Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14i24
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 190 5e-48
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 159 6e-39
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 60 9e-09
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 60 9e-09
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 60 9e-09
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 60 9e-09
AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens ... 58 2e-08
AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein. 58 2e-08
AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression ... 58 4e-08
L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein. 57 5e-08
DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein. 57 6e-08
CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein. 57 6e-08
BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif prote... 57 6e-08
AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif prote... 57 6e-08
AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif prote... 57 6e-08
AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif prote... 57 6e-08
AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif prote... 57 6e-08
AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein pr... 57 6e-08
AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein. 57 6e-08
AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide bind... 57 6e-08
AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mut... 57 6e-08
BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protei... 56 8e-08
AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif prote... 56 8e-08
AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens ... 56 8e-08
AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protei... 56 8e-08
AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide bind... 56 8e-08
AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide bind... 56 8e-08
AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide bind... 56 8e-08
AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide bind... 56 8e-08
AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide bind... 56 8e-08
AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protei... 56 8e-08
AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide bind... 56 8e-08
AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protei... 56 8e-08
X72018-1|CAA50897.1| 570|Homo sapiens ORF protein. 56 1e-07
L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein. 56 1e-07
BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear r... 56 1e-07
BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear r... 56 1e-07
AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens ... 56 1e-07
AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear r... 56 1e-07
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 54 3e-07
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 54 3e-07
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 54 3e-07
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 54 3e-07
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 54 3e-07
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 54 6e-07
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 54 6e-07
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 54 6e-07
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 54 6e-07
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 54 6e-07
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 54 6e-07
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 54 6e-07
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 54 6e-07
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 54 6e-07
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 54 6e-07
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 54 6e-07
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 54 6e-07
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 54 6e-07
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 54 6e-07
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 54 6e-07
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 54 6e-07
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 54 6e-07
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 54 6e-07
U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein. 52 1e-06
U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein. 52 1e-06
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 52 1e-06
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 52 1e-06
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 52 1e-06
BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor, argini... 52 1e-06
BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor, argini... 52 1e-06
BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor, argini... 52 1e-06
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 52 1e-06
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 52 1e-06
AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isof... 52 1e-06
AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isof... 52 1e-06
AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor, argini... 52 1e-06
Z93241-3|CAI19835.1| 421|Homo sapiens protein ( Human DNA seque... 52 2e-06
DQ887818-1|ABI74675.1| 163|Homo sapiens POLDIP3 protein. 52 2e-06
CR456456-1|CAG30342.1| 421|Homo sapiens dJ222E13.3 protein. 52 2e-06
BC095411-1|AAH95411.1| 421|Homo sapiens polymerase (DNA-directe... 52 2e-06
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 52 2e-06
BC056912-1|AAH56912.2| 392|Homo sapiens polymerase (DNA-directe... 52 2e-06
BC049840-1|AAH49840.1| 421|Homo sapiens polymerase (DNA-directe... 52 2e-06
BC001488-1|AAH01488.2| 417|Homo sapiens POLDIP3 protein protein. 52 2e-06
AY422990-1|AAQ94604.1| 421|Homo sapiens RNA-binding protein P46... 52 2e-06
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 52 2e-06
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 52 2e-06
AL160112-1|CAB77059.1| 392|Homo sapiens hypothetical protein pr... 52 2e-06
AL160111-1|CAB77058.1| 421|Homo sapiens hypothetical protein pr... 52 2e-06
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 52 2e-06
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 52 2e-06
AB055760-1|BAB33368.2| 424|Homo sapiens KIAA1649 protein protein. 52 2e-06
BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif prote... 51 4e-06
X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA ... 50 7e-06
U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognit... 50 7e-06
BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein. 50 7e-06
Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein. 49 1e-05
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 49 1e-05
BC014533-1|AAH14533.3| 211|Homo sapiens MYEF2 protein protein. 49 1e-05
BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif prote... 49 1e-05
BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif prote... 49 1e-05
AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear r... 49 1e-05
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 49 1e-05
AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif prote... 49 1e-05
AK002075-1|BAA92070.1| 188|Homo sapiens protein ( Homo sapiens ... 49 1e-05
AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein. 49 1e-05
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 49 2e-05
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 49 2e-05
X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein. 49 2e-05
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 49 2e-05
DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein. 49 2e-05
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 49 2e-05
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 49 2e-05
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 49 2e-05
BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif prote... 49 2e-05
AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif prote... 49 2e-05
AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif prote... 49 2e-05
AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open read... 49 2e-05
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 49 2e-05
AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open read... 49 2e-05
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 49 2e-05
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 48 2e-05
AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific heterog... 48 4e-05
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 47 5e-05
BC026077-1|AAH26077.1| 161|Homo sapiens RBMY2FP protein protein. 47 7e-05
AF069682-1|AAC24858.2| 392|Homo sapiens testes specific heterog... 47 7e-05
U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein. 46 9e-05
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 46 9e-05
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 46 9e-05
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 46 9e-05
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 46 1e-04
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 46 1e-04
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 46 1e-04
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 46 2e-04
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 46 2e-04
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 46 2e-04
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 46 2e-04
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 45 2e-04
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 45 2e-04
BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif prote... 45 2e-04
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 45 2e-04
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 45 2e-04
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 45 2e-04
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 45 2e-04
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 45 2e-04
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 45 2e-04
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 45 2e-04
D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein. 45 3e-04
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 45 3e-04
X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein. 44 4e-04
U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding prot... 44 4e-04
BX537536-1|CAD97776.1| 492|Homo sapiens hypothetical protein pr... 44 4e-04
BC107684-1|AAI07685.1| 387|Homo sapiens PPIL4 protein protein. 44 4e-04
BC064134-1|AAH64134.1| 434|Homo sapiens PPIL4 protein protein. 44 4e-04
BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II... 44 4e-04
BC020986-1|AAH20986.1| 492|Homo sapiens peptidylprolyl isomeras... 44 4e-04
AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II... 44 4e-04
AL357619-2|CAI16471.1| 492|Homo sapiens peptidylprolyl isomeras... 44 4e-04
AL078581-5|CAI19508.1| 492|Homo sapiens peptidylprolyl isomeras... 44 4e-04
AF026564-1|AAC16916.1| 318|Homo sapiens RNA binding protein pro... 44 4e-04
AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein. 44 4e-04
AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein. 44 4e-04
U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein p... 44 5e-04
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 44 5e-04
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 44 5e-04
BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,... 44 5e-04
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 44 5e-04
BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,... 44 5e-04
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 44 5e-04
AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,... 44 5e-04
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 44 5e-04
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 44 5e-04
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 44 5e-04
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 44 6e-04
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 44 6e-04
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 44 6e-04
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 44 6e-04
X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein ... 43 0.001
S62140-1|AAB27102.1| 526|Homo sapiens TLS protein. 43 0.001
CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein. 43 0.001
BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from t(... 43 0.001
BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in t(1... 43 0.001
BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in t(1... 43 0.001
BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in t(1... 43 0.001
AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein. 43 0.001
AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein. 43 0.001
BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementatio... 42 0.001
BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein. 42 0.001
AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation... 42 0.001
AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation... 42 0.001
AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation... 42 0.001
AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation... 42 0.001
AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation... 42 0.001
AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation... 42 0.001
AK000324-1|BAA91086.1| 431|Homo sapiens protein ( Homo sapiens ... 42 0.001
AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating pr... 42 0.001
AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating pr... 42 0.001
AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementatio... 42 0.001
AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementatio... 42 0.001
AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementatio... 42 0.001
X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric ca... 42 0.002
L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein. 42 0.002
L26405-1|AAA58677.1| 359|Homo sapiens huc protein. 42 0.002
BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding pro... 42 0.002
BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,... 42 0.002
BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,... 42 0.002
BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,... 42 0.002
BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding pro... 42 0.002
AY644767-1|AAV85455.1| 156|Homo sapiens cell proliferation-indu... 42 0.002
AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein. 42 0.002
AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor... 42 0.002
AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2 ... 42 0.002
AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein. 42 0.002
M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein. 42 0.003
BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein. 42 0.003
AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein. 42 0.003
AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein. 42 0.003
AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein. 42 0.003
AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein. 42 0.003
AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,... 42 0.003
AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,... 42 0.003
AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,... 42 0.003
AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,... 42 0.003
AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,... 42 0.003
AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,... 42 0.003
AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,... 42 0.003
AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,... 42 0.003
AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,... 42 0.003
AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,... 42 0.003
AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,... 42 0.003
AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,... 42 0.003
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 41 0.003
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 41 0.003
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 41 0.003
D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein ... 41 0.004
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 41 0.004
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 41 0.004
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 41 0.004
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 41 0.004
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 41 0.004
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 41 0.004
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 41 0.004
X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1) ribonucleopro... 40 0.010
X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for ... 40 0.010
X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for ... 40 0.010
M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen... 40 0.010
M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen... 40 0.010
M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small ... 40 0.010
BC064588-1|AAH64588.1| 285|Homo sapiens HNRPM protein protein. 40 0.010
BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif prote... 40 0.010
BC008895-1|AAH08895.2| 425|Homo sapiens HNRPM protein protein. 40 0.010
BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear ribonucle... 40 0.010
AP001660-1|BAA95545.1| 281|Homo sapiens RBM11 protein. 40 0.010
AK002015-1|BAA92036.1| 267|Homo sapiens protein ( Homo sapiens ... 40 0.010
AF156098-1|AAD39257.1| 266|Homo sapiens RNA binding motif prote... 40 0.010
AB209753-1|BAD92990.1| 155|Homo sapiens Hypothetical protein FL... 40 0.010
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 39 0.014
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 39 0.014
BC070262-1|AAH70262.1| 266|Homo sapiens RNA binding motif prote... 39 0.014
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 39 0.018
BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein. 39 0.018
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 39 0.018
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 39 0.018
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 39 0.018
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 39 0.018
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 38 0.024
X16850-1|CAA34747.1| 396|Homo sapiens myoblast antigen 24.1D5 p... 38 0.024
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 38 0.024
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 38 0.024
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 38 0.024
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 38 0.024
BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein. 38 0.032
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 38 0.032
BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for IM... 38 0.032
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 38 0.032
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 38 0.032
AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein. 38 0.032
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 38 0.042
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 38 0.042
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 38 0.042
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 38 0.042
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 38 0.042
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 38 0.042
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 38 0.042
X56597-1|CAA39935.1| 321|Homo sapiens fibrillarin protein. 37 0.055
U36619-1|AAC16921.1| 176|Homo sapiens Y-chromosome RNA recognit... 37 0.055
M59849-1|AAA52453.1| 321|Homo sapiens fibrillarin protein. 37 0.055
CR457069-1|CAG33350.1| 321|Homo sapiens FBL protein. 37 0.055
BT020144-1|AAV38946.1| 321|Homo sapiens fibrillarin protein. 37 0.055
BT006830-1|AAP35476.1| 321|Homo sapiens fibrillarin protein. 37 0.055
BC019260-1|AAH19260.1| 321|Homo sapiens fibrillarin protein. 37 0.055
BC013115-1|AAH13115.1| 358|Homo sapiens RBM9 protein protein. 37 0.055
AC006950-1|AAD15623.1| 227|Homo sapiens FBRL_HUMAN [AA 1- 227] ... 37 0.055
AC005393-3|AAC28913.1| 318|Homo sapiens FBRL_HUMAN protein. 37 0.055
BC126261-1|AAI26262.1| 593|Homo sapiens FLJ20273 protein protein. 37 0.073
BC034402-1|AAH34402.1| 497|Homo sapiens FLJ20273 protein protein. 37 0.073
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 37 0.073
BC018637-1|AAH18637.2| 423|Homo sapiens DDX50 protein protein. 37 0.073
AK000280-1|BAA91049.1| 524|Homo sapiens protein ( Homo sapiens ... 37 0.073
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 37 0.073
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 37 0.073
AF262323-1|AAM21973.1| 593|Homo sapiens RNA-binding protein pro... 37 0.073
X06347-1|CAA29653.1| 282|Homo sapiens protein ( Human mRNA for ... 36 0.13
M60784-1|AAA61245.1| 282|Homo sapiens U1 snRNP-specific protein... 36 0.13
BC008290-1|AAH08290.1| 282|Homo sapiens small nuclear ribonucle... 36 0.13
BC003413-1|AAH03413.1| 217|Homo sapiens nucleolar protein famil... 36 0.13
BC000405-1|AAH00405.1| 282|Homo sapiens small nuclear ribonucle... 36 0.13
AY780787-1|AAV98357.1| 199|Homo sapiens nucleolar protein famil... 36 0.13
AJ276003-1|CAB76563.1| 217|Homo sapiens GAR1 protein protein. 36 0.13
AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein. 36 0.17
U80746-1|AAB91444.1| 358|Homo sapiens CAGH4 protein. 35 0.22
U78027-1|AAB64202.1| 449|Homo sapiens FTP3 protein. 35 0.22
U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein ... 35 0.22
U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein ... 35 0.22
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 35 0.22
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 35 0.22
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 35 0.22
