Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14l04
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 37 0.014
AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical ... 34 0.076
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 33 0.17
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 33 0.17
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 33 0.17
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 33 0.17
AF002197-5|AAB53985.1| 341|Caenorhabditis elegans Malate dehydr... 32 0.30
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 31 0.93
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 31 0.93
U23524-3|AAC46823.2| 257|Caenorhabditis elegans Mirp k channel ... 30 1.2
U23524-2|ABD63241.1| 303|Caenorhabditis elegans Mirp k channel ... 30 1.2
AF541978-1|AAO65851.1| 256|Caenorhabditis elegans MPS-1 protein. 30 1.2
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 29 2.8
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 29 2.8
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z48334-3|CAA88310.1| 471|Caenorhabditis elegans Hypothetical pr... 28 5.0
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 28 5.0
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 28 5.0
U39678-5|ABP49528.1| 213|Caenorhabditis elegans Hypothetical pr... 28 5.0
U39678-4|AAK39211.2| 330|Caenorhabditis elegans Hypothetical pr... 28 5.0
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 28 5.0
AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical ... 28 5.0
Z77652-6|CAB01122.1| 357|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 28 6.6
AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical ... 28 6.6
AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical... 28 6.6
AF125956-5|AAD14722.2| 353|Caenorhabditis elegans Serpentine re... 27 8.7
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +2
Query: 335 RRVSCKEEEKLPPKKVDTETKALPP----PSRPAKVPSMPETRSGVQV-SILGADSPL 493
R +S + EEK+P +KVDT + PP P+ P K+P+ + R+ + +GA P+
Sbjct: 2837 RPLSAESEEKVPVEKVDTPSPLTPPAASVPAPPPKMPADQQWRAAMMARRYMGASKPV 2894
>AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical
protein Y55B1BR.2 protein.
Length = 740
Score = 34.3 bits (75), Expect = 0.076
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 251 RIKKKKPGLLHR-IKLRVIEGGTNFGTPFRRVSCKEEEKLPPKKVDTETKALPPPSRPAK 427
RIK KP + + I+L G T V K EK+ K+ + LPPP RP
Sbjct: 228 RIKALKPERVQKLIELAKTRGKL---TDVVEVEKKVVEKVVEKQEKRVLEPLPPPPRPPS 284
Query: 428 VPSMPETRSGVQVSILGADS 487
VP++P + + ILG S
Sbjct: 285 VPAVPAVPTPSRDPILGPGS 304
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2
Query: 323 GTPFRRVSCKEEEKLPPKKVDTETKALPPPSRPAKVPSMPE 445
GTP RRVS EEE LP + +D++ K PS P K PE
Sbjct: 1349 GTPKRRVSFAEEE-LPKEVIDSDRKKKKSPS-PDKKEKSPE 1387
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/88 (25%), Positives = 33/88 (37%)
Frame = +2
Query: 227 PKCPQPCERIKKKKPGLLHRIKLRVIEGGTNFGTPFRRVSCKEEEKLPPKKVDTETKALP 406
PK P KK+K +K + + +P ++ ++ P KK E K
Sbjct: 1407 PKEKSPASPTKKEKSPAAEEVKSPTKKEKSP-SSPTKK---EKSPSSPTKKTGDEVKEKS 1462
Query: 407 PPSRPAKVPSMPETRSGVQVSILGADSP 490
PP P K PE V+ + SP
Sbjct: 1463 PPKSPTKKEKSPEKPEDVKSPVKKEKSP 1490
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2
Query: 323 GTPFRRVSCKEEEKLPPKKVDTETKALPPPSRPAKVPSMPE 445
GTP RRVS EEE LP + +D++ K PS P K PE
Sbjct: 1349 GTPKRRVSFAEEE-LPKEVIDSDRKKKKSPS-PDKKEKSPE 1387
