Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14n03
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   1.3  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   1.7  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   1.7  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   4.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   4.0  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   4.0  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = -3

Query: 192 KQFASLRTALREQNHREHSQHRSLSHPQRYVHLGSFSSL 76
           + F    +   +Q  ++H Q  S  H       G FSSL
Sbjct: 89  QSFMQQHSLYLQQQQQQHHQDSSSEHASNQERFGYFSSL 127


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 234 WDEIFHVRILIQKYIYILV 290
           +DEI H  + +QKY Y+ +
Sbjct: 525 FDEIKHDMVYLQKYFYLFM 543


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 234 WDEIFHVRILIQKYIYILV 290
           +DEI H  + +QKY Y+ +
Sbjct: 525 FDEIKHDMVYLQKYFYLFM 543


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 234 WDEIFHVRILIQKYIYILVLPRWS 305
           WD  +    L+ +  Y L LP W+
Sbjct: 172 WDYYYIYHTLVAEQSYGLTLPSWT 195


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 234 WDEIFHVRILIQKYIYILVLPRWS 305
           WD  +    L+ +  Y L LP W+
Sbjct: 187 WDYYYIYHTLVAEQSYGLTLPSWT 210


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 234 WDEIFHVRILIQKYIYILVLPRWS 305
           WD  +    L+ +  Y L LP W+
Sbjct: 75  WDYYYIYHTLVAEQSYGLTLPSWT 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,122
Number of Sequences: 438
Number of extensions: 3455
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)