Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14k04
         (660 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-2|CAB60843.3|  534|Caenorhabditis elegans Hypothetical ...    81   5e-16
U23514-6|AAC46544.2|  816|Caenorhabditis elegans Hypothetical pr...    37   0.015
Z81586-9|CAB04699.2|  676|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AL021479-3|CAA16324.1|  279|Caenorhabditis elegans Hypothetical ...    29   2.9  
L19120-1|AAA28155.1|  815|Caenorhabditis elegans kinesin heavy c...    28   5.1  
L07144-3|AAK21446.1|  815|Caenorhabditis elegans Uncoordinated p...    28   5.1  
AB017163-1|BAA32594.1|  815|Caenorhabditis elegans kinesin Heavy...    28   5.1  
AF078788-3|AAC26966.1|  547|Caenorhabditis elegans Hypothetical ...    28   6.8  
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z70035-11|CAA93872.1|  388|Caenorhabditis elegans Hypothetical p...    27   8.9  
AC084159-15|AAK39353.1|  418|Caenorhabditis elegans Hypothetical...    27   8.9  

>AL132876-2|CAB60843.3|  534|Caenorhabditis elegans Hypothetical
           protein Y105E8A.2 protein.
          Length = 534

 Score = 81.4 bits (192), Expect = 5e-16
 Identities = 37/112 (33%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
 Frame = +2

Query: 266 NKSQNQELVKVTTTNKESYECQLPELRSTESTSIDDYDGPSPLHLLKPLMNKE-MCSYRL 442
           N   + + V++ + N E + C+LP++      +++ Y G +   LL+ ++ K+ MCSY +
Sbjct: 55  NTELSDDYVRIMSKNNERFLCKLPQIDVEVKKNVE-YSGATAGKLLETMLYKDKMCSYLI 113

Query: 443 ESYWSYEVCHGRYIRQYHEERE-GKQINTQEYFLGYWSSEKQAKLEAEMKAA 595
           + YW+Y+VCHGRY+ QYHE++    Q++  E++LG + S   A    ++K A
Sbjct: 114 DVYWTYQVCHGRYVIQYHEDKMLTGQVSRTEFYLGNFDSALTASTNEQVKPA 165



 Score = 38.7 bits (86), Expect = 0.004
 Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
 Frame = +2

Query: 395 HLLKPLMNKEMCSYRLESYWSYEVCHGRYIRQYHEEREGKQINTQEYFLGYWSS---EKQ 565
           H +  ++  E C      +W YE C+G+++ Q+HE+  G++    +  LG +     ++ 
Sbjct: 341 HTVNRILTGEDCIVGGTGWWKYEFCYGKHVIQFHEDANGQR---SDILLGVFDEVVHKEW 397

Query: 566 AKLEAEMKAA-QESKQIPKTTKV 631
            KL+   + A Q + QI + +++
Sbjct: 398 VKLDRHARGAIQGNNQIDQISQI 420


>U23514-6|AAC46544.2|  816|Caenorhabditis elegans Hypothetical
           protein F48E8.4 protein.
          Length = 816

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
 Frame = +2

Query: 233 NLNENFVDGEKNKSQNQELVKVTTTNKESYECQLPELRSTESTSIDDYDGPSPL-HLLKP 409
           +L +  V+   + S  Q L+ VT+   + + C LP++   +         P      L  
Sbjct: 58  DLEKRIVNRIPDDSTEQNLMFVTSKGGQKFACSLPDVEDVKKDKPKSSKNPKIYGDALAA 117

Query: 410 LMNKEMC-SYRLESYWSYEVCHGRYIRQYHEE 502
               + C   R   +WSY +C G+ I Q H E
Sbjct: 118 SFYVDKCVKLRGNHWWSYILCRGQTIEQVHGE 149


>Z81586-9|CAB04699.2|  676|Caenorhabditis elegans Hypothetical
           protein T05F1.11 protein.
          Length = 676

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +2

Query: 482 IRQYHEEREGKQINTQEYFLGYWSSEKQAKLEAEMKAAQESKQIPK 619
           +R+  EE + K++  +E  +   + E + KLEAEM+   E  +I +
Sbjct: 463 VRKLKEEEKRKRVLEEEMEMKRKNEEAKIKLEAEMREKAEQAEIKR 508


