA-EGILTDGPDYTFLDGRP 281
           S+ +   WR  + LP  V R+A  G++ +G  Y  LDGRP
Sbjct: 209 SSRYHMRWRAKKALPMCVRRDAIGGVVINGVVYFLLDGRP 248


>01_01_0426 +
           3234987-3235935,3236744-3236782,3237044-3237409,
           3240871-3242315
          Length = 932

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = +3

Query: 45  NCSLVFIFPFKYTSKQ*NQRMNNLTGNKILKTITGLRSFSSCSALFTK 188
           N  +V  FPF +  K  N R+  L  NKI  TI GL+S    S  FT+
Sbjct: 789 NNQIVDSFPF-WLGKLPNLRVLVLRSNKINGTIRGLKSGYQNSDYFTR 835


>06_01_0767 +
           5732573-5732670,5733223-5733278,5733928-5734007,
           5735334-5735372,5735563-5735950,5736049-5737562
          Length = 724

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 510 HLQLLYKYIFYDKFFFCN 457
           ++ L + Y F+DKFFFC+
Sbjct: 426 YIHLDHDYTFHDKFFFCD 443


>01_06_0086 + 26293452-26294030,26295309-26295353,26295543-26296175
          Length = 418

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 91  CLLVYLKGKMKTREQFLGYSHRPNHGSIKY 2
           CL+ Y +  M T E F+G    PN G  +Y
Sbjct: 28  CLITYGEMIMATYEAFIGEHRSPNAGMCRY 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,077,192
Number of Sequences: 37544
Number of extensions: 185300
Number of successful extensions: 459
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)