Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14l03
(468 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0334 - 3680612-3681266,3682253-3682374 29 1.4
05_04_0102 + 18013994-18014049,18014236-18014335,18014499-180147... 29 1.4
06_03_0237 + 18576317-18576412,18577273-18577778,18577906-185780... 29 1.9
08_01_0397 - 3509186-3510291,3510322-3512335 28 3.3
04_04_0394 + 24905501-24905673,24907824-24907868,24908412-249085... 28 3.3
01_05_0432 - 22087658-22087999 28 3.3
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 28 4.3
11_01_0366 + 2793732-2793838,2793944-2794979 28 4.3
03_03_0117 - 14583102-14583186,14585202-14585336,14585440-145856... 28 4.3
08_02_0113 - 12715888-12716181,12717443-12717602,12718327-127183... 27 5.7
10_05_0020 - 8094412-8094653,8094692-8095017,8095632-8095798 27 7.5
09_04_0245 + 15995689-15995742,15995979-15996075,15996165-159961... 27 7.5
01_06_0660 + 30969879-30970218,30970346-30970514,30971373-309716... 27 7.5
07_01_0847 + 6884862-6884902,6884943-6885546 27 10.0
06_03_0764 - 24414655-24414798,24415198-24415300,24415346-24415701 27 10.0
02_05_1082 - 33976038-33978035 27 10.0
>10_01_0334 - 3680612-3681266,3682253-3682374
Length = 258
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = +1
Query: 106 KRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYLSADLRARIR*CVRAPIRSQRAAALS 285
+RR A S +RT RS+RS RG+ C+ R R R R A+ +
Sbjct: 126 RRRVRAQPSAARTLAGRSWRSPRGAGSGRGCYR----------RGGSREGRRGARGASAA 175
Query: 286 QVTTGCCAG 312
GCC G
Sbjct: 176 AAVDGCCGG 184
>05_04_0102 +
18013994-18014049,18014236-18014335,18014499-18014783,
18014854-18015023,18015382-18015510,18016109-18016205,
18016318-18016395,18016474-18016635,18016673-18016771
Length = 391
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 181 TVASSCHGYLSADLRARIR*CVR 249
+VA+SC+GYL ADL+A R R
Sbjct: 68 SVAASCNGYLGADLQALCREAAR 90
>06_03_0237 +
18576317-18576412,18577273-18577778,18577906-18578024,
18578409-18578763,18578803-18578866,18578967-18579231,
18579354-18579529
Length = 526
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 413 INKLTRHKTND*QIYEITIMREKRAISTRLCGGLP 309
+NKL +HK + IT +EK A TR C G P
Sbjct: 352 MNKLVKHKR---MLEVITDRKEKEAAETRACSGKP 383
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +1
Query: 34 RETMAREKTNRRPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGST 183
RE +EK R RR + + RR A +DR + RR S+
Sbjct: 76 REEREKEKERERARRREERDREERSRRREAAAEEEEEDVDRDRKRRRRSS 125
>04_04_0394 +
24905501-24905673,24907824-24907868,24908412-24908513,
24908700-24908799,24908963-24909247,24909318-24909487,
24909846-24909974,24910332-24910428,24910541-24910618,
24910694-24911017
Length = 500
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 181 TVASSCHGYLSADLRARIR*CVR 249
+VA+SC+GY+ ADL+A R R
Sbjct: 156 SVAASCNGYVGADLQALCREAAR 178
>01_05_0432 - 22087658-22087999
Length = 113
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 349 RNARSVRGFVADCRRSSPSSPAITRPR 269
R AR++ V CR S PS+P RPR
Sbjct: 79 RRARAIVQAVTHCRLSRPSTPPPRRPR 105
>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -3
Query: 337 SVRGFVADCRRSSPSSPAI-TRPRVGS*LAR 248
++R VA CR S PS+ AI +RP GS + R
Sbjct: 1889 AIRRGVAGCRASPPSASAIVSRPATGSHILR 1919
>11_01_0366 + 2793732-2793838,2793944-2794979
Length = 380
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 79 RAKNISVQYKRR-EAAVQSPSRTTIDRSYRSRRGSTVASSCH 201
R+KN++V + + A + T D+ + + G TVA+ CH
Sbjct: 183 RSKNVTVLLDQTVDLAAAAAGANTDDKVFTTSAGETVAADCH 224
>03_03_0117 -
14583102-14583186,14585202-14585336,14585440-14585604,
14586168-14586245,14586796-14586941
Length = 202
Score = 27.9 bits (59), Expect = 4.3
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = +1
