Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14l03
         (468 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.2  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    22   3.8  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   6.6  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   8.7  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   8.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.7  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 346 NARSVRGFVADCRRSSPSSPAITRPRVGS 260
           +A+    F   CR  SPS+P+ITR  + S
Sbjct: 320 SAKYRNAFKETCR-CSPSNPSITRTGLSS 347


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 162 IATVDSSPGR*LYGRFSSFVLDADVLRSPR 73
           +ATV S     L+  F  ++  A  +R PR
Sbjct: 14  LATVSSQDYSQLFAGFGPYIRQAVAMRDPR 43


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 367 SYIC*SFVLCLVNLLIICSVSCCR 438
           S++    +LC  ++L +C++S  R
Sbjct: 113 SWVSLDILLCTASILSLCAISIDR 136


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 34  RETMAREKTNRRPARRAKNISVQYKRREAAVQSPSRTTIDRS 159
           +E +  E+TNR+   R++       + E   +    T+ +RS
Sbjct: 25  KEKLLEERTNRKRNSRSREREQNSYKNEREYRKYRETSKERS 66


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +1

Query: 34  RETMAREKTNRRPARRAKNISVQYKRREAAVQSPSRTTIDRS 159
           +E +  E+TNR+   R++       + E   +    T+ +RS
Sbjct: 25  KEKLLEERTNRKRNSRSREREQNSYKNEREYRKYRETSKERS 66


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 91  ISVQYKRREAAVQSPSRTTIDRSYRS 168
           I+ Q   R +   SP++    R YRS
Sbjct: 678 ITFQDVARRSVANSPTKNADSREYRS 703


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,346
Number of Sequences: 438
Number of extensions: 2665
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)