Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14k21
(614 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 59 5e-09
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 59 5e-09
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 58 9e-09
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 55 9e-08
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 52 5e-07
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 48 8e-06
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 48 1e-05
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 46 5e-05
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 46 5e-05
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 46 5e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 44 2e-04
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 43 3e-04
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 39 0.005
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 39 0.005
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 36 0.043
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 36 0.057
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 33 0.40
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 33 0.40
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 33 0.40
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 33 0.40
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 32 0.54
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 30 2.2
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 30 2.2
BT011177-1|AAR88538.1| 85|Drosophila melanogaster RH16194p pro... 29 3.8
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 29 3.8
AY060486-1|AAL25525.1| 170|Drosophila melanogaster SD10763p pro... 28 8.7
AE014296-3747|AAN12210.1| 170|Drosophila melanogaster CG11100-P... 28 8.7
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 58.8 bits (136), Expect = 5e-09
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Frame = -2
Query: 571 MDPLKLMQFNIQSINNKKWLLETILKDNSIDLCLLNETWLKKSSPSVNITGYNYIG*NAQ 392
M L++ +N ++ L + + +ID+ LL+ET L + + +I GY + G N
Sbjct: 1 MASLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTNKN-NFHIPGYLFYGTNHP 59
Query: 391 N--EHGGVGILIRNTLQFKTIKTAFYQDIQSIAIVVSTVSGPVSILCVYCPP 242
+ HGG GILIRN ++ + +QS +I + +G ++ VYCPP
Sbjct: 60 DGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCPP 111
Score = 33.9 bits (74), Expect = 0.18
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLI-KILHD 68
P QFGFR+ T E + +++++ + +FLDV A+D V L L+ KI+
Sbjct: 541 PTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL 600
Query: 67 LGL-PGKLLK-WIFN 29
L KLLK +++N
Sbjct: 601 LPQNTHKLLKSYLYN 615
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 58.8 bits (136), Expect = 5e-09
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Frame = -2
Query: 571 MDPLKLMQFNIQSINNKKWLLETILKDNSIDLCLLNETWLKKSSPSVNITGYNYIG*NAQ 392
M L++ +N ++ L + + +ID+ LL+ET L + + +I GY + G N
Sbjct: 1 MASLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTNKN-NFHIPGYLFYGTNHP 59
Query: 391 N--EHGGVGILIRNTLQFKTIKTAFYQDIQSIAIVVSTVSGPVSILCVYCPP 242
+ HGG GILIRN ++ + +QS +I + +G ++ VYCPP
Sbjct: 60 DGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCPP 111
Score = 33.9 bits (74), Expect = 0.18
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLI-KILHD 68
P QFGFR+ T E + +++++ + +FLDV A+D V L L+ KI+
Sbjct: 541 PTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL 600
Query: 67 LGL-PGKLLK-WIFN 29
L KLLK +++N
Sbjct: 601 LPQNTHKLLKSYLYN 615
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 58.0 bits (134), Expect = 9e-09
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Frame = -2
Query: 571 MDPLKLMQFNIQSINNKKWLLETILKDNSIDLCLLNETWLKKS-SPSV-NITGYNYIG*N 398
M PL+++ +N ++ K +E ++ + ID+ LL+ET K + +P + Y +
Sbjct: 1 MMPLRILVWNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGAETPKLFGFVAYTANDPS 60
Query: 397 AQNEHGGVGILIRNTLQFKTIKTAFYQDIQSIAIVVSTVSGPVSILCVYCPP 242
N GG ILI+N+L + +Q V+ T GP+S VYCPP
Sbjct: 61 GGNAKGGAAILIKNSLAHFPLTPIATAKVQLAPAVIETALGPISFGAVYCPP 112