Query: 37 ETMAREKTNRRP-ARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRGSTVASSCHGYLS 213
E ARE+ R + ++ S +Y R + V SP + RSY SSC +
Sbjct: 122 EMRARERVGSRDRSYDRRSRSPRYSRSRSPVYSPRSRSRSRSYSPAPKRKHYSSCFAGDT 181
Query: 214 ADLRARIR*CVRAPIRSQ 267
R VR PI +Q
Sbjct: 182 DKFMILCRKSVRMPIEAQ 199
>08_02_0113 - 12715888-12716181,12717443-12717602,12718327-12718368,
12718443-12718465,12718616-12720653,12720736-12720965,
12722207-12722329,12722438-12723010,12724684-12724733,
12726828-12726923,12726987-12727394,12727609-12727795
Length = 1407
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +1
Query: 178 STVASSCHGYLSADLRARIR*CVRAPIRSQRAAALSQVTTGCCAGSPPQSLVLIA 342
S++ S G+ DL + ++ C+RA ++ + Q+ G SPP L A
Sbjct: 1283 SSLTSQTQGF---DLMSNLQFCIRAVTEMRQMMGVLQIDAGMLPSSPPWMLASCA 1334
>10_05_0020 - 8094412-8094653,8094692-8095017,8095632-8095798
Length = 244
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 53 RRQTEDQRGERRTSASSTKDEKRPYSHLPGLLSTVAIGLGGG 178
RR+ + + ER A + +RP S P +L+ I +GGG
Sbjct: 114 RRRLDVEHDERAVRAEAEVVGRRPLSSSPLVLTPACICVGGG 155
>09_04_0245 +
15995689-15995742,15995979-15996075,15996165-15996185,
15996442-15996573,15996707-15996834,15996919-15997203,
15997391-15997521,15999700-15999817,16000609-16000703,
16001437-16001511,16001860-16001911,16002767-16002859,
16003625-16003690,16003785-16003867,16003942-16004054,
16005271-16005410,16005569-16005643,16006084-16006160,
16006426-16006514,16008039-16008085,16009004-16009138,
16009298-16009345,16009605-16009667,16009709-16009730,
16010284-16010458,16014250-16014321,16014887-16014958,
16015904-16016005,16016197-16016225,16016333-16016403,
16016549-16016597,16016684-16016784,16017495-16017623,
16017683-16017752,16017975-16018194,16019368-16019389,
16019457-16019604,16021569-16021693,16022344-16022774,
16022984-16023110,16023241-16023292,16023351-16023502
Length = 1461
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 29 YHARRWQERRQTEDQRGERRTSASSTKDEKRPYSH 133
YH + +Q R+ + + + AS+TK K YS+
Sbjct: 12 YHVKYYQVRKMMRNNQNTQVEGASATKKRKTSYSN 46
>01_06_0660 +
30969879-30970218,30970346-30970514,30971373-30971635,
30971717-30971864,30972019-30972082,30972225-30972248
Length = 335
Score = 27.1 bits (57), Expect = 7.5
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 67 RPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSRRG--STVASSCHGYLSADLRARIR* 240
R + + ++S+ + + + S + TT ++RG TV GY +AR
Sbjct: 71 RLQQESPSLSLSFFPKHSKTTSSTTTTTG----AKRGFIDTVEDKTEGYNDQKQQARAG- 125
Query: 241 CVRAPIRSQRAAALSQVTTGCCAGSPP 321
C + + AA+S+ GCC PP
Sbjct: 126 CGKELAVEEMIAAVSERKKGCCPPPPP 152
>07_01_0847 + 6884862-6884902,6884943-6885546
Length = 214
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +3
Query: 18 QPAYITRDDGKREDKQKTSEASEEHQRPVQKTRSGRT 128
Q + D G +DKQ+ A HQR T RT
Sbjct: 161 QDGLTSTDSGTEDDKQQRPPARASHQRRGDNTNPKRT 197
>06_03_0764 - 24414655-24414798,24415198-24415300,24415346-24415701
Length = 200
Score = 26.6 bits (56), Expect = 10.0
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 22 LPISRETMAREKTNRRPARRAKNISVQYKRREAAVQSPSRTTIDRSYRSR 171
LP R T AR++ ++ A I+V R + A +SPSRT I+ R +
Sbjct: 83 LPAFRRTSARQR--KKSASSTMQITV---RPDPAYESPSRTRINTRVRDQ 127
>02_05_1082 - 33976038-33978035
Length = 665
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 98 TLMFFARLAGLLFVFSLAIVSRDIGR 21
+LM A LAG++FV L V RD+ R
Sbjct: 304 SLMVIAFLAGIVFVILLRTVRRDLTR 329
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,292,669
Number of Sequences: 37544
Number of extensions: 261804
Number of successful extensions: 1089
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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