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 35 0.22
BC130345-1|AAI30346.1| 449|Homo sapiens heterogeneous nuclear r... 35 0.22
BC130343-1|AAI30344.1| 449|Homo sapiens heterogeneous nuclear r... 35 0.22
BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isof... 35 0.22
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 35 0.22
BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 35 0.22
BC068008-1|AAH68008.1| 407|Homo sapiens TNRC4 protein protein. 35 0.22
BC063533-1|AAH63533.1| 362|Homo sapiens apoptosis, caspase acti... 35 0.22
BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein. 35 0.22
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 35 0.22
BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 35 0.22
BC010488-1|AAH10488.1| 362|Homo sapiens apoptosis, caspase acti... 35 0.22
BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 35 0.22
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 35 0.22
AL589765-5|CAI17168.1| 465|Homo sapiens trinucleotide repeat co... 35 0.22
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 35 0.22
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 35 0.22
AL035422-7|CAB55879.2| 449|Homo sapiens heterogeneous nuclear r... 35 0.22
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 35 0.22
AF284423-1|AAG14457.1| 140|Homo sapiens RNA-binding protein BRU... 35 0.22
AF283508-1|AAF91470.1| 362|Homo sapiens cell death regulator av... 35 0.22
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 35 0.22
AB209264-1|BAD92501.1| 441|Homo sapiens trinucleotide repeat co... 35 0.22
X77494-1|CAA54628.1| 389|Homo sapiens MSSP-2 protein. 35 0.29
X64652-1|CAA45923.1| 372|Homo sapiens 348 aa protein protein. 35 0.29
D82361-3|BAA19555.1| 285|Homo sapiens MSSP-2 protein. 35 0.29
D82361-2|BAA19554.1| 288|Homo sapiens MSSP-2 protein. 35 0.29
D28482-1|BAA05841.1| 403|Homo sapiens SCR2 protein. 35 0.29
BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein. 35 0.29
BC018951-1|AAH18951.1| 406|Homo sapiens RNA binding motif, sing... 35 0.29
BC012993-1|AAH12993.1| 403|Homo sapiens RNA binding motif, sing... 35 0.29
BC012992-1|AAH12992.1| 403|Homo sapiens RNA binding motif, sing... 35 0.29
BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA bindi... 35 0.29
BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA bindi... 35 0.29
AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.29
AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.29
AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.29
AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.29
AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.29
AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.29
AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.29
AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repe... 35 0.29
AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.29
AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.29
AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.29
AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.29
AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repe... 35 0.29
AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repe... 35 0.29
AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.29
AL669934-1|CAI95405.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.29
AL590031-1|CAI39936.2| 1802|Homo sapiens bromodomain and WD repe... 35 0.29
AL512504-2|CAI95143.1| 1802|Homo sapiens bromodomain and WD repe... 35 0.29
AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens ... 35 0.29
AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like f... 35 0.29
AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein BRU... 35 0.29
AC104598-1|AAX93183.1| 188|Homo sapiens unknown protein. 35 0.29
AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA bindi... 35 0.29
X79536-1|CAA56072.1| 320|Homo sapiens hnRNPcore protein A1 prot... 34 0.39
X12671-1|CAA31191.1| 320|Homo sapiens hnrnp a1 protein protein. 34 0.39
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 34 0.39
X04347-1|CAA27874.1| 196|Homo sapiens protein ( Human liver mRN... 34 0.39
M15841-1|AAA36796.1| 225|Homo sapiens protein ( Human U2 small ... 34 0.39
BC121133-1|AAI21134.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.39
BC104237-1|AAI04238.1| 167|Homo sapiens HNRPA1 protein protein. 34 0.39
BC104236-1|AAI04237.1| 167|Homo sapiens HNRPA1 protein protein. 34 0.39
BC074502-1|AAH74502.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.39
BC073162-1|AAH73162.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.39
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.39
BC070315-1|AAH70315.1| 320|Homo sapiens HNRPA1 protein protein. 34 0.39
BC052296-1|AAH52296.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.39
BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein. 34 0.39
BC036737-1|AAH36737.1| 225|Homo sapiens small nuclear ribonucle... 34 0.39
BC033714-1|AAH33714.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.39
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 34 0.39
BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for IM... 34 0.39
BC018022-1|AAH18022.1| 225|Homo sapiens small nuclear ribonucle... 34 0.39
BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein. 34 0.39
BC012158-1|AAH12158.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.39
BC009600-1|AAH09600.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.39
BC008311-1|AAH08311.1| 109|Homo sapiens Similar to small nuclea... 34 0.39
BC004945-1|AAH04945.1| 298|Homo sapiens Unknown (protein for IM... 34 0.39
BC002355-1|AAH02355.1| 320|Homo sapiens heterogeneous nuclear r... 34 0.39
BC000272-1|AAH00272.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 34 0.39
BC000210-1|AAH00210.1| 467|Homo sapiens DDX50 protein protein. 34 0.39
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 34 0.39
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 34 0.39
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 34 0.39
AL359844-2|CAH72376.1| 737|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 34 0.39
AL137423-1|CAB70733.1| 399|Homo sapiens hypothetical protein pr... 34 0.39
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 34 0.39
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 34 0.39
AL034428-1|CAB38777.2| 225|Homo sapiens small nuclear ribonucle... 34 0.39
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 34 0.39
AF334103-1|AAK29402.1| 737|Homo sapiens nucleolar protein GU2 p... 34 0.39
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 34 0.39
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 34 0.39
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 34 0.39
X71427-1|CAA50558.1| 462|Homo sapiens FUS-CHOP protein fusion p... 34 0.51
U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNO... 34 0.51
S62138-1|AAB27103.1| 462|Homo sapiens TLS-CHOP protein. 34 0.51
L22009-1|AAA91346.1| 449|Homo sapiens hnRNP H protein. 34 0.51
D28483-1|BAA05842.1| 407|Homo sapiens SCR3 protein. 34 0.51
CR456778-1|CAG33059.1| 449|Homo sapiens HNRPH1 protein. 34 0.51
BC072679-1|AAH72679.1| 407|Homo sapiens RNA binding motif, sing... 34 0.51
BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein. 34 0.51