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/88 (25%), Positives = 33/88 (37%)
Frame = +2
Query: 227 PKCPQPCERIKKKKPGLLHRIKLRVIEGGTNFGTPFRRVSCKEEEKLPPKKVDTETKALP 406
PK P KK+K +K + + +P ++ ++ P KK E K
Sbjct: 1407 PKEKSPASPTKKEKSPAAEEVKSPTKKEKSP-SSPTKK---EKSPSSPTKKTGDEVKEKS 1462
Query: 407 PPSRPAKVPSMPETRSGVQVSILGADSP 490
PP P K PE V+ + SP
Sbjct: 1463 PPKSPTKKEKSPEKPEDVKSPVKKEKSP 1490
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2
Query: 323 GTPFRRVSCKEEEKLPPKKVDTETKALPPPSRPAKVPSMPE 445
GTP RRVS EEE LP + +D++ K PS P K PE
Sbjct: 1349 GTPKRRVSFAEEE-LPKEVIDSDRKKKKSPS-PDKKEKSPE 1387
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/88 (25%), Positives = 33/88 (37%)
Frame = +2
Query: 227 PKCPQPCERIKKKKPGLLHRIKLRVIEGGTNFGTPFRRVSCKEEEKLPPKKVDTETKALP 406
PK P KK+K +K + + +P ++ ++ P KK E K
Sbjct: 1407 PKEKSPASPTKKEKSPAAEEVKSPTKKEKSP-SSPTKK---EKSPSSPTKKTGDEVKEKS 1462
Query: 407 PPSRPAKVPSMPETRSGVQVSILGADSP 490
PP P K PE V+ + SP
Sbjct: 1463 PPKSPTKKEKSPEKPEDVKSPVKKEKSP 1490
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 33.1 bits (72), Expect = 0.17
Identities = 20/41 (48%), Positives = 24/41 (58%)
Frame = +2
Query: 323 GTPFRRVSCKEEEKLPPKKVDTETKALPPPSRPAKVPSMPE 445
GTP RRVS EEE LP + +D++ K PS P K PE
Sbjct: 1349 GTPKRRVSFAEEE-LPKEVIDSDRKKKKSPS-PDKKEKSPE 1387
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/88 (25%), Positives = 33/88 (37%)
Frame = +2
Query: 227 PKCPQPCERIKKKKPGLLHRIKLRVIEGGTNFGTPFRRVSCKEEEKLPPKKVDTETKALP 406
PK P KK+K +K + + +P ++ ++ P KK E K
Sbjct: 1407 PKEKSPASPTKKEKSPAAEEVKSPTKKEKSP-SSPTKK---EKSPSSPTKKTGDEVKEKS 1462
Query: 407 PPSRPAKVPSMPETRSGVQVSILGADSP 490
PP P K PE V+ + SP
Sbjct: 1463 PPKSPTKKEKSPEKPEDVKSPVKKEKSP 1490
>AF002197-5|AAB53985.1| 341|Caenorhabditis elegans Malate
dehydrogenase protein 1 protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.30
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +2
Query: 434 SMPETRSGVQVSILGADSPLGHYVALLLKQCPCIKKLRLYEAKHCECSACNRNLCKVVKD 613
S+ + +V++LGA +G + LLLKQ P + L LY+ N V D
Sbjct: 21 SVRHSSQAPKVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVV---------NTPGVAAD 71
Query: 614 LXHINXNCLV 643
L HI+ N V
Sbjct: 72 LSHIDSNAKV 81
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 359 EKLPPKKVDTETKALPPPSRPAKV 430
+ +PP V T T+ PPP+RPA V
Sbjct: 606 QPVPPMSVATVTRGPPPPTRPASV 629
>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical
protein F31E3.4 protein.
Length = 1131
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -3
Query: 351 LHETRRNGVP--KFVPPSMTLNLILCNKPGFFFFIL 250
L T R G+P KF PSMT C+ PG FI+
Sbjct: 90 LRATTRQGIPVAKFTSPSMTKMAASCHMPGTSTFIM 125
>U23524-3|AAC46823.2| 257|Caenorhabditis elegans Mirp k channel
accessory subunitprotein 1, isoform a protein.
Length = 257
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 350 KEEEKLPPKKVDTETKALPPPSRPAKVPSMPETRSGVQVSILGAD 484
K +EK P K+ D+E K LP +RP S+ S + ++ AD
Sbjct: 114 KNKEKGPEKRKDSEWKPLPNGTRPRGHYSISTVTSDIPEIVVSAD 158
>U23524-2|ABD63241.1| 303|Caenorhabditis elegans Mirp k channel
accessory subunitprotein 1, isoform b protein.
Length = 303
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 350 KEEEKLPPKKVDTETKALPPPSRPAKVPSMPETRSGVQVSILGAD 484
K +EK P K+ D+E K LP +RP S+ S + ++ AD
Sbjct: 114 KNKEKGPEKRKDSEWKPLPNGTRPRGHYSISTVTSDIPEIVVSAD 158
>AF541978-1|AAO65851.1| 256|Caenorhabditis elegans MPS-1 protein.
