Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14j10
         (318 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53337-2|AAA96184.1|  639|Caenorhabditis elegans Hypothetical pr...    28   1.3  
U39994-1|AAB37019.1|  326|Caenorhabditis elegans Hypothetical pr...    27   2.2  
U10438-6|AAA19087.1|  429|Caenorhabditis elegans Hypothetical pr...    26   5.1  
Z67738-2|CAA91546.2|  482|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z49068-4|CAC42319.1|  705|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z49068-3|CAA88862.1|  650|Caenorhabditis elegans Hypothetical pr...    26   6.8  
U40799-8|AAA81487.1|  552|Caenorhabditis elegans Hypothetical pr...    25   8.9  

>U53337-2|AAA96184.1|  639|Caenorhabditis elegans Hypothetical
           protein R02E12.4 protein.
          Length = 639

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 191 MECGKCCEINHSQIIFLDCCHTL 123
           ++C  C ++NH  + FL C H++
Sbjct: 24  VQCHICFQVNHEPVTFLTCKHSI 46


>U39994-1|AAB37019.1|  326|Caenorhabditis elegans Hypothetical
           protein C48C5.3 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 235 LLLIKFCFPFIKLSGWNVANVVK*ITAK*YFLTAVTLSNSSQNV 104
           LLL  FC+P  +L    +    + I    +FLT V LS SS ++
Sbjct: 76  LLLTSFCYPIEQLREQEIIKPPQWINVAQHFLTWVGLSASSASL 119


>U10438-6|AAA19087.1|  429|Caenorhabditis elegans Hypothetical
           protein B0280.9 protein.
          Length = 429

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 15/69 (21%), Positives = 34/69 (49%)
 Frame = -3

Query: 238 KLLLIKFCFPFIKLSGWNVANVVK*ITAK*YFLTAVTLSNSSQNVKFRKQHRQQRWLLTA 59
           +L  I     F+ ++G N    V   T+  + +T ++L  ++  +KF   H ++ W++  
Sbjct: 215 RLFAISHDSQFLAIAGHNSHIYVLHATSMEH-ITTISLPANASEIKFFPSHSREIWIICE 273

Query: 58  DRQI*VMSV 32
             QI + ++
Sbjct: 274 TGQIVIANI 282


>Z67738-2|CAA91546.2|  482|Caenorhabditis elegans Hypothetical
           protein W03G11.3 protein.
          Length = 482

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 162 IYFTTFATFHPLNLINGKQN 221
           +YF+ F  FHP+ L +GK N
Sbjct: 163 LYFSQFEWFHPMFLDDGKFN 182


>Z49068-4|CAC42319.1|  705|Caenorhabditis elegans Hypothetical
           protein K01C8.3b protein.
          Length = 705

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 95  EAASSTTMVADGGSTNMSDECLRSQNVSRAA 3
           EA +   MVAD   T   ++CL  QN + AA
Sbjct: 564 EAVALEEMVADLNITETPEKCLTRQNSANAA 594


>Z49068-3|CAA88862.1|  650|Caenorhabditis elegans Hypothetical
           protein K01C8.3a protein.
          Length = 650

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 95  EAASSTTMVADGGSTNMSDECLRSQNVSRAA 3
           EA +   MVAD   T   ++CL  QN + AA
Sbjct: 564 EAVALEEMVADLNITETPEKCLTRQNSANAA 594


>U40799-8|AAA81487.1|  552|Caenorhabditis elegans Hypothetical
           protein F42C5.9 protein.
          Length = 552

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 179 CHIPSA*FNKWKTKF 223
           C +PSA F+KW+  F
Sbjct: 139 CRVPSAVFDKWRQSF 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,853,150
Number of Sequences: 27780
Number of extensions: 94511
Number of successful extensions: 233
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 233
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)