BC028588-1|AAH28588.1| 533|Homo sapiens hypothetical protein MG... 34 0.51
BC027863-1|AAH27863.1| 407|Homo sapiens RNA binding motif, sing... 34 0.51
BC001348-1|AAH01348.1| 449|Homo sapiens HNRPH1 protein protein. 34 0.51
AL845289-4|CAI12301.1| 129|Homo sapiens poly(A) binding protein... 34 0.51
AL365277-5|CAI16415.1| 129|Homo sapiens poly(A) binding protein... 34 0.51
AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA... 34 0.51
AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA... 34 0.51
AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA... 34 0.51
AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA... 34 0.51
AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma apoptosis... 34 0.51
AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma apoptosis... 34 0.51
AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma apoptosis... 34 0.51
AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma apoptosis... 34 0.51
AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA b... 34 0.51
AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA b... 34 0.51
AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma apoptosis... 34 0.51
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 33 0.68
BC117315-1|AAI17316.1| 433|Homo sapiens RBMS3 protein protein. 33 0.68
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 33 0.68
AY236872-1|AAP75556.1| 419|Homo sapiens RNA binding motif singl... 33 0.68
AY236871-1|AAP75555.1| 437|Homo sapiens RNA binding motif singl... 33 0.68
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 33 0.68
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 33 0.68
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 33 0.68
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 33 0.68
AF023259-1|AAC63910.1| 411|Homo sapiens RNA-binding protein pro... 33 0.68
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 33 0.68
U07231-1|AAC95399.1| 424|Homo sapiens G-rich sequence factor-1 ... 33 1.2
BC108266-1|AAI08267.1| 320|Homo sapiens heterogeneous nuclear r... 33 1.2
AL137058-3|CAI16736.1| 320|Homo sapiens protein ( Human DNA seq... 33 1.2
AK127161-1|BAC86863.1| 447|Homo sapiens protein ( Homo sapiens ... 33 1.2
AK090755-1|BAC03513.1| 415|Homo sapiens protein ( Homo sapiens ... 33 1.2
L38696-1|AAC28898.1| 291|Homo sapiens autoantigen p542 protein. 32 1.6
L32610-1|AAD45179.1| 346|Homo sapiens ribonucleoprotein protein. 32 1.6
D82351-1|BAA11561.1| 373|Homo sapiens MSSP-1 protein. 32 1.6
BC105018-1|AAI05019.1| 306|Homo sapiens RNA binding protein, au... 32 1.6
BC103753-1|AAI03754.1| 307|Homo sapiens RNA binding protein, au... 32 1.6
BC039824-1|AAH39824.1| 331|Homo sapiens heterogeneous nuclear r... 32 1.6
BC004511-1|AAH04511.2| 207|Homo sapiens HNRPH3 protein protein. 32 1.6
AL117395-1|CAB55897.1| 215|Homo sapiens hypothetical protein pr... 32 1.6
AL031668-6|CAB43742.1| 290|Homo sapiens RNA binding protein, au... 32 1.6
AL031668-5|CAI22150.1| 306|Homo sapiens RNA binding protein, au... 32 1.6
AL031668-4|CAI22149.1| 237|Homo sapiens RNA binding protein, au... 32 1.6
AL031668-2|CAI22147.1| 181|Homo sapiens RNA binding protein, au... 32 1.6
AK223441-1|BAD97161.1| 346|Homo sapiens heterogeneous nuclear r... 32 1.6
AK222915-1|BAD96635.1| 307|Homo sapiens RNA binding protein (au... 32 1.6
AK096015-1|BAC04674.1| 378|Homo sapiens protein ( Homo sapiens ... 32 1.6
AF148457-1|AAF04487.1| 306|Homo sapiens heterogeneous nuclear r... 32 1.6
AF132364-1|AAF68852.1| 139|Homo sapiens hnRNP 2H9E protein. 32 1.6
AF132363-1|AAF68851.1| 145|Homo sapiens hnRNP 2H9D protein. 32 1.6
AF132362-1|AAF68850.1| 297|Homo sapiens hnRNP 2H9B protein. 32 1.6
AF132361-1|AAF68849.1| 331|Homo sapiens hnRNP 2H9A protein. 32 1.6
AF132360-6|AAF68846.1| 139|Homo sapiens hnRNP 2H9E protein. 32 1.6
AF132360-5|AAF68845.1| 145|Homo sapiens hnRNP 2H9D protein. 32 1.6
AF132360-4|AAF68848.1| 215|Homo sapiens hnRNP 2H9C protein. 32 1.6
AF132360-3|AAF68844.1| 297|Homo sapiens hnRNP 2H9B protein. 32 1.6
AF132360-2|AAF68847.1| 331|Homo sapiens hnRNP 2H9A protein. 32 1.6
AF132360-1|AAF68843.1| 346|Homo sapiens hnRNP 2H9 protein. 32 1.6
AB208902-1|BAD92139.1| 300|Homo sapiens fusion (involved in t(1... 32 1.6
S75762-1|AAB32714.2| 195|Homo sapiens FUS-CHOP fusion protein p... 32 2.1
D50928-1|BAA09487.2| 962|Homo sapiens KIAA0138 protein. 32 2.1
BC025279-1|AAH25279.1| 528|Homo sapiens SAFB2 protein protein. 32 2.1
BC014784-1|AAH14784.1| 526|Homo sapiens Unknown (protein for IM... 32 2.1
AC004611-1|AAC14666.1| 953|Homo sapiens KIAA0138 protein. 32 2.1
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 32 2.1
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 32 2.1
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 31 2.7
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 31 2.7
BC080591-1|AAH80591.1| 189|Homo sapiens HNRPA3 protein protein. 31 2.7
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 31 2.7
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 31 2.7
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 31 2.7
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 31 2.7
AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 31 2.7
AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 31 2.7
AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 31 2.7
AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 31 2.7
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 31 3.6
BC103507-1|AAI03508.1| 969|Homo sapiens RBM15 protein protein. 31 3.6
>BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein.
Length = 257
Score = 190 bits (462), Expect = 5e-48
Identities = 112/196 (57%), Positives = 132/196 (67%), Gaps = 13/196 (6%)
Frame = +3
Query: 105 MVDQIEMALDDIIKANKKTRIGGGAGR-KFDANKRTGRGGGA--GFRSNRSGGVQRGR-- 269
M D+++M+LDDIIK N+ R G G GR + A + GRGGGA R NR GG R R
Sbjct: 1 MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA 60
Query: 270 ------NRGGITKSTNYSRG-DVNSTWKHDMFND-FGERKLQRNSGTITTGPTKLLVSNL 425
GG + YSR + W+HD+F+ FG +G T G KLLVSNL
Sbjct: 61 IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGG-----GAGVETGG--KLLVSNL 113
Query: 426 DFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLDG 605
DFGVSD+DI+ELF+EFG LK A+VHYDRSGRSLGTADV FERKADA+KAMKQYNGVPLDG
Sbjct: 114 DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG 173
Query: 606 RAMNIQLATSEINTLR 653
R MNIQL TS+I+ R
Sbjct: 174 RPMNIQLVTSQIDAQR 189
>AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional
coactivator ALY protein.
Length = 233
Score = 159 bits (387), Expect = 6e-39
Identities = 98/172 (56%), Positives = 112/172 (65%), Gaps = 12/172 (6%)
Frame = +3
Query: 174 GAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGR--------NRGGITKSTNYSR-GDVN 320
G GR A R GR GGA R NR GG R R GG + YSR +
Sbjct: 4 GRGR---AGSRAGRRGGAQAAARVNRGGGPIRNRPAIARGAAGGGGRNRPAPYSRPKQLP 60
Query: 321 STWKHDMFND-FGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASV 497
W+HD+F+ FG +G T G KLLVSNLDFGVSD+DI+ELF+EFG LK A+V
Sbjct: 61 DKWQHDLFDSGFG-----GGAGVETGG--KLLVSNLDFGVSDADIQELFAEFGTLKKAAV 113
Query: 498 HYDRSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
HYDRSGRSLGTA+V FERKADA+KAMKQYNG PLDGR MNIQL TS+I+ R
Sbjct: 114 HYDRSGRSLGTANVHFERKADALKAMKQYNGFPLDGRPMNIQLVTSQIDAQR 165
>U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein.
