Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14k21
         (614 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    32   0.28 
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z81041-2|CAB02787.4| 1403|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AL132951-1|CAC44310.2|  707|Caenorhabditis elegans Hypothetical ...    29   3.5  
AL032631-9|CAA21575.2|  893|Caenorhabditis elegans Hypothetical ...    29   3.5  
U41543-7|AAB37026.1|  284|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 32.3 bits (70), Expect = 0.28
 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
 Frame = -2

Query: 244 PPCQFGFRKGRSTAESLITFLNDM---KSCQLSKSTAVCVFLDVQGAYDNVDLIPLIKIL 74
           P  Q GF+   ST  ++I   ND+    + +     A+   LD++ A+D V   P  K+ 
Sbjct: 433 PAHQHGFKPEHSTTTAVIQVTNDIIGGLNMKNPPERAIMACLDLRAAFDKV---PTKKLC 489

Query: 73  HDL----GLPGKLLKWIFNFSSDRTL 8
           +DL    G+  K+  W+ N+   R +
Sbjct: 490 NDLMEAQGIEPKIKLWLGNYLHKRLI 515


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 115 AYDNVDLIPLIKILHDLGLPGKLLKWIFNFSSDRTLYV 2
           A+D V+   L++ LHD G+      W  +F S RT  V
Sbjct: 3   AFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSV 40


>Z81041-2|CAB02787.4| 1403|Caenorhabditis elegans Hypothetical
           protein C27A7.4 protein.
          Length = 1403

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
 Frame = -2

Query: 589 NLTLYLMDPLKLMQFNIQSINNKKWLLETILKDNSIDLCLLNETWLKKSSPSVNITGYNY 410
           N  LY ++  K+    +Q    ++  L  I  D  I    +N  W+  ++ +  I  YN 
Sbjct: 438 NQNLYCIEKDKIFARTLQGTLRQEISLPEIEGDPEI--LEVNRCWMAVATTNGFIRIYNL 495

Query: 409 IG*NAQNEHGGVGIL--IRNTLQFKTIKTAFYQDIQSIAIV--VSTVSGPVSILCVYCPP 242
              +AQ EH    I+  ++N  +F TI+     +  +++ +  VSTV+  + +       
Sbjct: 496 SAKDAQQEHNSKYIIENVKNFYKFHTIRINHTGNKVAVSYLEDVSTVAERLLVYDAELDA 555

Query: 241 PCQFGFRKGRSTAESLIT 188
              F F +G +  +   T
Sbjct: 556 VSYFSFDRGMTDTQEYET 573


>Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical protein
            K12D12.2 protein.
          Length = 1696

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -2

Query: 601  ILKQNLTLYLMDPLKLMQFNIQSINNKKWLLETILKDNSIDLCLLNETWL 452
            + K  + L+L    K +   +Q     +++L T+ + NSID     E WL
Sbjct: 1353 LFKSMIDLFLQPGEKCVDAKVQLYKTMRFILRTLFEKNSIDTVNEAEEWL 1402


>AL132951-1|CAC44310.2|  707|Caenorhabditis elegans Hypothetical
           protein Y67H2A.1 protein.
          Length = 707

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -2

Query: 598 LKQNLTLYLMDPLKLMQFNIQSINNKKWLLETI-LKDNS 485
           L+Q ++++    LKL+ FN+Q +N+   L++ I LK+ S
Sbjct: 511 LEQRMSVHYSGSLKLLIFNLQQLNDDACLIQNIKLKEIS 549


>AL032631-9|CAA21575.2|  893|Caenorhabditis elegans Hypothetical
           protein Y106G6H.7 protein.
          Length = 893

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 400 NAQNEHGGVGILIRNTLQFKTIKTAFYQDIQS-IAIVVS 287
           +A  +H   G+L+   L  K + T+F++  QS I +VVS
Sbjct: 335 SASQQHAEFGVLVEKQLGRKDVVTSFWRSAQSAIEVVVS 373


>U41543-7|AAB37026.1|  284|Caenorhabditis elegans Hypothetical
           protein F46H5.5 protein.
          Length = 284

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -2

Query: 469 LNETWLKKSSPSVNITGYNYIG*NAQNEHGGVGILIRNTL 350
           LN+T L K +   N+TG++Y G N  +    +G L  N +
Sbjct: 231 LNDTELMKQNTGFNLTGFDYQG-NTASRKERIGNLNENDI 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,412,044
Number of Sequences: 27780
Number of extensions: 312228
Number of successful extensions: 892
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)