Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14k19
(643 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 34 0.015
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 33 0.035
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 32 0.081
SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+, L-... 30 0.25
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 28 1.00
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 27 1.7
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 27 1.7
SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|c... 27 3.0
SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory... 27 3.0
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 26 4.0
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 26 4.0
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 26 4.0
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 26 4.0
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 4.0
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 26 4.0
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 26 5.3
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 25 7.0
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 25 7.0
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 25 7.0
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 25 7.0
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 25 9.3
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 25 9.3
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 25 9.3
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 34.3 bits (75), Expect = 0.015
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 536 STEQPPKKESEKKYXCTV--CSKSFTRIYGLRYHMTXH 643
S++ + +S+ Y CT C+K FTR Y L+ HM H
Sbjct: 557 SSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTH 594
Score = 26.6 bits (56), Expect = 3.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 569 KKYXCTVCSKSFTRIYGLRYHMTXH 643
+ + C++C KSF R + R H H
Sbjct: 598 RPFQCSICKKSFARQHDKRRHEQLH 622
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 33.1 bits (72), Expect = 0.035
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 569 KKYXCTVCSKSFTRIYGLRYHMT 637
K Y C VCSK + + GL+YH T
Sbjct: 397 KPYRCEVCSKRYKNLNGLKYHRT 419
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 31.9 bits (69), Expect = 0.081
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 533 KSTEQPPKKESEKKYXCTVCSKSFTRIYGLRYHMTXH 643
K PP+K K+Y C C+++F R+ L+ H+ H
Sbjct: 58 KDPNAPPQKV--KQYVCETCTRAFARLEHLKRHIRSH 92
>SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+,
L-lysine forming] |Schizosaccharomyces pombe|chr
1|||Manual
Length = 368
Score = 30.3 bits (65), Expect = 0.25
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +2
Query: 320 LNCLKANATLSQMLMMQSLTNLHRTEIENIDINVVYQDHEYDIPLFNNHASLDFEPFSSK 499
+NC+ + + + ++SL +R D++ + IP++N + + D K
Sbjct: 247 VNCIYLSMPIPKFCTVESLNVPNRKLRVVCDVSCDTTNPNNPIPIYNVNTTFDHPTVEVK 306
Query: 500 ELTPLPPVTVIKSTEQP---PKKESE 568
+T PP+ VI P P++ SE
Sbjct: 307 GVTTPPPLEVISIDHLPTLLPRESSE 332
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 28.3 bits (60), Expect = 1.00
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +2
Query: 434 HEYDIPLFNNHASLDF-EPFSSKELTPLPPVTVIKSTEQPPKKESEK--KYXC 583
HE ++P H + D+ +P +S TP+P + +E+PPKK+ K K+ C
Sbjct: 472 HESEMP---PHVTRDYTQPAASA--TPVPKEKPSEKSEKPPKKKGSKLEKFCC 519
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 27.5 bits (58), Expect = 1.7
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 8/43 (18%)
Frame = +2
Query: 539 TEQPPKKES------EKKYXCTV--CSKSFTRIYGLRYHMTXH 643
TE+P KK S + ++ CT C KSFTR LR H H
Sbjct: 8 TEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTH 50
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 545 QPPKKESEKKYXCTVCSKSFTRIYGLRYHMTXH 643
+P +S++ + C C+K FTR L H H
Sbjct: 21 EPSLIDSKRVFPCDQCAKRFTRHENLTRHKACH 53
>SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 679
Score = 26.6 bits (56), Expect = 3.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 497 KELTPLPPVTVIKSTEQPPKKESEKKYXCTVCSKSFTRIYGLRYHM 634
KEL P V IK + P KE K ++ +K FT I L +++
Sbjct: 32 KELGPPDQVNTIKVNAKNPSKEWGKDQDKSLFTKLFTPIETLTFYV 77
>SPBC1289.01c |chr4|cfh3, SPBC1539.11c|chitin synthase regulatory