Length = 282
Score = 59.7 bits (138), Expect = 9e-09
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMK 578
T L V L ++ D++E+FS +G L +V YD R+GRS G A V FER D+ +AM+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 178
Query: 579 QYNGVPLDGRAMNIQLA-TSEINTLRP 656
+ NG+ LDGR + + + T +T P
Sbjct: 179 RANGMELDGRRIRVDYSITKRAHTPTP 205
>BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha
protein.
Length = 282
Score = 59.7 bits (138), Expect = 9e-09
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMK 578
T L V L ++ D++E+FS +G L +V YD R+GRS G A V FER D+ +AM+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 178
Query: 579 QYNGVPLDGRAMNIQLA-TSEINTLRP 656
+ NG+ LDGR + + + T +T P
Sbjct: 179 RANGMELDGRRIRVDYSITKRAHTPTP 205
>AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein.
Length = 282
Score = 59.7 bits (138), Expect = 9e-09
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMK 578
T L V L ++ D++E+FS +G L +V YD R+GRS G A V FER D+ +AM+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 178
Query: 579 QYNGVPLDGRAMNIQLA-TSEINTLRP 656
+ NG+ LDGR + + + T +T P
Sbjct: 179 RANGMELDGRRIRVDYSITKRAHTPTP 205
>AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activating
protein protein.
Length = 282
Score = 59.7 bits (138), Expect = 9e-09
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMK 578
T L V L ++ D++E+FS +G L +V YD R+GRS G A V FER D+ +AM+
Sbjct: 119 TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAME 178
Query: 579 QYNGVPLDGRAMNIQLA-TSEINTLRP 656
+ NG+ LDGR + + + T +T P
Sbjct: 179 RANGMELDGRRIRVDYSITKRAHTPTP 205
>AK023133-1|BAB14421.1| 576|Homo sapiens protein ( Homo sapiens
cDNA FLJ13071 fis, clone NT2RP3001792, moderately
similar to HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 576
Score = 58.4 bits (135), Expect = 2e-08
Identities = 28/73 (38%), Positives = 45/73 (61%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
+ V+NLDF V +KE+FS G +K A + D+ G+S G V FE+ +AV+A+ +N
Sbjct: 235 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFN 294
Query: 588 GVPLDGRAMNIQL 626
G L R M++++
Sbjct: 295 GQFLFDRPMHVKM 307
Score = 48.8 bits (111), Expect = 2e-05
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Frame = +3
Query: 216 GGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGT--- 386
GGG G ++ +GG+ G +R ++ S + + + + + D G SG
Sbjct: 436 GGGMGGMNSVTGGMGMGLDR--MSSSFDRMGPGIGAILERSIDMDRGFLSGPMGSGMRER 493
Query: 387 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 566
I + ++ V NL F ++ +KE FS+ G + A + + +G+S G V F+ A
Sbjct: 494 IGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME-NGKSKGCGTVRFDSPESAE 552
Query: 567 KAMKQYNGVPLDGRAMNIQL 626
KA + NG+ + GR ++++L
Sbjct: 553 KACRIMNGIKISGREIDVRL 572
Score = 39.9 bits (89), Expect = 0.008
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 237 SNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGT-ITTGPTK-- 407
S+ S GV+ + + ++ S K + F+ + + K NSGT GP +
Sbjct: 46 SSSSNGVKMENDESAKEEKSDLKEKSTGSK-KANRFHPYSKDK---NSGTGEKKGPNRNR 101
Query: 408 LLVSNLDFGVSDSDIKELFSE-FGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
+ +SN+ + + IK+L E G + + D G+S G V F+ + KA++
Sbjct: 102 VFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETM 161
Query: 585 NGVPLDGRAMNIQ 623
N L GR +NI+
Sbjct: 162 NKYDLSGRPLNIK 174
>AB037762-1|BAA92579.1| 620|Homo sapiens KIAA1341 protein protein.
Length = 620
Score = 58.4 bits (135), Expect = 2e-08
Identities = 28/73 (38%), Positives = 45/73 (61%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
+ V+NLDF V +KE+FS G +K A + D+ G+S G V FE+ +AV+A+ +N
Sbjct: 255 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQAISMFN 314
Query: 588 GVPLDGRAMNIQL 626
G L R M++++
Sbjct: 315 GQFLFDRPMHVKM 327
Score = 52.8 bits (121), Expect = 1e-06
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Frame = +3
Query: 165 IGGGAGRKFDANKR---TGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 335
IGG AGR +N +G GG G ++ +GG+ G +R ++ S + + + +
Sbjct: 460 IGGFAGRIGSSNMGPVGSGISGGMGSMNSVTGGMGMGLDR--MSSSFDRMGPGIGAILER 517
Query: 336 DMFNDFGERKLQRNSGT---ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
+ D G SG I + ++ V NL F ++ +KE FS+ G + A + +
Sbjct: 518 SIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME 577
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 626
+G+S G V F+ A KA + NG+ + GR ++++L
Sbjct: 578 -NGKSKGCGTVRFDSPESAEKACRIMNGIKISGREIDVRL 616
Score = 39.9 bits (89), Expect = 0.008
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = +3
Query: 237 SNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGT-ITTGPTK-- 407
S+ S GV+ + + ++ S K + F+ + + K NSGT GP +
Sbjct: 66 SSSSNGVKMENDESAKEEKSDLKEKSTGSK-KANRFHPYSKDK---NSGTGEKKGPNRNR 121
Query: 408 LLVSNLDFGVSDSDIKELFSE-FGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
+ +SN+ + + IK+L E G + + D G+S G V F+ + KA++
Sbjct: 122 VFISNIPYDMKWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETM 181
Query: 585 NGVPLDGRAMNIQ 623
N L GR +NI+
Sbjct: 182 NKYDLSGRPLNIK 194
>AF106685-1|AAD43038.1| 547|Homo sapiens myelin gene expression
factor 2 protein.
