Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14l24
         (613 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-P...    29   3.7  
AE014297-4148|AAF56725.2| 1497|Drosophila melanogaster CG5586-PB...    29   4.9  

>AE014297-2608|AAF55620.3| 1788|Drosophila melanogaster CG31043-PA,
           isoform A protein.
          Length = 1788

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 444 RKMSTEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTS 560
           RK+  + +NT A ++Q  +E++D    NG +  ASN TS
Sbjct: 505 RKVRGKRRNTIAGIDQ--KEIQDAANGNGESKNASNATS 541


>AE014297-4148|AAF56725.2| 1497|Drosophila melanogaster CG5586-PB
           protein.
          Length = 1497

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 20/67 (29%), Positives = 26/67 (38%)
 Frame = +3

Query: 402 SKGYIPATRRQLV*RKMSTEAQNTDAAVEQVTQEVKDVKLENGNAPGASNGTSSKSEDNA 581
           S G  P  R +      S E+Q   AA  Q T  +      NG+ PG S   S       
Sbjct: 795 SAGLSPLARAESYDDDSSNESQEAGAAGSQSTTVLLHQAPSNGSGPGPSCSKSITRPKTI 854

Query: 582 LSFKEAF 602
            SFK ++
Sbjct: 855 SSFKNSY 861


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,123,668
Number of Sequences: 53049
Number of extensions: 418247
Number of successful extensions: 1274
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)