Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14m24
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089357-1|AAL90095.1|  479|Drosophila melanogaster AT18413p pro...    75   1e-13
AE014298-515|AAF45864.1|  479|Drosophila melanogaster CG10793-PA...    75   1e-13
AE014297-2824|AAF55784.1|  650|Drosophila melanogaster CG5434-PA...    31   1.7  
AY070634-1|AAL48105.1|  237|Drosophila melanogaster RH01588p pro...    30   3.0  
AE013599-2465|AAF57866.2|  237|Drosophila melanogaster CG18467-P...    30   3.0  
U15803-1|AAC36490.1|  674|Drosophila melanogaster InaD protein.        29   4.0  
BT004473-1|AAO42637.1|  674|Drosophila melanogaster RH58949p pro...    29   4.0  
AF245280-1|AAF81203.1|  674|Drosophila melanogaster INAD protein.      29   4.0  
AE013599-3488|AAF46915.1|  674|Drosophila melanogaster CG3504-PA...    29   4.0  
BT021404-1|AAX33552.1|  411|Drosophila melanogaster LD11219p pro...    29   5.3  
AF152419-1|AAD38390.1|  411|Drosophila melanogaster WD-40 protei...    29   5.3  
AF117606-1|AAD13113.1|  411|Drosophila melanogaster lissencephal...    29   5.3  
AE013599-2210|AAS64845.1|  411|Drosophila melanogaster CG8440-PF...    29   5.3  
AE013599-2209|AAO41383.1|  411|Drosophila melanogaster CG8440-PE...    29   5.3  
AE013599-2208|AAO41382.1|  411|Drosophila melanogaster CG8440-PD...    29   5.3  
AE013599-2207|AAO41381.1|  411|Drosophila melanogaster CG8440-PC...    29   5.3  
AE013599-2206|AAO41380.1|  411|Drosophila melanogaster CG8440-PB...    29   5.3  
AE013599-2205|AAF58050.1|  411|Drosophila melanogaster CG8440-PA...    29   5.3  

>AY089357-1|AAL90095.1|  479|Drosophila melanogaster AT18413p
           protein.
          Length = 479

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 32/74 (43%), Positives = 48/74 (64%)
 Frame = +3

Query: 243 FRARKRILKYMVLGYLKQEGYLLTAETFNTEANLTGEYEVCDNIDLDIILQDYCSYYLIR 422
           F  R+R + Y++  YL + GY  +AE+  +E  LT EYE+CDNIDLD +  +Y S+Y ++
Sbjct: 25  FSTRRRNILYLMHRYLVENGYYASAESLKSEGRLTDEYELCDNIDLDAMYLEYASFYNMK 84

Query: 423 FNKQPQFCRKVEEK 464
           F K P+  +KV  K
Sbjct: 85  FGKYPKILKKVGAK 98


>AE014298-515|AAF45864.1|  479|Drosophila melanogaster CG10793-PA
           protein.
          Length = 479

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 32/74 (43%), Positives = 48/74 (64%)
 Frame = +3

Query: 243 FRARKRILKYMVLGYLKQEGYLLTAETFNTEANLTGEYEVCDNIDLDIILQDYCSYYLIR 422
           F  R+R + Y++  YL + GY  +AE+  +E  LT EYE+CDNIDLD +  +Y S+Y ++
Sbjct: 25  FSTRRRNILYLMHRYLVENGYYASAESLKSEGRLTDEYELCDNIDLDAMYLEYASFYNMK 84

Query: 423 FNKQPQFCRKVEEK 464
           F K P+  +KV  K
Sbjct: 85  FGKYPKILKKVGAK 98


>AE014297-2824|AAF55784.1|  650|Drosophila melanogaster CG5434-PA
           protein.
          Length = 650

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +3

Query: 399 YCSYYLIRFNKQPQFCRKVEEKPVRPQTRRVKPERSQVLDVVEKNDLDLPSTFTVTSLLK 578
           YC Y L   NKQ Q  + +++  ++P    +K  R+QVL  +E+ D  L S   +     
Sbjct: 83  YCEYQL---NKQQQALKTIDDAGLQPLPPNLKELRTQVLYRLERYDECLDSYRDIIKNTS 139

Query: 579 D-FSEIQNTSTAS*QGN 626
           D + E + T+ ++   N
Sbjct: 140 DEYEEERRTNLSAVAAN 156


>AY070634-1|AAL48105.1|  237|Drosophila melanogaster RH01588p
           protein.
          Length = 237

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 243 FRARKRILKYMVLGYLKQEGYLLTAETFNTEANL 344
           F+ R+  L  +V+ YL  EGY   A+ F TEA++
Sbjct: 17  FQCRQADLNRLVMNYLVTEGYQEAAKRFMTEASV 50


>AE013599-2465|AAF57866.2|  237|Drosophila melanogaster CG18467-PA
           protein.
          Length = 237

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 243 FRARKRILKYMVLGYLKQEGYLLTAETFNTEANL 344
           F+ R+  L  +V+ YL  EGY   A+ F TEA++
Sbjct: 17  FQCRQADLNRLVMNYLVTEGYQEAAKRFMTEASV 50