Length = 256
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 350 KEEEKLPPKKVDTETKALPPPSRPAKVPSMPETRSGVQVSILGAD 484
K +EK P K+ D+E K LP +RP S+ S + ++ AD
Sbjct: 114 KNKEKGPEKRKDSEWKPLPNGTRPRGHYSISTVTSDIPEIVVSAD 158
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Frame = +2
Query: 242 PCERIKKKKPGLLHRIKLRVIEGGTNFG-----TPFRRVSCKEEEKLPPKKVDTETKALP 406
P E IK+ +P L+ E T+ +P ++V K+E ++PP + TK
Sbjct: 222 PTEEIKEPEPATRKVPALKKKEPSTSVKPVSDPSPTKKVPVKKEPEVPPTPIKNPTKKWK 281
Query: 407 P------PSRPAKVPSMPETRSGV 460
P P K P +PE ++ V
Sbjct: 282 PPWEDETPVEEVKEPPVPEKKAPV 305
>Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical
protein F02H6.7 protein.
Length = 334
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 446 TRSGVQVSILGADSPLGHYVALL---LKQCPCIKKLRLYEAKHCECSACN 586
T +GV + GA S L + L LK CPC+ R+ ++ C ACN
Sbjct: 72 TSNGVCATTCGACSNLNYTRTCLSDGLKNCPCVGSTRI--SQPCGTQACN 119
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 362 KLPPKKVDTETKALPPPSRPAKVPSMPET 448
++ P D E K PPP P K P +P++
Sbjct: 187 RMNPLNADAEWKPPPPPPMPGKPPIVPQS 215
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 362 KLPPKKVDTETKALPPPSRPAKVPSMPET 448
++ P D E K PPP P K P +P++
Sbjct: 187 RMNPLNADAEWKPPPPPPMPGKPPIVPQS 215
>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +2
Query: 191 RRALVDIPPDVDPKCPQPCERIKKKKPGLLH------RIKLRVIEGGTNFGTPFRRVSCK 352
RR++ D P D + K + C KK+ + +++ R++E ++ R SC
Sbjct: 999 RRSVGDTPID-NEKEERECRSNTKKQRKVAENEKNPSKLRRRLLEASSDKSDKDERTSCP 1057
Query: 353 EEEKLPPKKVDTETKALPPPSR 418
+K PK + E A PP+R
Sbjct: 1058 SSKK-RPKLAENEKNAASPPTR 1078
>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +2
Query: 191 RRALVDIPPDVDPKCPQPCERIKKKKPGLLH------RIKLRVIEGGTNFGTPFRRVSCK 352
RR++ D P D + K + C KK+ + +++ R++E ++ R SC
Sbjct: 999 RRSVGDTPID-NEKEERECRSNTKKQRKVAENEKNPSKLRRRLLEASSDKSDKDERTSCP 1057
Query: 353 EEEKLPPKKVDTETKALPPPSR 418
+K PK + E A PP+R
Sbjct: 1058 SSKK-RPKLAENEKNAASPPTR 1078
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 343 DAPKWSSEIRASFDDPQFNSM 281
D+P W S IR F+DPQ + +
Sbjct: 220 DSPTWISAIRQRFEDPQMDEV 240
>Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical
protein C05G5.2 protein.
Length = 685
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 374 KKVDTETKALPPPSRPAKVPSMPETRSGVQVSILGADS 487
KKV+T + PP +P ++P T+ + S+ +DS
Sbjct: 448 KKVETPKPSQPPQVKPTNHTAVPATKPVAKKSLFSSDS 485
>Z48334-3|CAA88310.1| 471|Caenorhabditis elegans Hypothetical
protein F10B5.3 protein.
Length = 471
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +2
Query: 203 VDIPPDVD---PKCPQPCERIKKKKPGLLHRIKLRVIEGGTNFGTPFRRVSCKEEEKLPP 373
+ +P ++D KCP C + K P +L + R GT+ GTP + ++K+ P
Sbjct: 310 IPLPENIDLGSRKCPF-CRHVSKS-PAMLEKHIARHETDGTSGGTPGALKRAQSKKKIVP 367
Query: 374 KK----VDTETKALPPPSRPA 424
+D ++ P+ PA
Sbjct: 368 TMTTDVIDPNVSSIFAPTNPA 388
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 365 LPPKKVDTETKALPPPSRPAKVPSMPETRSGVQVSI 472
LPP +V +T LPP +RP ++P + T+ +Q +
Sbjct: 352 LPPVQVPIQT--LPPQTRPPQLPPVQITQPPIQTPV 385
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 365 LPPKKVDTETKALPPPSRPAKVPSMPETRSGVQVSI 472
LPP +V +T LPP +RP ++P + T+ +Q +
Sbjct: 449 LPPVQVPIQT--LPPQTRPPQLPPVQITQPPIQTPV 482
>U39678-5|ABP49528.1| 213|Caenorhabditis elegans Hypothetical
protein C39D10.3b protein.
