Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14m10
(503 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68303-3|CAA92638.1| 248|Caenorhabditis elegans Hypothetical pr... 28 3.3
U39851-4|AAZ32803.1| 572|Caenorhabditis elegans Hypothetical pr... 28 4.4
U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned expre... 28 4.4
U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned expre... 28 4.4
U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned expre... 28 4.4
U23521-4|AAC46816.4| 389|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm rece... 27 5.8
Z46794-5|CAA86784.1| 381|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z46794-4|CAA86775.1| 378|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z22176-5|CAA80134.1| 278|Caenorhabditis elegans Hypothetical pr... 27 7.7
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 7.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 7.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 7.7
AC087232-2|AAK09076.4| 401|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z68303-3|CAA92638.1| 248|Caenorhabditis elegans Hypothetical
protein ZK809.2 protein.
Length = 248
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 501 NHFDIGSDPLIWCVWSFFSFPRY 433
NH DPL+WC+ F F RY
Sbjct: 43 NHRSNIDDPLMWCILKFREFWRY 65
>U39851-4|AAZ32803.1| 572|Caenorhabditis elegans Hypothetical
protein C23G10.7b protein.
Length = 572
Score = 27.9 bits (59), Expect = 4.4
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 88 KKQRTDSGSDKNYQLQNKMGLVN-SKDFLKKKVDEATSNSSLSNLRY-VITEKPKWKVFK 261
KK D L+N+ + + S + KKV +AT+ L + R V+ ++ WK K
Sbjct: 485 KKLMKDQDGGLQTFLRNQHQIFHVSTTAIDKKVYQATAR--LRDFRQPVVQKRQSWKPKK 542
Query: 262 KREAVAIPAYTALKPLKGCPCG 327
P + +L GCP G
Sbjct: 543 AETIRKAPCWMSLHHPDGCPVG 564
>U29379-7|ABC71826.1| 710|Caenorhabditis elegans Patterned
expression site protein22, isoform c protein.
Length = 710
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 184 DEATS-NSSLSNLRYVITEKPKWKVFKKREAVAIPAYTALKPLKGCPCGNSG 336
DEA S N + LR ++TE + K +A + ++TA + K NSG
Sbjct: 303 DEAVSQNPEVQRLRSILTEGDEGSETPKSDAHKVRSHTATRSRKHTMTSNSG 354
>U29379-6|AAF99981.3| 677|Caenorhabditis elegans Patterned
expression site protein22, isoform a protein.
Length = 677
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 184 DEATS-NSSLSNLRYVITEKPKWKVFKKREAVAIPAYTALKPLKGCPCGNSG 336
DEA S N + LR ++TE + K +A + ++TA + K NSG
Sbjct: 248 DEAVSQNPEVQRLRSILTEGDEGSETPKSDAHKVRSHTATRSRKHTMTSNSG 299
>U29379-5|ABC71825.1| 777|Caenorhabditis elegans Patterned
expression site protein22, isoform b protein.
Length = 777
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 184 DEATS-NSSLSNLRYVITEKPKWKVFKKREAVAIPAYTALKPLKGCPCGNSG 336
DEA S N + LR ++TE + K +A + ++TA + K NSG
Sbjct: 303 DEAVSQNPEVQRLRSILTEGDEGSETPKSDAHKVRSHTATRSRKHTMTSNSG 354
>U23521-4|AAC46816.4| 389|Caenorhabditis elegans Hypothetical
protein F41C3.11 protein.
Length = 389
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 338 LANKKSRPKESQYIIRRKKRNFPHSAQNLDGT 433
L NKK +PK+ ++RRK P ++N+ T
Sbjct: 82 LRNKKKKPKQVHPVLRRKDVGVPVISENVKET 113
>AF101318-4|AAC69346.1| 337|Caenorhabditis elegans Seven tm
receptor protein 68 protein.