factor |Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 428 QDHEYDIPLFNNHASLDFEP-FSSKELTPLPPVTVIKSTEQPPKKESEKKY 577
QD +IP+ + S P SS +T PPV+ K T+ K++ KK+
Sbjct: 573 QDVIKEIPVTASETSPPHAPAVSSTPVTSAPPVSQTKVTKVSVPKKTSKKF 623
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 26.2 bits (55), Expect = 4.0
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 401 ENIDINVVYQD--HEYDIPLFNNHASLDFEPFSSKELTPLPPVTVIKSTEQP 550
EN ++ D HEY+ PL ++ SLD P E P+P + + S P
Sbjct: 272 ENCRTDIYRSDSIHEYEEPLTSSITSLD-SPHVLDENAPIPLLPKVVSLPDP 322
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 26.2 bits (55), Expect = 4.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 446 IPLFNNHASLDFEPFSSKELTPLPPVTVI 532
+P F SL EPFSS +T LP V +
Sbjct: 649 LPTFQESCSLPIEPFSS-NITDLPFVNTV 676
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 563 SEKKYXCTVCSKSFTRIYGLRYHMTXH 643
SEK + C +C K F+R LR H H
Sbjct: 448 SEKPFVC-ICGKRFSRRDNLRQHERLH 473
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +2
Query: 560 ESEKKYXCTV--CSKSFTRIYGLRYHMT 637
E K Y C + C KSFTR L+ H++
Sbjct: 231 EERKTYHCPMEGCKKSFTRSSALKKHIS 258
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 26.2 bits (55), Expect = 4.0
Identities = 24/102 (23%), Positives = 44/102 (43%)
Frame = +2
Query: 311 NFKLNCLKANATLSQMLMMQSLTNLHRTEIENIDINVVYQDHEYDIPLFNNHASLDFEPF 490
N K+ +K+N T++ + + L TE + D + + Y++ + A+LD E F
Sbjct: 1272 NLKIPNMKSNPTIASLCELLVLP----TETLSADNEITF----YEVSDIQHEANLDIESF 1323
Query: 491 SSKELTPLPPVTVIKSTEQPPKKESEKKYXCTVCSKSFTRIY 616
TP+ ++ S+E+ + KY S IY
Sbjct: 1324 QYFPCTPMQQ-ALLASSEKNGVEYYYNKYLFETGKSSQEEIY 1364
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 4.0
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 533 KSTEQPPKKESEKKYXCTVCSKSFTRIYGLRYHMTXH 643
+ST+ P ++ + Y C +C+K+F R+ H+ H
Sbjct: 15 RSTKNP---DAPRPYKCPLCTKAFYRLEHQTRHIRTH 48
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 5.3
Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 509 PLPPVTVIK-STEQPPKKESEKKYXCTVCSKSF 604
P P + K ++PPK+ +++ CT+C + F
Sbjct: 371 PAPEDVIAKMKVQKPPKELIDEEGECTICMEMF 403
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 25.4 bits (53), Expect = 7.0
Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 2/112 (1%)
Frame = +2
Query: 110 SKNICRTCLTESDSTMFMNVQDLVEHEMSKVKLIDVLVFLNCLENND--EENWPQGICSS 283
S N + + ++ +QD++E + + + F ENND +E P SS
Sbjct: 350 SSNELLASVRDENTKKLKELQDIIEEQSKHMARLHREGFSEAAENNDKPKETMPCTYDSS 409
Query: 284 CVSTALHSYNFKLNCLKANATLSQMLMMQSLTNLHRTEIENIDINVVYQDHE 439
HS L+ KAN +Q + S + + ++ N+ ++E
Sbjct: 410 LADD--HSDTSNLSKDKANTLCAQCSVYLSEKYQQQQSLLQLESNIQQLENE 459
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 395 EIENIDINVVYQDHEYDIPLFNNHASLD 478
E+EN+ N Y+DH ++P+ N+ LD
Sbjct: 658 ELENVIYNSKYEDHGKNLPI--NYFGLD 683
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 25.4 bits (53), Expect = 7.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 431 DHEYDIPLFNNHASLDFEPFSSKELTPLPPVTVIKSTE 544
+ +Y I L+N S D PF LT LPP I + E
Sbjct: 172 ERKYKISLYNIK-SFDARPFQDIPLTFLPPHVRIANVE 208
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 25.4 bits (53), Expect = 7.0
Identities = 8/30 (26%), Positives = 20/30 (66%)
Frame = -2
Query: 165 FINIVESDSVKQVRHMFFDKGIIRLVNSII 76
F N+++ + + + H FD+ ++ L+NS++
Sbjct: 673 FYNLLKKSAQQSLFHFVFDRPLLLLLNSLL 702
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 25.0 bits (52), Expect = 9.3
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +2
Query: 302 HSYN-FKLNCLKANATLSQ----MLMMQSLTNLHRTEIENIDINVVYQDH 436
+ YN KL C + L ++ +S T+L +TEI +++++V ++H
Sbjct: 818 NDYNGVKLECEQLEGELQNHQQSLVQGESTTSLIKTEIAELELSLVNEEH 867
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 25.0 bits (52), Expect = 9.3
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 533 KSTEQPPKKESEKKYXCTV--CSKSFTRIYGLRYHMTXH 643
K+ + +E + +Y C C+KSFTR R H H
Sbjct: 3 KAKKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSH 41
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 572 KYXCTVCSKSFTRIYGLRYHMTXH 643
+Y CT C + F+R L+ H H
Sbjct: 467 RYRCTECLQGFSRPSSLKIHTYSH 490
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,268,164
Number of Sequences: 5004
Number of extensions: 42149
Number of successful extensions: 171
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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