Length = 213
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 146 VFNRCYAKKSGDDECRRALVDIPPDVDPKCPQPCERIKKKK 268
V++ + ++ D R + ++ PD D C + ERI +K
Sbjct: 151 VYSETHPRRFADCTYHRIIEEVTPDYDATCEEILERITSRK 191
>U39678-4|AAK39211.2| 330|Caenorhabditis elegans Hypothetical
protein C39D10.3a protein.
Length = 330
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 146 VFNRCYAKKSGDDECRRALVDIPPDVDPKCPQPCERIKKKK 268
V++ + ++ D R + ++ PD D C + ERI +K
Sbjct: 268 VYSETHPRRFADCTYHRIIEEVTPDYDATCEEILERITSRK 308
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/70 (28%), Positives = 26/70 (37%)
Frame = +2
Query: 299 VIEGGTNFGTPFRRVSCKEEEKLPPKKVDTETKALPPPSRPAKVPSMPETRSGVQVSILG 478
VI T RR ++ + P V T + PP SRP V P S +
Sbjct: 80 VIRPATKAPNRMRRPPPRKLAQTPRPPVVTTQRPAPPQSRPPPVTRRPTFISTTTSKLST 139
Query: 479 ADSPLGHYVA 508
SP+ H A
Sbjct: 140 THSPIVHKTA 149
>AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical
protein H25P19.1 protein.
Length = 349
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +2
Query: 287 IKLRVIEGGTNFGTP-FRRVSCKEEEKLPPKKVDTETKALPPPSRPAKVPSMPETRSGVQ 463
+K R TP +S K PPK +K+ PP RP S+ + R G Q
Sbjct: 276 LKFRFTPSKLGTATPGISIISSPTPPKSPPKSTPRTSKST-PPKRPYLKRSLEQARGGAQ 334
Query: 464 VS 469
S
Sbjct: 335 KS 336
>Z77652-6|CAB01122.1| 357|Caenorhabditis elegans Hypothetical
protein C06B3.9 protein.
Length = 357
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 428 VPSMPETRSGVQVSILGADSPLGHYVALLLKQCPCI 535
VP + T S V++LG S L Y+ LLL + C+
Sbjct: 60 VPEIYTTGSAFLVTVLGGQSFLPTYLCLLLSELFCV 95
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 27.9 bits (59), Expect = 6.6
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = +2
Query: 218 DVDPKCPQPCERIK 259
D+ P CP+PCE+++
Sbjct: 896 DITPNCPEPCEKLE 909
>AC084158-1|AAK68563.2| 1256|Caenorhabditis elegans Hypothetical
protein Y69A2AR.19 protein.
Length = 1256
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 260 KKKPGLLHRIKLRVIEGGTNFGTPFRRVSCKEEEKLPP----KKVDTETKALPPPSRPAK 427
K G + +I + + +++GTP + + K+ K +D KALPPP R +
Sbjct: 726 KAAKGFVDKIDVSKAKTMSDYGTPLANLKDLPDVKINALEKIKALDALIKALPPPKR-KR 784
Query: 428 VPSMPET 448
S P+T
Sbjct: 785 ATSDPKT 791
>AC025716-14|AAK39603.1| 227|Caenorhabditis elegans Hypothetical
protein Y39G10AR.16 protein.
Length = 227
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 326 TPFRRVSCKEEEKLPPKKVDTETKALPPPSRPAKVPSMPETRSGVQVSILGADSP 490
TP + +E P A PPP PA V PE+++GV+ L + P
Sbjct: 154 TPPEKPKVEEPAPAPAPAPAAVAPAPPPPPEPAVV--QPESQAGVESIYLDSGKP 206
>AF125956-5|AAD14722.2| 353|Caenorhabditis elegans Serpentine
receptor, class h protein80 protein.
Length = 353
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 59 MNPSTVFIKSKHLWSCLLD 115
MN S V + + H WSCLLD
Sbjct: 58 MNNSKVSLLNFHFWSCLLD 76
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,660,361
Number of Sequences: 27780
Number of extensions: 331252
Number of successful extensions: 1219
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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