Length = 547
Score = 57.6 bits (133), Expect = 4e-08
Identities = 28/73 (38%), Positives = 45/73 (61%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
+ V+NLDF V +KE+FS G +K+ S D+ G+S G V FE+ +AV+A+ +N
Sbjct: 182 IFVANLDFKVGWKKLKEVFSIAGTVKAGSYKEDKDGKSRGMGTVTFEQAIEAVQAISMFN 241
Query: 588 GVPLDGRAMNIQL 626
G L R M++++
Sbjct: 242 GQFLFDRPMHVKM 254
Score = 50.8 bits (116), Expect = 4e-06
Identities = 43/160 (26%), Positives = 77/160 (48%), Gaps = 6/160 (3%)
Frame = +3
Query: 165 IGGGAGRKFDANKR---TGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 335
IGG GR +N +G GG G ++ +GG+ G +R ++ S + + + +
Sbjct: 387 IGGITGRIGSSNMGPVGSGISGGMGSMNSVTGGMGMGLDR--MSSSFDRMGPGIGAILER 444
Query: 336 DMFNDFGERKLQRNSGT---ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
+ D G SG I + ++ V NL F ++ +KE FS+ G + A + +
Sbjct: 445 SIDMDRGFLSGPMGSGMRERIGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME 504
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 626
+G+S G V F+ A KA + NG+ + GR ++++L
Sbjct: 505 -NGKSKGCGTVRFDSPESAEKACRIMNGIKISGREIDVRL 543
>L32611-1|AAL31359.1| 691|Homo sapiens ribonucleoprotein protein.
Length = 691
Score = 57.2 bits (132), Expect = 5e-08
Identities = 33/99 (33%), Positives = 57/99 (57%)
Frame = +3
Query: 330 KHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR 509
K D + R +Q+ +G + G T + V+NLD+ V +KE+FS G++ A + D+
Sbjct: 145 KEDPDGEHARRAMQK-AGRL--GST-VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK 200
Query: 510 SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 626
G+S G V FE+ +AV+A+ +NG L R M++++
Sbjct: 201 DGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKM 239
Score = 39.5 bits (88), Expect = 0.010
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
++ V NL F + +K+ F+E G + A + + +G+S G V FE A +A +
Sbjct: 615 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME-NGKSKGCGVVKFESPEVAERACRMM 673
Query: 585 NGVPLDGRAMNIQL 626
NG+ L GR +++++
Sbjct: 674 NGMKLSGREIDVRI 687
>DQ778625-1|ABG77459.1| 451|Homo sapiens unknown protein.
Length = 451
Score = 56.8 bits (131), Expect = 6e-08
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 554
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 174 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 231
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLATSEINT 647
ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 232 ADADRAREKLHGTVVEGRKIEVNNATARVMT 262
>CR456559-1|CAG30445.1| 376|Homo sapiens RBM9 protein.
Length = 376
Score = 56.8 bits (131), Expect = 6e-08
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 554
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 103 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 160
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLATSEINT 647
ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 161 ADADRAREKLHGTVVEGRKIEVNNATARVMT 191
>BC025281-1|AAH25281.1| 380|Homo sapiens RNA binding motif protein
9 protein.
Length = 380
Score = 56.8 bits (131), Expect = 6e-08
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 554
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 103 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 160
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLATSEINT 647
ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 161 ADADRAREKLHGTVVEGRKIEVNNATARVMT 191
>AY072786-1|AAL67150.1| 390|Homo sapiens RNA binding motif protein
9 protein.
Length = 390
Score = 56.8 bits (131), Expect = 6e-08
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 554
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 113 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 170
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLATSEINT 647
ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 171 ADADRAREKLHGTVVEGRKIEVNNATARVMT 201
>AM419009-1|CAL91352.1| 398|Homo sapiens RNA binding motif protein
9 protein.
Length = 398
Score = 56.8 bits (131), Expect = 6e-08
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 554
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 111 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 168
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLATSEINT 647
ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 169 ADADRAREKLHGTVVEGRKIEVNNATARVMT 199
>AL079295-2|CAI19059.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 56.8 bits (131), Expect = 6e-08
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 554
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 104 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 161
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLATSEINT 647
ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 162 ADADRAREKLHGTVVEGRKIEVNNATARVMT 192
>AL049748-3|CAI20525.1| 367|Homo sapiens RNA binding motif protein
9 protein.
Length = 367
Score = 56.8 bits (131), Expect = 6e-08
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 554
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 104 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 161
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLATSEINT 647
ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 162 ADADRAREKLHGTVVEGRKIEVNNATARVMT 192
>AL009266-1|CAA15842.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 56.8 bits (131), Expect = 6e-08
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 554
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 104 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 161
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLATSEINT 647
ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 162 ADADRAREKLHGTVVEGRKIEVNNATARVMT 192
>AK055213-1|BAB70875.1| 450|Homo sapiens mRNA. protein.
