Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14m16
         (644 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024831-12|AAW57824.1|  356|Caenorhabditis elegans Serpentine r...    31   0.70 
U80445-6|AAB37797.2|  575|Caenorhabditis elegans Hypothetical pr...    31   0.92 
AC024831-6|AAY86308.1|  351|Caenorhabditis elegans Hypothetical ...    31   0.92 
AC024831-8|AAK72079.3|  362|Caenorhabditis elegans Serpentine re...    30   1.2  
Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U64841-2|AAB04846.2|  337|Caenorhabditis elegans Serpentine rece...    29   2.1  
Z73103-2|CAA97425.2|  400|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U88172-8|AAB42258.1|  312|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U41263-9|AAC24424.1|  179|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AF039036-5|AAB94164.2|  351|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z78417-12|CAO78731.1|  318|Caenorhabditis elegans Hypothetical p...    28   6.5  
Z78417-11|CAE17739.1|  294|Caenorhabditis elegans Hypothetical p...    28   6.5  
Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z75543-4|CAA99871.1|  383|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U97008-9|AAB52314.2|  434|Caenorhabditis elegans Cytochrome p450...    27   8.6  

>AC024831-12|AAW57824.1|  356|Caenorhabditis elegans Serpentine
           receptor, class t protein23 protein.
          Length = 356

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 433 CPFTAFCIYLYIYLSFTASSKALKPPISIAWQYA 534
           C F A   Y+Y+Y+ F  S  A+     +AWQ A
Sbjct: 257 CSFNAIAAYIYVYMQFFYSPPAVVLVGQLAWQCA 290


>U80445-6|AAB37797.2|  575|Caenorhabditis elegans Hypothetical
           protein C50F2.1 protein.
          Length = 575

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -1

Query: 518 MEIGGFKALLDAV---NDRYIYKYIQKAVKGQLSLLILYEKQFV 396
           +E+GGFK L DA+   ND +++  I   ++  +S + L   QF+
Sbjct: 389 IELGGFKILFDAINSFNDEFVHLNILDTIRAVISYVSLKTCQFL 432


>AC024831-6|AAY86308.1|  351|Caenorhabditis elegans Hypothetical
           protein Y55F3C.10 protein.
          Length = 351

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 433 CPFTAFCIYLYIYLSFTASSKALKPPISIAWQYA 534
           C F A   Y+Y+Y+ F  S  A+     +AWQ A
Sbjct: 253 CSFNAIAAYIYVYMQFFYSPPAVVLIGQLAWQCA 286


>AC024831-8|AAK72079.3|  362|Caenorhabditis elegans Serpentine
           receptor, class t protein24 protein.
          Length = 362

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 433 CPFTAFCIYLYIYLSFTASSKALKPPISIAWQYA 534
           C F A   Y+Y+Y+ F ++S  +     I WQ++
Sbjct: 263 CSFNAIAAYIYVYMQFFSASPLVILVGQIGWQWS 296


>Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical
           protein T16G1.1 protein.
          Length = 695

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 358 ANSRDANKYN*NETNCFSYKINSDNCPFTAFC 453
           +NS + N +N N     SY  N+DNC F   C
Sbjct: 565 SNSNNNNNFNGNGNGDGSYNNNNDNCDFENRC 596


>U64841-2|AAB04846.2|  337|Caenorhabditis elegans Serpentine
           receptor, class t protein14 protein.
          Length = 337

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 433 CPFTAFCIYLYIYLSFTASSKALKPPISIAWQYA 534
           C F A   Y+Y+Y+ F  S   L     IAWQ++
Sbjct: 229 CSFHAIAAYIYVYMQFFPSPPWLIIIGQIAWQWS 262


>Z73103-2|CAA97425.2|  400|Caenorhabditis elegans Hypothetical
           protein C08F8.3 protein.
          Length = 400

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 234 DALDRVTELLVVKMIQLRDKQLPGELEYLQKELEKVKRKLKGEQS 368
           DA+  +T+   V    ++ KQ+   +E L+K+ E+ +R+ K  QS
Sbjct: 203 DAMWELTKTSSVAATDVQKKQMKEAIEQLRKDAEQFEREFKDSQS 247


