Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14k21
(614 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M57230-1|AAA59155.1| 918|Homo sapiens membrane glycoprotein 130... 30 5.6
EF064722-1|ABK41905.1| 918|Homo sapiens interleukin 6 signal tr... 30 5.6
BC117404-1|AAI17405.1| 918|Homo sapiens interleukin 6 signal tr... 30 5.6
BC117402-1|AAI17403.1| 918|Homo sapiens interleukin 6 signal tr... 30 5.6
AB102802-1|BAD89393.1| 857|Homo sapiens IL6ST nirs variant 4 pr... 30 5.6
U74382-1|AAB53363.1| 419|Homo sapiens telomeric repeat DNA-bind... 29 9.9
U70993-1|AAB17975.1| 138|Homo sapiens telomeric repeat binding ... 29 9.9
U40705-1|AAB54036.1| 439|Homo sapiens telomeric repeat binding ... 29 9.9
BC029378-1|AAH29378.1| 419|Homo sapiens telomeric repeat bindin... 29 9.9
AF003001-1|AAB81137.1| 419|Homo sapiens TTAGGG repeat binding f... 29 9.9
>M57230-1|AAA59155.1| 918|Homo sapiens membrane glycoprotein 130
protein.
Length = 918
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 184 GMLSNFQL-YSYLYGNQTDKGVDNIHTEWTLVLILS 288
G + N+ + Y + GN+T VD+ HTE+TL + S
Sbjct: 549 GFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTS 584
>EF064722-1|ABK41905.1| 918|Homo sapiens interleukin 6 signal
transducer (gp130, oncostatin M receptor) protein.
Length = 918
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 184 GMLSNFQL-YSYLYGNQTDKGVDNIHTEWTLVLILS 288
G + N+ + Y + GN+T VD+ HTE+TL + S
Sbjct: 549 GFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTS 584
>BC117404-1|AAI17405.1| 918|Homo sapiens interleukin 6 signal
transducer (gp130, oncostatin M receptor) protein.
Length = 918
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 184 GMLSNFQL-YSYLYGNQTDKGVDNIHTEWTLVLILS 288
G + N+ + Y + GN+T VD+ HTE+TL + S
Sbjct: 549 GFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTS 584
>BC117402-1|AAI17403.1| 918|Homo sapiens interleukin 6 signal
transducer (gp130, oncostatin M receptor) protein.
Length = 918
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 184 GMLSNFQL-YSYLYGNQTDKGVDNIHTEWTLVLILS 288
G + N+ + Y + GN+T VD+ HTE+TL + S
Sbjct: 549 GFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTS 584
>AB102802-1|BAD89393.1| 857|Homo sapiens IL6ST nirs variant 4
protein.
Length = 857
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 184 GMLSNFQL-YSYLYGNQTDKGVDNIHTEWTLVLILS 288
G + N+ + Y + GN+T VD+ HTE+TL + S
Sbjct: 488 GFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTS 523
>U74382-1|AAB53363.1| 419|Homo sapiens telomeric repeat DNA-binding
protein protein.
Length = 419
Score = 29.5 bits (63), Expect = 9.9
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = -2
Query: 226 FRKGRSTAESLITFLNDMKSCQLSKSTAVCVFL 128
FR+ R++AE++I L+ + +CQL ++ +C FL
Sbjct: 98 FRRTRNSAEAIIHGLSSLTACQL-RTIYICQFL 129
>U70993-1|AAB17975.1| 138|Homo sapiens telomeric repeat binding
factor 1 protein.
Length = 138
Score = 29.5 bits (63), Expect = 9.9
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = -2
Query: 226 FRKGRSTAESLITFLNDMKSCQLSKSTAVCVFL 128
FR+ R++AE++I L+ + +CQL ++ +C FL
Sbjct: 98 FRRTRNSAEAIIHGLSSLTACQL-RTIYICQFL 129
>U40705-1|AAB54036.1| 439|Homo sapiens telomeric repeat binding
factor protein.
Length = 439
Score = 29.5 bits (63), Expect = 9.9
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = -2
Query: 226 FRKGRSTAESLITFLNDMKSCQLSKSTAVCVFL 128
FR+ R++AE++I L+ + +CQL ++ +C FL
Sbjct: 98 FRRTRNSAEAIIHGLSSLTACQL-RTIYICQFL 129
>BC029378-1|AAH29378.1| 419|Homo sapiens telomeric repeat binding
factor (NIMA-interacting) 1 protein.
Length = 419
Score = 29.5 bits (63), Expect = 9.9
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = -2
Query: 226 FRKGRSTAESLITFLNDMKSCQLSKSTAVCVFL 128
FR+ R++AE++I L+ + +CQL ++ +C FL
Sbjct: 98 FRRTRNSAEAIIHGLSSLTACQL-RTIYICQFL 129
>AF003001-1|AAB81137.1| 419|Homo sapiens TTAGGG repeat binding
factor 1 protein.
Length = 419
Score = 29.5 bits (63), Expect = 9.9
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = -2
Query: 226 FRKGRSTAESLITFLNDMKSCQLSKSTAVCVFL 128
FR+ R++AE++I L+ + +CQL ++ +C FL
Sbjct: 98 FRRTRNSAEAIIHGLSSLTACQL-RTIYICQFL 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,728,661
Number of Sequences: 237096
Number of extensions: 1911684
Number of successful extensions: 7282
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7282
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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