Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14l10
(434 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 32 0.044
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 29 0.31
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 28 0.54
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 28 0.71
SPCC1223.10c |eaf1||RNA polymerase II transcription elongation f... 26 2.2
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 26 2.9
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 26 2.9
SPAPJ696.01c |vps17||retromer complex subunit Vps17|Schizosaccha... 25 3.8
SPBC646.14c |orc5||origin recognition complex subunit Orc5|Schiz... 25 5.0
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 25 5.0
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 25 5.0
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c... 25 5.0
SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual 24 8.8
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 24 8.8
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 24 8.8
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 24 8.8
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 31.9 bits (69), Expect = 0.044
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 164 TTPKINFSDTSQVSEGTEEGSATSTLPTTRKTIEKELRSQNTVPSRNMQRGVLDLLLPAY 343
TT +++F D + EG + G LP K +EK S P G+L LL+ Y
Sbjct: 983 TTLQVSFKDL--LLEGIDSGRIDRVLPFVCKVLEKASSSVIFKPPNPWLMGILKLLVELY 1040
Query: 344 RVKTFK 361
+ F+
Sbjct: 1041 QFADFR 1046
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 29.1 bits (62), Expect = 0.31
Identities = 22/92 (23%), Positives = 39/92 (42%)
Frame = +2
Query: 62 SDEPTLSTKDDIHISGMPTQFIEFQLPTKTDMSTTTPKINFSDTSQVSEGTEEGSATSTL 241
SD P+ S + S + + P K +TT+PK+N S+ T +
Sbjct: 396 SDHPS-SQDNSSKASLVENSQTQSSTPRKPLPTTTSPKVNPEPHSESISDTRPSTPRKVP 454
Query: 242 PTTRKTIEKELRSQNTVPSRNMQRGVLDLLLP 337
P+T + +L+ N+V + + VL + P
Sbjct: 455 PSTVPKMNPKLQGGNSVTAPSTPSKVLPAMSP 486
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 28.3 bits (60), Expect = 0.54
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 8 APSTVNFHDIYTNTLALLSDE-PTLSTKDDIHISGMPTQFIEFQLPTKTDMSTTTPKINF 184
A S+ F Y T + S P ST+ S T+ + P ++++T+T
Sbjct: 140 ATSSSEFFTSYPATSSESSSSYPASSTEVASSYSASSTE-VTSSYPASSEVATSTSSYVA 198
Query: 185 SDTSQVSEGTE--EGSATSTLPTTRKTI 262
+S V+ +E GSATS +PT+ +I
Sbjct: 199 PVSSSVASSSEISAGSATSYVPTSSSSI 226
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.9 bits (59), Expect = 0.71
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 73 NFKHKRRYPHQWHAHAIYRVPAAYQNRHVYNYSKN 177
NF KR Y ++H Y + YQ+ YN S N
Sbjct: 297 NFSEKRHYDRYGNSHPSYNKYSHYQHGFNYNNSGN 331
>SPCC1223.10c |eaf1||RNA polymerase II transcription elongation
factor SpEAF|Schizosaccharomyces pombe|chr 3|||Manual
Length = 251
Score = 26.2 bits (55), Expect = 2.2
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 155 MSTTTPK--INFSDTSQVSEGTEEGSATSTLPTTRKTIEKELRS 280
+S T P I SD SQ+SE + T +TR+ EKEL +
Sbjct: 109 VSKTVPSNAITQSDNSQISESKSTSQSAVTTNSTRRK-EKELEA 151
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 25.8 bits (54), Expect = 2.9
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 17 TVNFHDI-YTNTLALLSDEPTLSTKDDIHISGMPTQFIEFQLPTKTDMSTTTPKIN 181
T +FHD+ + LA L + LS + +++++ + QF+E + + + T K+N
Sbjct: 101 TSHFHDVNHLCRLANLEMQKELSIEVNMNVTLVQKQFLEMVILHLRNFESVTDKMN 156
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 25.8 bits (54), Expect = 2.9
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = +2
Query: 41 TNTLALLSDEPTLSTKDDIHISGMPTQFIEFQLPTKTDMSTTTPKINFSDTSQVSEGTEE 220
T T ++ PT T + I + T + T+T T TP + T+ V T
Sbjct: 1085 TGTTTVVIQTPTTVTATETDIVTVTTGYTG----TETSTVTVTPTGTATGTTTVVINTPT 1140
Query: 221 GSATSTLPTTRKT 259
+ + LPTT T
