Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14m10
         (503 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK057293-1|BAB71412.1|  367|Homo sapiens protein ( Homo sapiens ...    33   0.75 
AL772197-5|CAM15087.1|  711|Homo sapiens chromosome X open readi...    29   9.2  
AL772197-4|CAH71713.1|  682|Homo sapiens chromosome X open readi...    29   9.2  

>AK057293-1|BAB71412.1|  367|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32731 fis, clone TESTI2001134. ).
          Length = 367

 Score = 32.7 bits (71), Expect = 0.75
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +1

Query: 166 FLKKKVDEATSNSSLSNLRYVITEKPKWKVFKKREAVAIPAYTALKPLKGCPCGNSGP 339
           F K   +   S  S  +LR + +  P+W +    E + +   T L P+ GCP G  GP
Sbjct: 98  FAKPVPEHCASERSCLSLRDITSSWPQWLLILVLEGLWL-GLTFLLPVPGCPTGYLGP 154


>AL772197-5|CAM15087.1|  711|Homo sapiens chromosome X open reading
           frame 23 protein.
          Length = 711

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +3

Query: 228 NNRETEMESFQEERSCSNPG---VHSLEAFERLSVW*QRSLQTKSHAQRSHNTLSAEKKE 398
           + R  ++E ++      NP     HSL  ++  +       QT  HA+R H   S+  K 
Sbjct: 218 SKRPKDVERYESREPARNPKWKPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKV 277

Query: 399 IFRIRHK 419
            +  RHK
Sbjct: 278 SYDYRHK 284


>AL772197-4|CAH71713.1|  682|Homo sapiens chromosome X open reading
           frame 23 protein.
          Length = 682

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +3

Query: 228 NNRETEMESFQEERSCSNPG---VHSLEAFERLSVW*QRSLQTKSHAQRSHNTLSAEKKE 398
           + R  ++E ++      NP     HSL  ++  +       QT  HA+R H   S+  K 
Sbjct: 218 SKRPKDVERYESREPARNPKWKPEHSLPPYQEDTDQWNLGPQTYRHAEREHPETSSATKV 277

Query: 399 IFRIRHK 419
            +  RHK
Sbjct: 278 SYDYRHK 284


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.316    0.131    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,528,278
Number of Sequences: 237096
Number of extensions: 1580044
Number of successful extensions: 3603
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3603
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)