Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14m16
         (644 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1034 - 25562214-25562280,25562661-25562794,25562990-255631...    29   4.2  
05_01_0272 + 2111918-2112175,2112666-2113637                           29   4.2  
03_01_0271 + 2097027-2098583                                           29   4.2  
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11...    28   5.5  

>12_02_1034 -
           25562214-25562280,25562661-25562794,25562990-25563109,
           25563331-25563510,25563847-25564020,25564466-25564639,
           25564734-25564827,25566088-25566242
          Length = 365

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 19/71 (26%), Positives = 35/71 (49%)
 Frame = +3

Query: 150 KLWYMTKTTIISTPVKPLVSNPVVTKVEDALDRVTELLVVKMIQLRDKQLPGELEYLQKE 329
           ++W   K   IS+    L  NP  T+V   + R+T+L   K   L  + +   ++ + K 
Sbjct: 133 RIWQAEKIVAISSFQIALQHNPQNTEVSRKIKRLTQLAREKKRALDVENMRSNVD-VAKN 191

Query: 330 LEKVKRKLKGE 362
           L+ +K +L G+
Sbjct: 192 LDSLKTELAGK 202


>05_01_0272 + 2111918-2112175,2112666-2113637
          Length = 409

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +3

Query: 231 EDALDRVTELLVVKMIQLRDKQLPGELEYLQKELEKVKRKLKGEQ 365
           E  L   TELL+ ++ ++RD++  GEL+   KE +   + LK +Q
Sbjct: 82  EKVLSEATELLLEELNRMRDEE--GELKKKMKEDKDAMKALKKQQ 124


>03_01_0271 + 2097027-2098583
          Length = 518

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 436 PFTAFCIYLYIYLSFTASSKALKPPISIAW 525
           PF A  + LYIYL ++ S+KA  P +   W
Sbjct: 14  PFLALLLPLYIYLRYSRSAKA-NPSLPTEW 42


>03_01_0014 +
           113638-113754,113836-113950,114570-114835,115365-115575,
           115915-115979,118723-118930,119457-119566,119663-119913,
           120250-120356,120442-120509,120624-120701,121070-121198,
           121341-121481,122297-122344,122648-122743,124071-124183,
           124441-124591,124745-124818,124913-125072,125356-125454,
           125532-125618,125761-125907
          Length = 946

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 278 YHFHN*KLCDPIQCVFHLCYNWIAN 204
           YH  N   CDP  C+ H C +W AN
Sbjct: 163 YHLKN-SPCDP--CMVHCCLHWCAN 184


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,846,122
Number of Sequences: 37544
Number of extensions: 239936
Number of successful extensions: 733
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)