Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14n04
         (665 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011895-1|AAH11895.1|  265|Homo sapiens coenzyme Q4 homolog (S....    67   5e-11
AL359091-4|CAI13487.1|  265|Homo sapiens coenzyme Q4 homolog (S....    67   5e-11
AF151850-1|AAD34087.1|  265|Homo sapiens CGI-92 protein protein.       67   5e-11

>BC011895-1|AAH11895.1|  265|Homo sapiens coenzyme Q4 homolog (S.
           cerevisiae) protein.
          Length = 265

 Score = 67.3 bits (157), Expect = 5e-11
 Identities = 26/64 (40%), Positives = 40/64 (62%)
 Frame = +3

Query: 471 QVTVKWVEGIQTKLPMCIGGGIWGAARLRPKHRQMYLKYYLPWAIRTGNNAKFLQGIYFE 650
           ++ VKW E +QT LPMCI G  +G  RL  +  Q+ +   +PWA++ G  A  +  +Y+E
Sbjct: 179 EIVVKWFEAVQTGLPMCILGAFFGPIRLGAQSLQVLVSELIPWAVQNGRRAPCVLNLYYE 238

Query: 651 KRWE 662
           +RWE
Sbjct: 239 RRWE 242


>AL359091-4|CAI13487.1|  265|Homo sapiens coenzyme Q4 homolog (S.
           cerevisiae) protein.
          Length = 265

 Score = 67.3 bits (157), Expect = 5e-11
 Identities = 26/64 (40%), Positives = 40/64 (62%)
 Frame = +3

Query: 471 QVTVKWVEGIQTKLPMCIGGGIWGAARLRPKHRQMYLKYYLPWAIRTGNNAKFLQGIYFE 650
           ++ VKW E +QT LPMCI G  +G  RL  +  Q+ +   +PWA++ G  A  +  +Y+E
Sbjct: 179 EIVVKWFEAVQTGLPMCILGAFFGPIRLGAQSLQVLVSELIPWAVQNGRRAPCVLNLYYE 238

Query: 651 KRWE 662
           +RWE
Sbjct: 239 RRWE 242


>AF151850-1|AAD34087.1|  265|Homo sapiens CGI-92 protein protein.
          Length = 265

 Score = 67.3 bits (157), Expect = 5e-11
 Identities = 26/64 (40%), Positives = 40/64 (62%)
 Frame = +3

Query: 471 QVTVKWVEGIQTKLPMCIGGGIWGAARLRPKHRQMYLKYYLPWAIRTGNNAKFLQGIYFE 650
           ++ VKW E +QT LPMCI G  +G  RL  +  Q+ +   +PWA++ G  A  +  +Y+E
Sbjct: 179 EIVVKWFEAVQTGLPMCILGAFFGPIRLGAQSLQVLVSELIPWAVQNGRRAHCVLNLYYE 238

Query: 651 KRWE 662
           +RWE
Sbjct: 239 RRWE 242


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,606,823
Number of Sequences: 237096
Number of extensions: 1607268
Number of successful extensions: 2436
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2436
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)