Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14m09
         (655 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802...    30   1.4  
05_07_0340 + 29389314-29389627,29389966-29390112,29390654-293907...    30   1.9  
01_05_0217 - 19390788-19391048,19392205-19392438,19393474-193937...    30   1.9  
05_03_0168 - 9116648-9117775,9118699-9118885,9119724-9119821,911...    28   5.6  
10_08_1052 - 22567937-22568329,22568436-22568669,22568787-225691...    27   9.9  

>11_02_0073 -
           8020401-8020512,8020594-8020679,8020761-8020921,
           8021196-8021400,8021664-8021697,8022352-8022422,
           8023363-8023542,8023625-8023765,8023859-8023975,
           8024074-8024469
          Length = 500

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = +3

Query: 42  SFFKAIYFVKYLSTICFVF-----LFYFYKMKTVKTQSMRSVRSAKSLKSIKSAHDD 197
           S +K  YF   L + C V+      FYFY +KT+  +++    S + +K I   H +
Sbjct: 284 SEWKEAYFFLKLDSSCLVWSQSHSYFYFYMVKTIYVKNLPENASKEKIKEIFEKHGE 340


>05_07_0340 +
           29389314-29389627,29389966-29390112,29390654-29390789,
           29391098-29391199,29391801-29391920,29392033-29392113,
           29392578-29392918,29393069-29393314,29394195-29394519,
           29395123-29395356,29395437-29395691
          Length = 766

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -2

Query: 309 VIYHFENFFLLQQGKDKEIVLSP 241
           +I+H +NFFL++  KD+E  + P
Sbjct: 535 IIFHLKNFFLVKTEKDREEAMDP 557


>01_05_0217 -
           19390788-19391048,19392205-19392438,19393474-19393798,
           19395781-19396121,19396422-19396502,19396640-19396759,
           19397028-19397129,19397811-19397946,19398508-19398654,
           19399024-19399337
          Length = 686

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -2

Query: 309 VIYHFENFFLLQQGKDKEIVLSP 241
           +I+H +NFFL++  KD+E  + P
Sbjct: 453 IIFHLKNFFLVKTEKDREEAMDP 475


>05_03_0168 -
           9116648-9117775,9118699-9118885,9119724-9119821,
           9119948-9120114,9122242-9122578
          Length = 638

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 156 SAKSLKSIKSAHDDSVDPKVMEFKDYIEMATKQFLCPC 269
           S+++++ +KS H     P+ M       +A    LCPC
Sbjct: 423 SSQAMQDLKSGHMTLTSPRAMVTGQIFGVAVGSILCPC 460


>10_08_1052 -
           22567937-22568329,22568436-22568669,22568787-22569111,
           22569239-22569484,22569576-22569916,22570070-22570150,
           22570275-22570394,22570549-22570650,22570900-22571035,
           22571210-22571362,22572605-22572906
          Length = 810

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 309 VIYHFENFFLLQQGKDKEIVLSP 241
           VIYH +N F+++  +D+E  + P
Sbjct: 533 VIYHLKNMFIVKTERDRERAMDP 555


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,715,401
Number of Sequences: 37544
Number of extensions: 238962
Number of successful extensions: 633
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)