Score = 37.5 bits (83), Expect = 0.014
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPL-IKILHD 68
P QFGFR G T E L + + + SK +FLD++ A+D V I L +KI
Sbjct: 545 PEHQFGFRAGHCTVEQLHRVVEQILTAYDSKEYCNSLFLDIREAFDRVWHIGLQLKIKQT 604
Query: 67 LGLP 56
L P
Sbjct: 605 LPAP 608
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 54.8 bits (126), Expect = 9e-08
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Frame = -2
Query: 571 MDPLKLMQFNIQSINNKKWLLETILKDNSIDLCLLNETWLKKSSPSVNITGYN-YIG*NA 395
+D L +M +N +++ NK+ L L++N I + L+NETWL S NI Y Y
Sbjct: 9 IDNLNIMAWNARAVRNKRIELIKFLENNHIHIALINETWLTHSD-RFNIPEYTIYRNDRK 67
Query: 394 QNEHGGVGILIRNTLQFKTIKTAFYQDIQSIAIVVSTVS-GPVSILCVY 251
++ GGV I + NTL + I I+++ I ++T S + I +Y
Sbjct: 68 ESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSIY 116
Score = 43.2 bits (97), Expect = 3e-04
Identities = 26/77 (33%), Positives = 39/77 (50%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P Q+GFR G +T + N +K SK + V LD++ A+D V L+ L +
Sbjct: 570 PTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMI 629
Query: 64 GLPGKLLKWIFNFSSDR 14
G P L+K + NF + R
Sbjct: 630 GTPIYLIKIVQNFLTHR 646
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 52.4 bits (120), Expect = 5e-07
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = -2
Query: 571 MDPLKLMQFNIQSINNKKWLLETILKDNSIDLCLLNETWLKKSSPSVNITGYNYIG*NAQ 392
M L++ +N ++ +K L L + ID+ LL+ET L S + I Y++ G N
Sbjct: 1 MATLRIATWNANGVSQRKLELAQFLHEKHIDVMLLSETHLT-SKYNFQIRDYHFYGTNHP 59
Query: 391 N--EHGGVGILIRNTLQFKTIKTAFYQDIQSIAIVVSTVSGP-VSILCVYCPP 242
+ HGG ILIRN ++ K +Q+ +I + +++ VYCPP
Sbjct: 60 DGKAHGGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPP 112
Score = 35.9 bits (79), Expect = 0.043
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLI-KILHD 68
P QFGFR+ T E + ++++ + VFLDV A+D V L L+ KI
Sbjct: 543 PAHQFGFRESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDKVWLDGLMFKI--K 600
Query: 67 LGLPGKLLKWIFNFSSDRTLYV 2
+ LP K + ++ DR V
Sbjct: 601 ISLPESTHKLLKSYLYDRKFAV 622
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 48.4 bits (110), Expect = 8e-06
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Frame = -2
Query: 568 DPLKLMQFNIQSINNKKWLLETILKDNSIDLCLLNETWLKKSSPSVNITGY-NYIG*N-A 395
D LK+ +N INNK L+ + + + ++ ET L +S + + GY Y+ N A
Sbjct: 20 DILKIAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPA 79
Query: 394 QNEHGGVGILIRNTLQFKTIKTAFYQDIQSIAIVV----STVSGPVSILCVYCPP 242
++ GGV ++ ++L+ ++ + IQS IV+ + S + I VYCPP
Sbjct: 80 SSKRGGVATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPP 134
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P QFGFRK T + + + K VFLD+ A+D V L+ L +
Sbjct: 602 PLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI 661
Query: 64 GLPGKLLKWIFNFSSDRTLYV 2
LP L + ++ ++RT V
Sbjct: 662 -LPYNLYIILESYLTNRTFEV 681
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Frame = -2
Query: 568 DPLKLMQFNIQSINNKKWLLETILKDNSIDLCLLNETWLKKSSPSVNITGY-NYIG*N-A 395
D LK+ +N INNK L+ + + + ++ ET L +S + + GY Y+ N
Sbjct: 8 DILKIAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPV 67
Query: 394 QNEHGGVGILIRNTLQFKTIKTAFYQDIQSIAIVV----STVSGPVSILCVYCPP 242
++ GGV ++ ++++ +K + IQS IV+ + S + I VYCPP
Sbjct: 68 SSKRGGVATIVNSSIRHMALKPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPP 122
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P QFGFRK + + + + K VFLD+ A+D V L+ L +
Sbjct: 590 PLHQFGFRKEHGSEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI 649
Query: 64 GLPGKLLKWIFNFSSDRTLYV 2
LP L + ++ ++RT V
Sbjct: 650 -LPYNLYIILESYLTNRTFEV 669
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 45.6 bits (103), Expect = 5e-05
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Frame = -2
Query: 568 DPLKLMQFNIQSINNKKWLLETILKDNSIDLCLLNETWLKKSSPSVNITGY-NYIG*N-A 395
D LK+ +N INNK L+ + + + ++ ET L S + + GY Y+ N
Sbjct: 8 DILKIAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPV 67
Query: 394 QNEHGGVGILIRNTLQFKTIKTAFYQDIQSIAIVV----STVSGPVSILCVYCPP 242
++ GGV ++ ++++ ++ + IQS IV+ + S + I VYCPP
Sbjct: 68 SSKRGGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPP 122
