Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14j23
         (603 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77720-1|AAC51323.1| 1214|Homo sapiens transmembrane protein Jag...    31   4.1  
U73936-1|AAC52020.1| 1218|Homo sapiens Jagged 1 protein.               31   4.1  
U61276-1|AAB39007.1| 1218|Homo sapiens transmembrane protein Jag...    31   4.1  
EF175388-1|ABM53220.1|  101|Homo sapiens immunoglobulin heavy ch...    31   4.1  
BC126207-1|AAI26208.1| 1218|Homo sapiens jagged 1 (Alagille synd...    31   4.1  
BC126205-1|AAI26206.1| 1218|Homo sapiens jagged 1 (Alagille synd...    31   4.1  
BC098393-1|AAH98393.1| 1218|Homo sapiens jagged 1 (Alagille synd...    31   4.1  
AL035456-3|CAC07198.1| 1218|Homo sapiens jagged 1 (Alagille synd...    31   4.1  
AF028593-1|AAB84053.1| 1218|Homo sapiens transmembrane protein J...    31   4.1  
AF003837-1|AAC51731.1| 1218|Homo sapiens Jagged1 protein.              31   4.1  

>U77720-1|AAC51323.1| 1214|Homo sapiens transmembrane protein Jagged
           protein.
          Length = 1214

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 379 NYYYGLECKSYCNPRDFTF 323
           +YYYG  C  +C PRD  F
Sbjct: 176 DYYYGFGCNKFCRPRDDFF 194


>U73936-1|AAC52020.1| 1218|Homo sapiens Jagged 1 protein.
          Length = 1218

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 379 NYYYGLECKSYCNPRDFTF 323
           +YYYG  C  +C PRD  F
Sbjct: 189 DYYYGFGCNKFCRPRDDFF 207


>U61276-1|AAB39007.1| 1218|Homo sapiens transmembrane protein Jagged
           1 protein.
          Length = 1218

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 379 NYYYGLECKSYCNPRDFTF 323
           +YYYG  C  +C PRD  F
Sbjct: 189 DYYYGFGCNKFCRPRDDFF 207


>EF175388-1|ABM53220.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 433 YCLNINF*PSLTVVPASVNYYYGLE 359
           YC  +   P + VVPA++ YYYG++
Sbjct: 72  YCARVT--PDIVVVPAAIAYYYGMD 94


>BC126207-1|AAI26208.1| 1218|Homo sapiens jagged 1 (Alagille
           syndrome) protein.
          Length = 1218

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 379 NYYYGLECKSYCNPRDFTF 323
           +YYYG  C  +C PRD  F
Sbjct: 189 DYYYGFGCNKFCRPRDDFF 207


>BC126205-1|AAI26206.1| 1218|Homo sapiens jagged 1 (Alagille
           syndrome) protein.
          Length = 1218

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 379 NYYYGLECKSYCNPRDFTF 323
           +YYYG  C  +C PRD  F
Sbjct: 189 DYYYGFGCNKFCRPRDDFF 207


>BC098393-1|AAH98393.1| 1218|Homo sapiens jagged 1 (Alagille
           syndrome) protein.
          Length = 1218

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 379 NYYYGLECKSYCNPRDFTF 323
           +YYYG  C  +C PRD  F
Sbjct: 189 DYYYGFGCNKFCRPRDDFF 207


>AL035456-3|CAC07198.1| 1218|Homo sapiens jagged 1 (Alagille
           syndrome) protein.
          Length = 1218

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 379 NYYYGLECKSYCNPRDFTF 323
           +YYYG  C  +C PRD  F
Sbjct: 189 DYYYGFGCNKFCRPRDDFF 207


>AF028593-1|AAB84053.1| 1218|Homo sapiens transmembrane protein
           Jagged 1 protein.
          Length = 1218

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 379 NYYYGLECKSYCNPRDFTF 323
           +YYYG  C  +C PRD  F
Sbjct: 189 DYYYGFGCNKFCRPRDDFF 207


>AF003837-1|AAC51731.1| 1218|Homo sapiens Jagged1 protein.
          Length = 1218

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 379 NYYYGLECKSYCNPRDFTF 323
           +YYYG  C  +C PRD  F
Sbjct: 189 DYYYGFGCNKFCRPRDDFF 207


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,224,974
Number of Sequences: 237096
Number of extensions: 1591667
Number of successful extensions: 7057
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7057
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)