Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14k19
         (643 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    30   0.017
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    29   0.038
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    23   2.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.3  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 30.3 bits (65), Expect = 0.017
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 566 EKKYXCTVCSKSFTRIYGLRYHMTXH 643
           EK + C  C K FTR + L+ HM  H
Sbjct: 7   EKPFECPECHKRFTRDHHLKTHMRLH 32


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 29.1 bits (62), Expect = 0.038
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 566 EKKYXCTVCSKSFTRIYGLRYHMTXH 643
           E+ + CTVCSK+F +   L  HM  H
Sbjct: 173 ERPHKCTVCSKTFIQSGQLVIHMRTH 198



 Score = 29.1 bits (62), Expect = 0.038
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 566 EKKYXCTVCSKSFTRIYGLRYHMTXH 643
           EK Y C +C KSF   + L+ H   H
Sbjct: 229 EKPYTCDICGKSFGYNHVLKLHQVAH 254



 Score = 27.5 bits (58), Expect = 0.12
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +2

Query: 566 EKKYXCTVCSKSFTRIYGLRYHMTXH 643
           EK Y C  CSKSF+    L  H   H
Sbjct: 117 EKPYQCEYCSKSFSVKENLSVHRRIH 142



 Score = 27.1 bits (57), Expect = 0.15
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +2

Query: 497 KELTPLPPVTVIKS----TEQPPKKESEKKYXCTVCSKSFTRIYGLRYHMTXH 643
           K L   P ++V  S    +E P     EK Y C +C K+F +    + H+  H
Sbjct: 32  KSLVCSPDLSVFTSPACGSETPLTNIEEKTYQCLLCQKAFDQKNLYQSHLRSH 84



 Score = 27.1 bits (57), Expect = 0.15
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +2

Query: 566 EKKYXCTVCSKSFTRIYGLRYHMTXH 643
           EK Y C  C K FT    L+ H   H
Sbjct: 201 EKPYVCKACGKGFTCSKQLKVHTRTH 226



 Score = 26.6 bits (56), Expect = 0.20
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 557 KESEKKYXCTVCSKSFTRIYGLRYHMTXH 643
           KE E  Y C +C K+F     L  H   H
Sbjct: 86  KEGEDPYRCNICGKTFAVPARLTRHYRTH 114



 Score = 26.2 bits (55), Expect = 0.27
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 566 EKKYXCTVCSKSFTRIYGLRYHMTXH 643
           E+ Y C VC ++F     L  HM  H
Sbjct: 145 ERPYKCDVCERAFEHSGKLHRHMRIH 170



 Score = 24.6 bits (51), Expect = 0.82
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 566 EKKYXCTVCSKSFTRIYGLRYHMTXH 643
           EK Y CT+C ++F     +  H+  H
Sbjct: 257 EKVYKCTLCHETFGSKKTMELHIKTH 282


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 581 CTVCSKSFTRIYGLRYHMTXH 643
           C +C K+F+R + L+ H+  H
Sbjct: 45  CHLCGKAFSRPWLLQGHIRTH 65


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 146 DSTMFMNVQDLVEHEMSKVKLIDV 217
           D  +  N +  + +EMSKVK+ID+
Sbjct: 256 DGKLKPNKKVRISNEMSKVKVIDM 279


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,287
Number of Sequences: 438
Number of extensions: 2930
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)