>AL021479-3|CAA16324.1|  279|Caenorhabditis elegans Hypothetical
           protein Y22F5A.5 protein.
          Length = 279

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 215 NWPGNPNLNENFVDGEKNKSQNQELVKVTTTNK 313
           NWP NP  N NF++   +++Q   L     TN+
Sbjct: 148 NWPNNPTANVNFINSIISRAQQYGLSVGIYTNQ 180


>L19120-1|AAA28155.1|  815|Caenorhabditis elegans kinesin heavy
           chain protein.
          Length = 815

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +2

Query: 482 IRQYHEEREGKQINTQEYFLGYWSSEKQAKLEAEMKAAQESKQIPKTTKVEGVAL 646
           ++Q H+  + KQ+  + Y +    SEK +K  A+    +E+K I K+    G+ +
Sbjct: 215 VKQEHQTTK-KQLTGKLYLVDLAGSEKVSKTGAQGTVLEEAKNINKSLTALGIVI 268


>L07144-3|AAK21446.1|  815|Caenorhabditis elegans Uncoordinated
           protein 116 protein.
          Length = 815

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +2

Query: 482 IRQYHEEREGKQINTQEYFLGYWSSEKQAKLEAEMKAAQESKQIPKTTKVEGVAL 646
           ++Q H+  + KQ+  + Y +    SEK +K  A+    +E+K I K+    G+ +
Sbjct: 215 VKQEHQTTK-KQLTGKLYLVDLAGSEKVSKTGAQGTVLEEAKNINKSLTALGIVI 268


>AB017163-1|BAA32594.1|  815|Caenorhabditis elegans kinesin Heavy
           chain protein.
          Length = 815

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +2

Query: 482 IRQYHEEREGKQINTQEYFLGYWSSEKQAKLEAEMKAAQESKQIPKTTKVEGVAL 646
           ++Q H+  + KQ+  + Y +    SEK +K  A+    +E+K I K+    G+ +
Sbjct: 215 VKQEHQTTK-KQLTGKLYLVDLAGSEKVSKTGAQGTVLEEAKNINKSLTALGIVI 268


>AF078788-3|AAC26966.1|  547|Caenorhabditis elegans Hypothetical
           protein ZC190.6 protein.
          Length = 547

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -3

Query: 583 FSLQLSLLFRAPISQEIFLGVDLFALSFFVILPDIPSMAYFIAPIAFQSV*THF 422
           FSL  S++     S  + +G D+F+ +  + L DI S  + I  IA+Q   +H+
Sbjct: 127 FSLLGSIIISIGFSYTVHMGQDMFSPTVAMTLVDISSCIFLI--IAWQKSLSHY 178


>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
           protein D1007.15 protein.
          Length = 1184

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 296 VTTTNKESYECQLPELRSTESTSIDDYDGP 385
           + T N+    CQLP L    S S+D++ GP
Sbjct: 472 IATANRRCV-CQLPSLLGFTSKSLDNFQGP 500


>Z70035-11|CAA93872.1|  388|Caenorhabditis elegans Hypothetical
           protein R09D1.13 protein.
          Length = 388

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +2

Query: 365 IDDYDGPSPLHLLKPLMNKEMCSYRLESYWSYEVC 469
           ID  D P PL+ + P    E+        WS+ VC
Sbjct: 258 IDSMDTPVPLYWMAPESYNELIFNEKTDVWSFGVC 292


>AC084159-15|AAK39353.1|  418|Caenorhabditis elegans Hypothetical
           protein Y73B3A.13 protein.
          Length = 418

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 22/73 (30%), Positives = 30/73 (41%)
 Frame = +2

Query: 260 EKNKSQNQELVKVTTTNKESYECQLPELRSTESTSIDDYDGPSPLHLLKPLMNKEMCSYR 439
           +KN SQ   + KV    K S +      +S E  S+D    P PL   + L  K   S  
Sbjct: 67  KKNPSQPLNIKKVKKVRKNSSDSVCSSKKSGEQASVDQV--PPPLQ--RALCTKSRSSKN 122

Query: 440 LESYWSYEVCHGR 478
            E++   E   GR
Sbjct: 123 SENFLYLENAVGR 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,439,926
Number of Sequences: 27780
Number of extensions: 275838
Number of successful extensions: 894
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)