>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
            T28C6.9 protein.
          Length = 1861

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = +3

Query: 267  VKMIQLRDKQLPGELEYLQKELEKVKRKLK 356
            V M + R +QL GE+E+ ++E E +KR+++
Sbjct: 915  VMMTKERVEQLEGEIEWKEEECEGLKRRIR 944


>U88172-8|AAB42258.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK354.3 protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/55 (27%), Positives = 32/55 (58%)
 Frame = +3

Query: 201 LVSNPVVTKVEDALDRVTELLVVKMIQLRDKQLPGELEYLQKELEKVKRKLKGEQ 365
           LV NP+VT++ D  ++  E    K  + +D++   + E  ++E ++ K++ K E+
Sbjct: 214 LVENPIVTEMSDRDEKKEEKKDDKKDEKKDEKKEAKKEEKKEEKKEEKKEEKKEE 268


>U41263-9|AAC24424.1|  179|Caenorhabditis elegans Hypothetical
           protein T19D12.3 protein.
          Length = 179

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 178 IVVFVIYHNLDTTGRTVCIETKAKSRAFRV 89
           IV+ V YH+ D  GRT    T  +SR ++V
Sbjct: 105 IVIVVGYHSDDDNGRTYTTLTHLRSRGYKV 134


>AF039036-5|AAB94164.2|  351|Caenorhabditis elegans Hypothetical
           protein E03D2.4 protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 433 CPFTAFCIYLYIYLSFTASSKALKPPISIAWQYA 534
           C F A   Y+Y+Y+ F  S   L     +AWQ++
Sbjct: 250 CTFHAIAAYIYVYMQFFHSPPWLIIIGQLAWQWS 283


>Z78417-12|CAO78731.1|  318|Caenorhabditis elegans Hypothetical
           protein C35C5.10b protein.
          Length = 318

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
 Frame = -2

Query: 628 NYRPSWKRFLPS--FVPL 581
           NY PSW+RFL S  F+PL
Sbjct: 51  NYLPSWQRFLESIVFIPL 68


>Z78417-11|CAE17739.1|  294|Caenorhabditis elegans Hypothetical
           protein C35C5.10a protein.
          Length = 294

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/18 (66%), Positives = 14/18 (77%), Gaps = 2/18 (11%)
 Frame = -2

Query: 628 NYRPSWKRFLPS--FVPL 581
           NY PSW+RFL S  F+PL
Sbjct: 27  NYLPSWQRFLESIVFIPL 44


>Z50176-2|CAA90539.1| 1115|Caenorhabditis elegans Hypothetical protein
            C09G1.2 protein.
          Length = 1115

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -3

Query: 639  APNKTIDRLGNDSFQVLSHFSVKKIQSHWWCHFGFRVLPCNGNRRF 502
            +P KT+ R   D     +HF+VKK +      FGF  LP    R F
Sbjct: 905  SPEKTLVRAEKD----FNHFTVKKKEECLSLSFGFIALPIKKRRPF 946


>Z75543-4|CAA99871.1|  383|Caenorhabditis elegans Hypothetical
           protein K01D12.4 protein.
          Length = 383

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 394 ETNCFS-YKINSDNCPFTAFCIYLYIYLSFTA 486
           +  CF+  +I  +N  F   CI L +YL+F A
Sbjct: 28  KVGCFARLRIYEENARFVLICIILIVYLAFGA 59


>U97008-9|AAB52314.2|  434|Caenorhabditis elegans Cytochrome p450
           family protein 35A1 protein.
          Length = 434

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
 Frame = +3

Query: 111 ALVSIQTVRPVVSKLWYM----TKTTIISTPVKPLVSNPVVTKVEDALDRVTE 257
           A+ SI+T++ ++  LW      T TT+IS   + L+   V+ K  + + ++TE
Sbjct: 220 AVKSIETLKTMIIDLWMTGQETTTTTLISGFTQLLLHPEVMVKAREEILKITE 272


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,801,390
Number of Sequences: 27780
Number of extensions: 239179
Number of successful extensions: 683
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)