Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14l09
         (390 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   2.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   2.9  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   5.0  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   6.6  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   6.6  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   6.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   6.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    20   8.7  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       20   8.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   8.7  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 58  TTAMARNIKDNNNIDPATLLSNVKST 135
           T + +   +D   +DP  ++SN KST
Sbjct: 430 TASGSNEDEDETPLDPVVVISNDKST 455


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -1

Query: 270  DCTQACLGDQTFGHICQQHKSM 205
            DCT A    QT  HI Q H  M
Sbjct: 1074 DCTMAEDVYQTLKHIIQTHGEM 1095


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +1

Query: 67  MARNIKDNNNIDPATLLSNVKSTIK 141
           + RN++ ++ +D  TLL++   +IK
Sbjct: 146 LIRNLRQSSALDGVTLLADNSVSIK 170


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -2

Query: 179 WKWFSNSSFITSF 141
           W W S SSF   F
Sbjct: 414 WMWLSCSSFFQQF 426


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 282 LCLFDCTQACLGDQTFG 232
           L LF CT +C+    +G
Sbjct: 301 LFLFACTNSCMNPIVYG 317


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 222 QQHKSMWGNLGF 187
           QQ  S WG LGF
Sbjct: 334 QQWNSYWGILGF 345


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 222 QQHKSMWGNLGF 187
           QQ  S WG LGF
Sbjct: 334 QQWNSYWGILGF 345


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 239 HLATSANNIRACGAILVLLSWKWFSNSSF 153
           ++ TS       G    +L+W  +SNS+F
Sbjct: 292 NIVTSYCKTCISGRAFQVLTWLGYSNSAF 320


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +1

Query: 139 KKDVIKELLE 168
           KKD++KE+LE
Sbjct: 434 KKDLLKEILE 443


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +2

Query: 26   LYFALKYSEIEQQQW 70
            +YF +++ +  QQ+W
Sbjct: 1492 IYFVVEHKKKNQQEW 1506


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,922
Number of Sequences: 438
Number of extensions: 1926
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9514659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)