Length = 337
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 143 ILFCNW*FLSLPESVLCFLH*AFGHFVLIIFSLSFSVFAYKFDCL 9
+LF + L+LP V+C + +G ++I S F Y++ CL
Sbjct: 72 LLFFSVTTLNLPREVICLMISLWGGCWIVIVSFIAVQFVYRYLCL 116
>Z46794-5|CAA86784.1| 381|Caenorhabditis elegans Hypothetical
protein R06F6.5b protein.
Length = 381
Score = 27.1 bits (57), Expect = 7.7
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Frame = +1
Query: 196 SNSSLSNLRYVITEKPKWKVFKKREAVAIPAYTALKPLK--GCPCGN-------SGPCKQ 348
+NSS+SN + + +F KR+A +YTA PL PC + + P
Sbjct: 19 NNSSISNFGTPVEQSTPALLFGKRKATVPSSYTA-SPLNTASAPCSDIFAVSAPAVPQHL 77
Query: 349 KVTPKGVTIHYPQKKKKFSAFGTKSRRNIPGKTEKG 456
K TP ++H+ + +N P G
Sbjct: 78 KDTPGSKSVHWSPSLVQSGEKSAAQTQNTPANLSFG 113
>Z46794-4|CAA86775.1| 378|Caenorhabditis elegans Hypothetical
protein R06F6.5a protein.
Length = 378
Score = 27.1 bits (57), Expect = 7.7
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Frame = +1
Query: 196 SNSSLSNLRYVITEKPKWKVFKKREAVAIPAYTALKPLK--GCPCGN-------SGPCKQ 348
+NSS+SN + + +F KR+A +YTA PL PC + + P
Sbjct: 19 NNSSISNFGTPVEQSTPALLFGKRKATVPSSYTA-SPLNTASAPCSDIFAVSAPAVPQHL 77
Query: 349 KVTPKGVTIHYPQKKKKFSAFGTKSRRNIPGKTEKG 456
K TP ++H+ + +N P G
Sbjct: 78 KDTPGSKSVHWSPSLVQSGEKSAAQTQNTPANLSFG 113
>Z22176-5|CAA80134.1| 278|Caenorhabditis elegans Hypothetical
protein ZK1098.6 protein.
Length = 278
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 115 DKNYQLQNKMGLVNSKDFLKKKVDEATSNSSLSNLRYVITEKPKWKVFKKRE 270
D+N + ++ +D LKKKVD+ + + +Y + ++ KKRE
Sbjct: 83 DQNQNSEEMKLILKERDELKKKVDQKSKETVHWTKKYYKLKAYGQEILKKRE 134
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 115 DKNYQLQNKMGLVNSKDFLKKKVDEATSNSSLSNL-RYVITEKPKWKVFKKR 267
+K Q Q+K+ + K K+K++ T + + + EKPK KV KK+
Sbjct: 9941 EKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKESVDEKPKKKVLKKK 9992
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 115 DKNYQLQNKMGLVNSKDFLKKKVDEATSNSSLSNL-RYVITEKPKWKVFKKR 267
+K Q Q+K+ + K K+K++ T + + + EKPK KV KK+
Sbjct: 9961 EKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKESVDEKPKKKVLKKK 10012
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 115 DKNYQLQNKMGLVNSKDFLKKKVDEATSNSSLSNL-RYVITEKPKWKVFKKR 267
+K Q Q+K+ + K K+K++ T + + + EKPK KV KK+
Sbjct: 9961 EKLAQEQSKLEVDAKKSAEKQKLESETKSKKTEEAPKESVDEKPKKKVLKKK 10012
>AC087232-2|AAK09076.4| 401|Caenorhabditis elegans Hypothetical
protein Y92H12BR.6 protein.
Length = 401
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/47 (23%), Positives = 28/47 (59%)
Frame = +2
Query: 26 MQTLKMKVKK*SIQNDRKLNARNKELIQGAIKITNCKIKWVWSIVKT 166
+ TL + ++K I ++++ +++L + ++++ KI W W +V T
Sbjct: 119 VNTLPLSIRKYWIDQKKEISEISEKLRRLFPELSHDKILWAWHVVNT 165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.131 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,050,070
Number of Sequences: 27780
Number of extensions: 260025
Number of successful extensions: 792
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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