Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14m24
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.61 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   1.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.3  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   7.6  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 521 HIENLASFWLHPPGLRTYWFLLHFTTELGLLVKSYKI 411
           ++EN  ++++   GL TY+F L       L  K Y +
Sbjct: 215 NLENKLNYFIEDIGLNTYYFFLRQAFPFWLPSKEYDL 251


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -1

Query: 521 HIENLASFWLHPPGLRTYWFLLHFTTELGLLVKSYKI 411
           ++EN   +++   GL TY+F L       L  K Y +
Sbjct: 215 NLENKLIYFIEDIGLNTYYFFLRQAFPFWLPSKEYDL 251


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 518 CGREK*SGFTFYFHCNEFTEGFFR 589
           CG +K SGF +  H  E  +GFFR
Sbjct: 70  CG-DKASGFHYGVHSCEGCKGFFR 92


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 504 FVLASPSWSADVLVSPPLYDR 442
           F + S   ++ ++VSP LYDR
Sbjct: 266 FTIQSSVTTSKMMVSPRLYDR 286


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 364 ATILTWILYSRIIAAIIL 417
           A I TW+ + RI+  I+L
Sbjct: 46  ANIPTWLSFIRIVLVILL 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,862
Number of Sequences: 438
Number of extensions: 2996
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)