Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14l11
(596 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces pom... 29 0.68
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 28 1.2
SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4 desaturase... 27 2.1
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 27 2.7
SPAC12G12.02 ||SPAC630.01c|rRNA processing protein, unnamed|Schi... 26 3.6
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 26 4.8
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 25 8.4
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 25 8.4
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 25 8.4
>SPCC1442.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 177
Score = 28.7 bits (61), Expect = 0.68
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 375 NTAKSVIKKIPSTTKNTN--IQGKQELLRKKMRRIPESSEKNVLIHIRAMTNLLSSIK*E 548
+TA + + P T+KN ++ + +RK+ + E ++KN+ ++MT+ + ++
Sbjct: 107 STAATFMFCFPKTSKNIGAFVEKRFPAIRKQRMLVLEQTQKNIQNAQKSMTSAVEGVQKH 166
Query: 549 IKNLTSNXKMD 581
+N K D
Sbjct: 167 YENAVKKIKGD 177
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 27.9 bits (59), Expect = 1.2
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
Frame = +2
Query: 341 NSNAEDSRTVCKYGEKCYQKNPE---HHKKYKHPGQAGAFEKKNEKNPGKLREKRFNPYS 511
NSN + R+ + ++ Y + + Y+ + E+ + + R +RF+ Y
Sbjct: 331 NSNRDRKRSSSRSDDREYHRRSDGRYDRSNYRDDYRHRRKERDHRDDQSSFRNERFSNYY 390
Query: 512 SDDKP-AKQHKVGDKKPDIELXNGS 583
DD+ K+ G+K D L + S
Sbjct: 391 GDDRSYHKRRNTGNKNCDDHLRDKS 415
>SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4
desaturase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 362
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 205 LGTNIQIISVESKINNHLFCTFMISYYLCGLNVAYEF*LTLRHF 74
L T ++I ++ + FCTF + +Y V TL HF
Sbjct: 163 LPTRAELILFDNVLGKAFFCTFQLLFYAFRPLVVRRLPFTLMHF 206
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 408 STTKNTNIQGKQELLRKKMRRIPESSEKNVLIHIRAMTNLLSSIK 542
S K N++GKQ+LL + ++ E H+ + LLS ++
Sbjct: 231 SAKKLLNVEGKQKLLASEFLKLGERPGGFFRTHLITLYELLSEVR 275
>SPAC12G12.02 ||SPAC630.01c|rRNA processing protein,
unnamed|Schizosaccharomyces pombe|chr 1|||Manual
Length = 183
Score = 26.2 bits (55), Expect = 3.6
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +2
Query: 341 NSNAEDSRTVCKYGEKCYQKNPEHHKK--YKHPGQAGAFEKKNEKNPGKLREKRFNPYSS 514
N E R + E+ EH K+ ++ + FE+K + K EK +
Sbjct: 31 NIRVEHERALLGLQEQLSMAQLEHKKQKIFERYKKVRFFERKKAERRIKQLEKSLKDETM 90
Query: 515 DDKPAKQHKVGDKKPDIEL 571
DD+ KQ + +K I+L
Sbjct: 91 DDEKRKQCEKSMRKCQIDL 109
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 25.8 bits (54), Expect = 4.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -1
Query: 434 LDVCIFCGAR-DFFDNTFRRICIQFSNLQHLNYKLLTSL 321
L VC C A DN RR+ FS HL Y +L ++
Sbjct: 187 LQVCDICSAYLSRLDND-RRLADHFSGKMHLGYAMLRNI 224
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 25.0 bits (52), Expect = 8.4
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +3
Query: 375 NTAKSVIKKIPSTTKNTNIQGKQ----ELLRKKMRRIPESSEKNVLIHIRAMTNL 527
N K++ + I + N KQ E +KK P+ SEK +H+RA L
Sbjct: 581 NAVKTLDEDITPQSSNWQTVAKQIIFPEAYKKKDALRPDVSEKVFTVHVRANKRL 635
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 25.0 bits (52), Expect = 8.4
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 354 KIRELYANTAKSVIKKIPSTTKNTNIQGKQELLRKKMRRIPESSEKNVLIHIRAMTNLLS 533
++R+L + S K + K NI ++ KK +++ KN+ + LS
Sbjct: 305 ELRDLEKSGGSSNSKPVVVRPKKRNILTEELEKYKKSKKVVLGKRKNLENDEESTLRALS 364
Query: 534 SIK*EIKNLTSNXKMD 581
S + +I+N MD
Sbjct: 365 SFQSKIRNAEDEDVMD 380
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Frame = -2
Query: 523 FVIARIWIKTFFSELSGIL----LIFFLKSSCL 437
FV+ IWI T +E+ GIL +IF L S L
Sbjct: 589 FVLGIIWISTIANEVVGILRALGVIFNLNESIL 621
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,330,975
Number of Sequences: 5004
Number of extensions: 48929
Number of successful extensions: 178
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 260219058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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