Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14k07
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21322-4|AAA62540.2| 508|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical p... 31 0.73
Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical pr... 31 0.73
AF034078-1|AAC02976.1| 815|Caenorhabditis elegans putative E1-E... 31 0.73
Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical p... 29 2.2
Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical p... 29 2.2
DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian str... 29 3.9
AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical ... 29 3.9
Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protei... 27 9.1
>U21322-4|AAA62540.2| 508|Caenorhabditis elegans Hypothetical
protein K10D2.2 protein.
Length = 508
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 215 ITAEKCVIRKRIYNNDIEVYDVMSKSDILLENTNVIEQ*CVWN 343
+ A+ ++R R + D+E D+ K+D+ L NT +++Q C W+
Sbjct: 226 VNAKVPIVRFRSSDMDMEA-DISYKNDLALHNTQLLQQYCKWD 267
>Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical
protein Y49E10.11b protein.
Length = 1089
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 179 VSYHERPAVGMIITAEKCVIRKRIY-NNDIEVYDVMSKSDILLENTNVIEQ 328
+ Y+ + + +T E + IY NNDIE+YDV S S + +N+ E+
Sbjct: 328 ILYNNLIPISLQVTLEVVRFFQAIYINNDIEMYDVNSDSCAIARTSNLNEE 378
>Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical
protein Y49E10.11a protein.
Length = 1139
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 179 VSYHERPAVGMIITAEKCVIRKRIY-NNDIEVYDVMSKSDILLENTNVIEQ 328
+ Y+ + + +T E + IY NNDIE+YDV S S + +N+ E+
Sbjct: 328 ILYNNLIPISLQVTLEVVRFFQAIYINNDIEMYDVNSDSCAIARTSNLNEE 378
>AF034078-1|AAC02976.1| 815|Caenorhabditis elegans putative E1-E2
ATPase protein.
Length = 815
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 179 VSYHERPAVGMIITAEKCVIRKRIY-NNDIEVYDVMSKSDILLENTNVIEQ 328
+ Y+ + + +T E + IY NNDIE+YDV S S + +N+ E+
Sbjct: 4 ILYNNLIPISLQVTLEVVRFFQAIYINNDIEMYDVNSDSCAIARTSNLNEE 54
>Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 265 YIVIIYSFPYNTFFRGYNHTYGRSLMITDGHTFNFMLLFPTEKNN 131
Y+++ SFPYN + Y T S + + N+ +FP + N
Sbjct: 281 YLMLPDSFPYNATLKIYGETLQDSSLFAAVNKSNYQTMFPMKVTN 325
>Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -2
Query: 265 YIVIIYSFPYNTFFRGYNHTYGRSLMITDGHTFNFMLLFPTEKNN 131
Y+++ SFPYN + Y T S + + N+ +FP + N
Sbjct: 281 YLMLPDSFPYNATLKIYGETLQDSSLFAAVNKSNYQTMFPMKVTN 325
>DQ812088-1|ABG89384.1| 530|Caenorhabditis elegans mammalian
stromal interaction molecule-1 protein.
Length = 530
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 312 RMLLNSDVCGMPLLL*SK--YINVKNDYSSFYNKKSEGS 422
R L +CG PLL ++ +IN S FYNK EGS
Sbjct: 374 RWLQIESLCGFPLLYLNETEHINRSIASSHFYNKSHEGS 412
>AC024823-2|AAF59596.3| 530|Caenorhabditis elegans Hypothetical
protein Y55B1BM.1a protein.
Length = 530
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 312 RMLLNSDVCGMPLLL*SK--YINVKNDYSSFYNKKSEGS 422
R L +CG PLL ++ +IN S FYNK EGS
Sbjct: 374 RWLQIESLCGFPLLYLNETEHINRSIASSHFYNKSHEGS 412
>Z22178-3|CAA80159.3| 1027|Caenorhabditis elegans Hypothetical
protein F54C8.3 protein.
Length = 1027
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +2
Query: 152 QEHKIESMTVSYHERPAVGMIITAEKCVIRKRIYNNDIEVYDVMSKSDILLENTNVI 322
Q+ KI S+T SY++R + + + + N+ ++ SD+L E+ N +
Sbjct: 748 QDAKISSVTPSYYKRHPFNQLSGMGRSIQVSVLQKNEFSSIVIVPTSDVLPEDENEV 804
>AF192400-1|AAF24233.1| 1027|Caenorhabditis elegans emb-30 protein
protein.
Length = 1027
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +2
Query: 152 QEHKIESMTVSYHERPAVGMIITAEKCVIRKRIYNNDIEVYDVMSKSDILLENTNVI 322
Q+ KI S+T SY++R + + + + N+ ++ SD+L E+ N +
Sbjct: 748 QDAKISSVTPSYYKRHPFNQLSGMGRSIQVSVLQKNEFSSIVIVPTSDVLPEDENEV 804
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,579,763
Number of Sequences: 27780
Number of extensions: 289682
Number of successful extensions: 638
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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