Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14m03
         (644 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    29   0.038
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.5  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 29.1 bits (62), Expect = 0.038
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
 Frame = +2

Query: 221 PATS*IFLTYFIVIYFKMMTRSIKSRQVDEQLRIALEQLKNTRE--KYDILLQESEQ 385
           P+TS I + YFI +YF  +   ++ R+   +L   LE  +   E  KYD L ++ E+
Sbjct: 12  PSTSFILINYFIFLYFNSL---VRFRRFTIELDKVLESPRGKYEFSKYDKLKKKLEE 65



 Score = 23.0 bits (47), Expect = 2.5
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 538 TKFITALRKGVNRILQLLIDLKSFTVFNEELRQLFF 431
           T  +  L  G + I+ LLI  KSF++ N  L  LFF
Sbjct: 121 TPLLKKLYGGNSTIIFLLIRFKSFSLLNFNL--LFF 154


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 644 EAAVP*VYITLTASQKYNHQPQPIYVSTQQ 555
           E  VP   + +    K++HQ +PI +S  Q
Sbjct: 527 EQNVPGAVVRVFLGPKHDHQGRPISISKNQ 556


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,204
Number of Sequences: 438
Number of extensions: 2395
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)