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P QFGFRK T + + + K VFLD+ A+D V L+ L +
Sbjct: 590 PLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI 649
Query: 64 GLPGKLLKWIFNFSSDRTLYV 2
LP L + ++ ++RT V
Sbjct: 650 -LPYNLYIILESYLTNRTFEV 669
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 45.6 bits (103), Expect = 5e-05
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Frame = -2
Query: 568 DPLKLMQFNIQSINNKKWLLETILKDNSIDLCLLNETWLKKSSPSVNITGY-NYIG*N-A 395
D LK+ +N INNK L+ + + + ++ ET L S + + GY Y+ N
Sbjct: 8 DILKIAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPV 67
Query: 394 QNEHGGVGILIRNTLQFKTIKTAFYQDIQSIAIVV----STVSGPVSILCVYCPP 242
++ GGV ++ ++++ ++ + IQS IV+ + S + I VYCPP
Sbjct: 68 SSKRGGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPP 122
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P QFGFRK T + + + K VFLD+ A+D V L+ L +
Sbjct: 590 PLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI 649
Query: 64 GLPGKLLKWIFNFSSDRTLYV 2
LP L + ++ ++RT V
Sbjct: 650 -LPYNLYIILESYLTNRTFEV 669
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 45.6 bits (103), Expect = 5e-05
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Frame = -2
Query: 568 DPLKLMQFNIQSINNKKWLLETILKDNSIDLCLLNETWLKKSSPSVNITGY-NYIG*N-A 395
D LK+ +N INNK L+ + + + ++ ET L S + + GY Y+ N
Sbjct: 8 DILKIAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPV 67
Query: 394 QNEHGGVGILIRNTLQFKTIKTAFYQDIQSIAIVV----STVSGPVSILCVYCPP 242
++ GGV ++ ++++ ++ + IQS IV+ + S + I VYCPP
Sbjct: 68 SSKRGGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPP 122
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P QFGFRK T + + + K VFLD+ A+D V L+ L +
Sbjct: 590 PLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI 649
Query: 64 GLPGKLLKWIFNFSSDRTLYV 2
LP L + ++ ++RT V
Sbjct: 650 -LPYNLYIILESYLTNRTFEV 669
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = -2
Query: 235 QFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDLGLP 56
QFGF+KG+ST++ L+ +++ + SK V LD A+D V + +I+ L +
Sbjct: 543 QFGFKKGKSTSDCLL-YVDYL--ITKSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTG 599
Query: 55 GKLLKWIFNFSSDRTLYV 2
K++K+I NF S+R + V
Sbjct: 600 PKIIKYIKNFMSNRKITV 617
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 43.2 bits (97), Expect = 3e-04
Identities = 26/77 (33%), Positives = 39/77 (50%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P Q+GFR G +T + N +K SK + V LD++ A+D V L+ L +
Sbjct: 518 PTVQYGFRNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMI 577
Query: 64 GLPGKLLKWIFNFSSDR 14
G P L+K + NF + R
Sbjct: 578 GTPIYLIKIVQNFLTHR 594
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 39.1 bits (87), Expect = 0.005
Identities = 28/81 (34%), Positives = 38/81 (46%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P QFGFR T E L +N +K AV FLD+Q A+D V L+ L
Sbjct: 547 PKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRL 606
Query: 64 GLPGKLLKWIFNFSSDRTLYV 2
P +L + +F +RT +V
Sbjct: 607 -FPPQLYLVVKSFLEERTFHV 626
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 39.1 bits (87), Expect = 0.005
Identities = 28/81 (34%), Positives = 38/81 (46%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P QFGFR T E L +N +K AV FLD+Q A+D V L+ L
Sbjct: 349 PKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRL 408
Query: 64 GLPGKLLKWIFNFSSDRTLYV 2
P +L + +F +RT +V
Sbjct: 409 -FPPQLYLVVKSFLEERTFHV 428
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 35.9 bits (79), Expect = 0.043
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Frame = -2
Query: 235 QFGFRKGRSTAESLITFLNDMKSCQ-----LSKSTAVC--VFLDVQGAYDNVDLIPLIKI 77
Q+GFRKG+ST ++L + + + L S C + LDV+ A++ ++
Sbjct: 514 QYGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILGA 573
Query: 76 LHDLGLPGKLLKWIFNFSSDRTLY 5
+ +LG+P + I N+ DR L+
Sbjct: 574 MRNLGVPDYIRGVIGNYFRDRVLW 597
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 35.5 bits (78), Expect = 0.057
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNV 101
P QFGFR+G ST E + + K VF+D+Q A+D V