>U15803-1|AAC36490.1|  674|Drosophila melanogaster InaD protein.
          Length = 674

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 429 KQPQFCRKVEEKPVRPQTRRVKPERSQVLDV-VEKNDL 539
           K+ +  +K EEKP  P T  +KP +  ++++ VEK  +
Sbjct: 462 KKKEEAKKEEEKPQEPATAEIKPNKKILIELKVEKKPM 499


>BT004473-1|AAO42637.1|  674|Drosophila melanogaster RH58949p
           protein.
          Length = 674

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 429 KQPQFCRKVEEKPVRPQTRRVKPERSQVLDV-VEKNDL 539
           K+ +  +K EEKP  P T  +KP +  ++++ VEK  +
Sbjct: 462 KKKEEAKKEEEKPQEPATAEIKPNKKILIELKVEKKPM 499


>AF245280-1|AAF81203.1|  674|Drosophila melanogaster INAD protein.
          Length = 674

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 429 KQPQFCRKVEEKPVRPQTRRVKPERSQVLDV-VEKNDL 539
           K+ +  +K EEKP  P T  +KP +  ++++ VEK  +
Sbjct: 462 KKKEEAKKEEEKPQEPATAEIKPNKKILIELKVEKKPM 499


>AE013599-3488|AAF46915.1|  674|Drosophila melanogaster CG3504-PA
           protein.
          Length = 674

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query: 429 KQPQFCRKVEEKPVRPQTRRVKPERSQVLDV-VEKNDL 539
           K+ +  +K EEKP  P T  +KP +  ++++ VEK  +
Sbjct: 462 KKKEEAKKEEEKPQEPATAEIKPNKKILIELKVEKKPM 499


>BT021404-1|AAX33552.1|  411|Drosophila melanogaster LD11219p
           protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 231 KEALFRARKRILKYMVLGYLKQEGYLLTAETFNTEANLTGEYE 359
           K  L + ++  L   +  YL   GY  + ETF  EA+L+ E E
Sbjct: 2   KMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVE 44


>AF152419-1|AAD38390.1|  411|Drosophila melanogaster WD-40 protein
           LIS1 protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 231 KEALFRARKRILKYMVLGYLKQEGYLLTAETFNTEANLTGEYE 359
           K  L + ++  L   +  YL   GY  + ETF  EA+L+ E E
Sbjct: 2   KMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVE 44


>AF117606-1|AAD13113.1|  411|Drosophila melanogaster lissencephaly-1
           protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 231 KEALFRARKRILKYMVLGYLKQEGYLLTAETFNTEANLTGEYE 359
           K  L + ++  L   +  YL   GY  + ETF  EA+L+ E E
Sbjct: 2   KMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVE 44


>AE013599-2210|AAS64845.1|  411|Drosophila melanogaster CG8440-PF,
           isoform F protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 231 KEALFRARKRILKYMVLGYLKQEGYLLTAETFNTEANLTGEYE 359
           K  L + ++  L   +  YL   GY  + ETF  EA+L+ E E
Sbjct: 2   KMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVE 44


>AE013599-2209|AAO41383.1|  411|Drosophila melanogaster CG8440-PE,
           isoform E protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 231 KEALFRARKRILKYMVLGYLKQEGYLLTAETFNTEANLTGEYE 359
           K  L + ++  L   +  YL   GY  + ETF  EA+L+ E E
Sbjct: 2   KMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVE 44


>AE013599-2208|AAO41382.1|  411|Drosophila melanogaster CG8440-PD,
           isoform D protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 231 KEALFRARKRILKYMVLGYLKQEGYLLTAETFNTEANLTGEYE 359
           K  L + ++  L   +  YL   GY  + ETF  EA+L+ E E
Sbjct: 2   KMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVE 44


>AE013599-2207|AAO41381.1|  411|Drosophila melanogaster CG8440-PC,
           isoform C protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 231 KEALFRARKRILKYMVLGYLKQEGYLLTAETFNTEANLTGEYE 359
           K  L + ++  L   +  YL   GY  + ETF  EA+L+ E E
Sbjct: 2   KMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVE 44


>AE013599-2206|AAO41380.1|  411|Drosophila melanogaster CG8440-PB,
           isoform B protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 231 KEALFRARKRILKYMVLGYLKQEGYLLTAETFNTEANLTGEYE 359
           K  L + ++  L   +  YL   GY  + ETF  EA+L+ E E
Sbjct: 2   KMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVE 44


>AE013599-2205|AAF58050.1|  411|Drosophila melanogaster CG8440-PA,
           isoform A protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 231 KEALFRARKRILKYMVLGYLKQEGYLLTAETFNTEANLTGEYE 359
           K  L + ++  L   +  YL   GY  + ETF  EA+L+ E E
Sbjct: 2   KMVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVE 44


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,966,543
Number of Sequences: 53049
Number of extensions: 475127
Number of successful extensions: 1245
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)