Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14m01
(376 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC108741-1|AAI08742.1| 394|Homo sapiens RRBP1 protein protein. 28 8.6
BC009700-1|AAH09700.1| 304|Homo sapiens Unknown (protein for IM... 28 8.6
AL132765-6|CAC10587.1| 977|Homo sapiens ribosome binding protei... 28 8.6
AL132765-5|CAM20086.1| 300|Homo sapiens ribosome binding protei... 28 8.6
AL132765-4|CAH74034.1| 1410|Homo sapiens ribosome binding protei... 28 8.6
AF006751-1|AAC25977.1| 977|Homo sapiens ES/130 protein. 28 8.6
AB287347-1|BAF73807.1| 1540|Homo sapiens p180/ribosome receptor ... 28 8.6
AB037819-1|BAA92636.2| 1586|Homo sapiens KIAA1398 protein protein. 28 8.6
>BC108741-1|AAI08742.1| 394|Homo sapiens RRBP1 protein protein.
Length = 394
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 170 TLRQIRFPSDLDKARRELR*YEVHEAESHKD*KRIRK---TKGPYENRTNVVPLHDPRGN 340
++++ + L R+E+ + E K K + K TK E +P HDP N
Sbjct: 32 SMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTVEKKGKTKKKEEKPNGKIPDHDPAPN 91
Query: 341 VTI 349
VT+
Sbjct: 92 VTV 94
>BC009700-1|AAH09700.1| 304|Homo sapiens Unknown (protein for
IMAGE:3900104) protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 170 TLRQIRFPSDLDKARRELR*YEVHEAESHKD*KRIRK---TKGPYENRTNVVPLHDPRGN 340
++++ + L R+E+ + E K K + K TK E +P HDP N
Sbjct: 32 SMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTVEKKGKTKKKEEKPNGKIPDHDPAPN 91
Query: 341 VTI 349
VT+
Sbjct: 92 VTV 94
>AL132765-6|CAC10587.1| 977|Homo sapiens ribosome binding protein 1
homolog 180kDa (dog) protein.
Length = 977
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 170 TLRQIRFPSDLDKARRELR*YEVHEAESHKD*KRIRK---TKGPYENRTNVVPLHDPRGN 340
++++ + L R+E+ + E K K + K TK E +P HDP N
Sbjct: 32 SMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTVEKKGKTKKKEEKPNGKIPDHDPAPN 91
Query: 341 VTI 349
VT+
Sbjct: 92 VTV 94
>AL132765-5|CAM20086.1| 300|Homo sapiens ribosome binding protein 1
homolog 180kDa (dog) protein.
Length = 300
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 170 TLRQIRFPSDLDKARRELR*YEVHEAESHKD*KRIRK---TKGPYENRTNVVPLHDPRGN 340
++++ + L R+E+ + E K K + K TK E +P HDP N
Sbjct: 32 SMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTVEKKGKTKKKEEKPNGKIPDHDPAPN 91
Query: 341 VTI 349
VT+
Sbjct: 92 VTV 94
>AL132765-4|CAH74034.1| 1410|Homo sapiens ribosome binding protein 1
homolog 180kDa (dog) protein.
Length = 1410
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 170 TLRQIRFPSDLDKARRELR*YEVHEAESHKD*KRIRK---TKGPYENRTNVVPLHDPRGN 340
++++ + L R+E+ + E K K + K TK E +P HDP N
Sbjct: 32 SMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTVEKKGKTKKKEEKPNGKIPDHDPAPN 91
Query: 341 VTI 349
VT+
Sbjct: 92 VTV 94
>AF006751-1|AAC25977.1| 977|Homo sapiens ES/130 protein.
Length = 977
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 170 TLRQIRFPSDLDKARRELR*YEVHEAESHKD*KRIRK---TKGPYENRTNVVPLHDPRGN 340
++++ + L R+E+ + E K K + K TK E +P HDP N
Sbjct: 32 SMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTVEKKGKTKKKEEKPNGKIPDHDPAPN 91
Query: 341 VTI 349
VT+
Sbjct: 92 VTV 94
>AB287347-1|BAF73807.1| 1540|Homo sapiens p180/ribosome receptor
protein.
Length = 1540
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 170 TLRQIRFPSDLDKARRELR*YEVHEAESHKD*KRIRK---TKGPYENRTNVVPLHDPRGN 340
++++ + L R+E+ + E K K + K TK E +P HDP N
Sbjct: 32 SMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTVEKKGKTKKKEEKPNGKIPDHDPAPN 91
Query: 341 VTI 349
VT+
Sbjct: 92 VTV 94
>AB037819-1|BAA92636.2| 1586|Homo sapiens KIAA1398 protein protein.
Length = 1586
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +2
Query: 170 TLRQIRFPSDLDKARRELR*YEVHEAESHKD*KRIRK---TKGPYENRTNVVPLHDPRGN 340
++++ + L R+E+ + E K K + K TK E +P HDP N
Sbjct: 58 SMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTVEKKGKTKKKEEKPNGKIPDHDPAPN 117
Query: 341 VTI 349
VT+
Sbjct: 118 VTV 120
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,348,366
Number of Sequences: 237096
Number of extensions: 930978
Number of successful extensions: 1996
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1996
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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