Sbjct: 546 PDHQFGFRQGHSTVEQVHRLTKHILQAFDDKEYCNAVFIDMQQAFDRV 593
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/81 (30%), Positives = 33/81 (40%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P QFGFRK L + K FLD+ A+D V L+ L L
Sbjct: 146 PSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL 205
Query: 64 GLPGKLLKWIFNFSSDRTLYV 2
+P L + N+ S+RT V
Sbjct: 206 -IPRYLFDLLENYLSNRTFSV 225
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/81 (30%), Positives = 33/81 (40%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P QFGFRK L + K FLD+ A+D V L+ L L
Sbjct: 593 PSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL 652
Query: 64 GLPGKLLKWIFNFSSDRTLYV 2
+P L + N+ S+RT V
Sbjct: 653 -IPRYLFDLLENYLSNRTFSV 672
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/81 (30%), Positives = 33/81 (40%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P QFGFRK L + K FLD+ A+D V L+ L L
Sbjct: 593 PSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL 652
Query: 64 GLPGKLLKWIFNFSSDRTLYV 2
+P L + N+ S+RT V
Sbjct: 653 -IPRYLFDLLENYLSNRTFSV 672
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 32.7 bits (71), Expect = 0.40
Identities = 25/81 (30%), Positives = 33/81 (40%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P QFGFRK L + K FLD+ A+D V L+ L L
Sbjct: 593 PSHQFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL 652
Query: 64 GLPGKLLKWIFNFSSDRTLYV 2
+P L + N+ S+RT V
Sbjct: 653 -IPRYLFDLLENYLSNRTFSV 672
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 32.3 bits (70), Expect = 0.54
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -2
Query: 235 QFGFRKGRSTAESLITFLNDMKSCQLSKSTAVC-VFLDVQGAYDNVDLIPLIKILHDLG 62
QFGFR+GR ++ + + S S + V F+D +GA+DNV+ + L DLG
Sbjct: 544 QFGFRQGRCVEDA---WRHVKSSVGASAAQYVLGTFVDFKGAFDNVEWSAALSRLADLG 599
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P QFGFRK T + + + K VFLD+ A+D V L+ L +
Sbjct: 474 PLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI 533
Query: 64 GLPGKLLKWIFNFSSDRTLYV 2
LP L + ++ ++RT V
Sbjct: 534 -LPYNLYIILESYLTNRTFEV 553
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = -2
Query: 244 PPCQFGFRKGRSTAESLITFLNDMKSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKILHDL 65
P QFGFRK T + + + K VFLD+ A+D V L+ L +
Sbjct: 552 PLHQFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI 611
Query: 64 GLPGKLLKWIFNFSSDRTLYV 2
LP L + ++ ++RT V
Sbjct: 612 -LPYNLYIILESYLTNRTFEV 631
>BT011177-1|AAR88538.1| 85|Drosophila melanogaster RH16194p
protein.
Length = 85
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -2
Query: 382 GGVGILIRNTLQFKTIKTAFYQDIQSIAIVVSTVSGPVSILCVYCPPPCQF-GFRKGRST 206
GGV I +R+TL + + ++ + + + +S V I C Y PP +F ++ S
Sbjct: 15 GGVLIAVRSTLASEELLFDESRNSEFLCVKLSFSDRSVYITCSYIPPSSEFPEYQNHLSA 74
Query: 205 AESLITFLNDM 173
+S++ L+ +
Sbjct: 75 IQSILNKLSKL 85
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = -2
Query: 562 LKLMQFNIQSINNKKWLLETILKDNSIDLCLLNETWLKKSSPSV----NITGYNYIG*NA 395
+ ++Q+NI I N L ++KD++ D+ L ET L +S + +GY +
Sbjct: 3 ITILQWNIHGIFNNYNELTLLIKDHAPDIVFLQETKLPCNSTNFICPKEYSGYFHNFSYN 62
Query: 394 QNEHGGVGILIRNTL 350
+ G+G+LI+ +
Sbjct: 63 TSAKQGIGVLIKRNV 77
>AY060486-1|AAL25525.1| 170|Drosophila melanogaster SD10763p
protein.
Length = 170
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 380 RCRYIDKKYSSIQNYQNSILSGYSKYRYCSVDSI-RTSVHSVCILSTPLSV 231
+C Y D + +Q Y ++ + Y+ Y CS SI RTS I S P+ +
Sbjct: 51 KCAYTDLFPTFMQTYVHTYVYMYNFYAKCSRKSIRRTSSRIYFISSLPIQI 101
>AE014296-3747|AAN12210.1| 170|Drosophila melanogaster CG11100-PA,
isoform A protein.
Length = 170
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 380 RCRYIDKKYSSIQNYQNSILSGYSKYRYCSVDSI-RTSVHSVCILSTPLSV 231
+C Y D + +Q Y ++ + Y+ Y CS SI RTS I S P+ +
Sbjct: 51 KCAYTDLFPTFMQTYVHTYVYMYNFYAKCSRKSIRRTSSRIYFISSLPIQI 101
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,002,520
Number of Sequences: 53049
Number of extensions: 560127
Number of successful extensions: 1271
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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