Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14l10
         (434 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.21 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   7.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   7.9  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   7.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 23/88 (26%), Positives = 33/88 (37%)
 Frame = +2

Query: 11  PSTVNFHDIYTNTLALLSDEPTLSTKDDIHISGMPTQFIEFQLPTKTDMSTTTPKINFSD 190
           P +   + +Y   +    D    ST    H  G P   I     T T  +TTT       
Sbjct: 620 PRSTLRNKVYKLAMERERDASLSSTHSHPHEPGAPATTITTITTTTTTTTTTTT------ 673

Query: 191 TSQVSEGTEEGSATSTLPTTRKTIEKEL 274
           T+     T+  SAT+  P   +  +KEL
Sbjct: 674 TTTTPNTTQNASATTPPPQVDEVDDKEL 701


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 24  IFMTSTRTPWLCCLTN 71
           IF+     PW+C LTN
Sbjct: 228 IFVPVKPCPWICELTN 243


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 5/9 (55%), Positives = 6/9 (66%)
 Frame = +1

Query: 100 HQWHAHAIY 126
           H WH H +Y
Sbjct: 208 HHWHWHLVY 216


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 185 SDTSQVSEGTEEGSATSTLPTTRKTI 262
           SD S  S  T+E   +STL    K +
Sbjct: 228 SDNSDYSHTTDENRHSSTLDIDHKML 253


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 27  FMTSTRTPWLCCLT 68
           F+  TR P  CC T
Sbjct: 190 FVVPTRVPATCCTT 203


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,531
Number of Sequences: 438
Number of extensions: 2384
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)