Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14l14
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredox... 28 1.4
SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyc... 27 3.3
SPCC18B5.09c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 27 3.3
SPCC1183.10 |wtf10||wtf element Wtf10|Schizosaccharomyces pombe|... 26 4.3
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.7
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 26 5.7
SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator ... 25 7.5
SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces ... 25 9.9
SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces ... 25 9.9
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 25 9.9
>SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredoxin
Etp1/ cytochrome oxidase cofactor Cox15,
fusion|Schizosaccharomyces pombe|chr 1|||Manual
Length = 631
Score = 27.9 bits (59), Expect = 1.4
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -1
Query: 486 ETAWKTHYSWSKHMSTP*YCSST*CINNHLLPSWIHYYTFRPSF 355
E A K SW+K +S+P S I++ +L ++TFRPSF
Sbjct: 467 EYALKNIRSWTKLISSPPKSS----ISSSILTQQRQFHTFRPSF 506
>SPAC824.05 |vps16||HOPS complex subunit Vps16 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 835
Score = 26.6 bits (56), Expect = 3.3
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +1
Query: 340 DCLILERWSESVIVDPTGKEVIVDALCAAAVLRGAHVFAPGVMGLPSSLHLDEKVDIYGD 519
D + +E+W+ S+ P G E V + +A + A + P L + +D V + GD
Sbjct: 735 DWVQIEQWAGSMRRSPIGFEPFVTEILSAGNKKEAAKYIPRCTQLTTQEKVDMWVQV-GD 793
Query: 520 LEKKCKRGLKS 552
++ + KS
Sbjct: 794 VKSASEEAAKS 804
>SPCC18B5.09c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 116
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 259 ESLQQYLLQQADVFATKQIPSFYFLKPDCLILERWSESV 375
ES Y+L ++ T+++ YF +PD +I W +S+
Sbjct: 21 ESHSTYILSAQGLYLTERVLRSYFKQPDLII--TWKDSM 57
>SPCC1183.10 |wtf10||wtf element Wtf10|Schizosaccharomyces pombe|chr
3|||Manual
Length = 258
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 196 WLMETPKYTTFRVNILKKNHHESLQQ 273
++ ET K + RVN+++K HE+ QQ
Sbjct: 215 FIAETVKPGSIRVNLIRKMGHEAKQQ 240
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2685
Score = 25.8 bits (54), Expect = 5.7
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 190 QKWLMETPKYTTFRVNILKKNHHESLQQY 276
+KWL+ T TF + + N H SL +
Sbjct: 532 KKWLINTSDLITFSLGYICNNDHGSLNMF 560
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 25.8 bits (54), Expect = 5.7
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -2
Query: 671 DTGIKVCTAIPLGLIPLSNNSDRNIFKYPVPTY 573
D+ +K+C ++ +GL+ +SN + N + + + TY
Sbjct: 1040 DSALKICKSLSVGLLDISNWDEWNNY-FDLNTY 1071
>SPAC4F10.04 |||protein phosphatase type 2A, intrinsic regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 325
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 668 TGIKVCTAIPLGLIPLSNNSDRNIFKYPVPTYFFFPSYNDFNPLL 534
T + + + + GLI + + + KYPV +F F + FNPL+
Sbjct: 281 TAVPIWSKVNQGLIKMYDVEV--LSKYPVVQHFHFGNLFPFNPLV 323
>SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 846
Score = 25.0 bits (52), Expect = 9.9
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = -2
Query: 644 IPLGLIPLSNNSDRNIF-KYPVPTYF---FFPSYNDFNPLLHFFSRSP 513
IP+ + PLSNN+ + K P TYF S + +PL F+R P
Sbjct: 643 IPIAMSPLSNNALFLAYDKNPFLTYFKRGLNVSLSTDDPLQFAFTREP 690
>SPBC24C6.06 |gpa1||G-protein alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -3
Query: 541 LFCISFQGHHKCLLFHLNGDCLEDPLLL 458
LF +S G+ +CL+ +G+ +++ LLL
Sbjct: 262 LFLVSLAGYDQCLVEDNSGNQMQEALLL 289
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 415 LCAAAVLRGAHVFAPGVMGLPSSLHLDEKVDIYGDLEK 528
L A AV+RG +APG +P+ + D+Y ++K
Sbjct: 432 LMALAVVRGIREYAPGYENIPAFIKWPN--DVYVRVDK 467
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,872,336
Number of Sequences: 5004
Number of extensions: 63142
Number of successful extensions: 161
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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