Sbjct: 1141 TTGSEVLPTTGAT 1153
>SPAPJ696.01c |vps17||retromer complex subunit
Vps17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 549
Score = 25.4 bits (53), Expect = 3.8
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
Frame = +2
Query: 35 IYTNTLALLSDEPTLSTKDDIHISGMPTQFIEFQLPTKTDMSTTTPKINFSDTSQVSEGT 214
I+T+ +S EP+ + ++G + F+ +T P S T + S +
Sbjct: 33 IHTDMPGSISVEPSSEDANVGSVNGNINETPVFEADRLIAEATMNPSAASSTTGENSI-S 91
Query: 215 EEGSATSTLPTTRKTIEKELRSQNTVPSRNMQRGVLDLLLPAYRVKTFKNVFDT---FRK 385
+ GS L IE E S++ V N+Q LPAYR K +KNV T F+K
Sbjct: 92 QTGSGPF-LRIRIVDIEAE-NSKDPVIKMNVQT-----TLPAYRSKLYKNVRRTHAEFKK 144
Query: 386 VLSY 397
Y
Sbjct: 145 FAKY 148
>SPBC646.14c |orc5||origin recognition complex subunit
Orc5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 455
Score = 25.0 bits (52), Expect = 5.0
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -3
Query: 300 LEGTVFCERNSFSIVFLVVGNVEVALPSSVPSLT*EVSEKFIFGVVVDMSVLVGSW-NSI 124
L+ VFC + + ++ N + +PS V ++ F+ D+S W N
Sbjct: 10 LKKNVFCREDQIKKLSCLLFNKDCRVPSIVLYGVASTAKTFLLRTAFDLSKEENVWINLQ 69
Query: 123 NCVGMPLMWISSFVLKVG 70
+C + W ++KVG
Sbjct: 70 DCFTVAHFWY-RILIKVG 86
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 25.0 bits (52), Expect = 5.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 156 MSVLVGSWNSINCVGMPLMWIS 91
MS L SWN ++ V + +WIS
Sbjct: 263 MSYLRHSWNRVDFVAIVALWIS 284
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 25.0 bits (52), Expect = 5.0
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +2
Query: 92 DIHISGMPTQFIEFQLPTKTDMSTTTPKINFSDTSQVSEGTEEGSATSTLPTTRKTIEKE 271
DIH + Q +E TD+ T K+N D SE ++ + K E
Sbjct: 594 DIHKDKLDQQAVEDLRSKITDLRETVAKVNAGDEGITSEDMKK-KIDEIQQLSLKVFESV 652
Query: 272 LRSQN 286
++QN
Sbjct: 653 YKNQN 657
>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 25.0 bits (52), Expect = 5.0
Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 116 TQFIEFQLPTKTDMST-TTPKINFSDTSQVSEGTEEGSATSTLPTTRKTIEKEL 274
T FI L + ST TP + S+ SEG E S ++T + + + L
Sbjct: 128 TPFINALLEASSTPSTYATPSRPTAQKSETSEGEPESSTSATTTSVARRTRQRL 181
>SPCC777.06c |||hydrolase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 301
Score = 24.2 bits (50), Expect = 8.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 282 KILFLRGICSAGC*IYCCLLIE 347
K+LF+ CS+G CCL +E
Sbjct: 7 KLLFMGTGCSSGIPNVCCLTLE 28
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 24.2 bits (50), Expect = 8.8
Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +2
Query: 101 ISGMPTQFIEFQL-PTKTDMSTTTPKINFSDTSQVSEGTEEGSATSTLPTTRKTIEKELR 277
+S P+ Q+ P T +T ++ S ++ + + TTRKT+ L
Sbjct: 761 VSSSPSGSFTSQISPAATTTATNLDAVSLSPSTVRTGSQISDIGNDAISTTRKTVRAFLE 820
Query: 278 SQNTVPSRN 304
+ N + N
Sbjct: 821 NANPYSTNN 829
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 24.2 bits (50), Expect = 8.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -1
Query: 371 RKHS*KSSLYKQAAVDLTPRAAYSSKEQYFV 279
RK S KSS K A D+ P+A S FV
Sbjct: 703 RKSSSKSSSAKSTAADMKPKADSKSISPGFV 733
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 24.2 bits (50), Expect = 8.8
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 146 KTDMSTTTPKINFSDTSQVSEGTEEGSATSTLPTTRKTIEKELRSQ-NTVPSRNMQ-RGV 319
K++ T +F+D S S + + ST P+ +++I K + + +T+ R +
Sbjct: 419 KSESYPATSTRSFNDISPSSSSSYSTAQISTFPSNQESIYKNINKRLSTLEERKKAFDEI 478
Query: 320 LDLLLPAYRVKTFKNV 367
++ +L Y KN+
Sbjct: 479 VEKILTNYGKHNAKNM 494
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,816,551
Number of Sequences: 5004
Number of extensions: 37268
Number of successful extensions: 136
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 156095170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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