Length = 450
Score = 56.8 bits (131), Expect = 6e-08
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 554
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 173 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 230
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLATSEINT 647
ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 231 ADADRAREKLHGTVVEGRKIEVNNATARVMT 261
>AF229058-1|AAL71905.1| 380|Homo sapiens hexaribonucleotide binding
protein 2 protein.
Length = 380
Score = 56.8 bits (131), Expect = 6e-08
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERK 554
NS + +T P +L VSN+ F D D++++F +FG + + ++ G S G V FE
Sbjct: 103 NSESKST-PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENS 160
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLATSEINT 647
ADA +A ++ +G ++GR + + AT+ + T
Sbjct: 161 ADADRAREKLHGTVVEGRKIEVNNATARVMT 191
>AF061832-1|AAC16002.1| 691|Homo sapiens M4 protein deletion mutant
protein.
Length = 691
Score = 56.8 bits (131), Expect = 6e-08
Identities = 33/99 (33%), Positives = 57/99 (57%)
Frame = +3
Query: 330 KHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR 509
K D + R +Q+ +G + G T + V+NLD+ V +KE+FS G++ A + D+
Sbjct: 145 KEDPDGECARRAMQK-AGRL--GST-VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK 200
Query: 510 SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQL 626
G+S G V FE+ +AV+A+ +NG L R M++++
Sbjct: 201 DGKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKM 239
Score = 39.5 bits (88), Expect = 0.010
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
++ V NL F + +K+ F+E G + A + + +G+S G V FE A +A +
Sbjct: 615 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME-NGKSKGCGVVKFESPEVAERACRMM 673
Query: 585 NGVPLDGRAMNIQL 626
NG+ L GR +++++
Sbjct: 674 NGMKLSGREIDVRI 687
>BC113691-1|AAI13692.1| 395|Homo sapiens ataxin 2-binding protein 1
protein.
Length = 395
Score = 56.4 bits (130), Expect = 8e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 579 QYNGVPLDGRAMNIQLATSEINT 647
+ +G ++GR + + AT+ + T
Sbjct: 195 KLHGTVVEGRKIEVNNATARVMT 217
>AY960684-1|AAX84843.1| 370|Homo sapiens RNA binding motif protein
9 protein.
Length = 370
Score = 56.4 bits (130), Expect = 8e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 110 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 168
Query: 579 QYNGVPLDGRAMNIQLATSEINT 647
+ +G ++GR + + AT+ + T
Sbjct: 169 KLHGTVVEGRKIEVNNATARVMT 191
>AK001027-1|BAA91472.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ10165 fis, clone HEMBA1003591, weakly similar to
CHLOROPLAST 28 KD RIBONUCLEOPROTEIN PRECURSOR. ).
Length = 397
Score = 56.4 bits (130), Expect = 8e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 116 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 174
Query: 579 QYNGVPLDGRAMNIQLATSEINT 647
+ +G ++GR + + AT+ + T
Sbjct: 175 KLHGTVVEGRKIEVNNATARVMT 197
>AF448859-1|AAP41925.1| 370|Homo sapiens ataxin 2-binding protein
variant 1 protein.
Length = 370
Score = 56.4 bits (130), Expect = 8e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 116 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 174
Query: 579 QYNGVPLDGRAMNIQLATSEINT 647
+ +G ++GR + + AT+ + T
Sbjct: 175 KLHGTVVEGRKIEVNNATARVMT 197
>AF229057-1|AAL71904.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 56.4 bits (130), Expect = 8e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 579 QYNGVPLDGRAMNIQLATSEINT 647
+ +G ++GR + + AT+ + T
Sbjct: 195 KLHGTVVEGRKIEVNNATARVMT 217
>AF109120-3|AAL83407.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 56.4 bits (130), Expect = 8e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 579 QYNGVPLDGRAMNIQLATSEINT 647
+ +G ++GR + + AT+ + T
Sbjct: 195 KLHGTVVEGRKIEVNNATARVMT 217
>AF109120-2|AAL83408.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 56.4 bits (130), Expect = 8e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 579 QYNGVPLDGRAMNIQLATSEINT 647
+ +G ++GR + + AT+ + T
Sbjct: 195 KLHGTVVEGRKIEVNNATARVMT 217
>AF109120-1|AAL83409.1| 418|Homo sapiens hexaribonucleotide binding
protein 1 isoform gamma protein.
Length = 418
Score = 56.4 bits (130), Expect = 8e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 579 QYNGVPLDGRAMNIQLATSEINT 647
+ +G ++GR + + AT+ + T
Sbjct: 195 KLHGTVVEGRKIEVNNATARVMT 217
>AF109106-1|AAL83406.1| 395|Homo sapiens hexaribonucleotide binding
protein 1 isoform beta protein.
Length = 395
Score = 56.4 bits (130), Expect = 8e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 579 QYNGVPLDGRAMNIQLATSEINT 647
+ +G ++GR + + AT+ + T
Sbjct: 195 KLHGTVVEGRKIEVNNATARVMT 217
>AF107203-1|AAF78291.1| 377|Homo sapiens ataxin 2-binding protein
protein.
Length = 377
Score = 56.4 bits (130), Expect = 8e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 96 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 154
Query: 579 QYNGVPLDGRAMNIQLATSEINT 647
+ +G ++GR + + AT+ + T
Sbjct: 155 KLHGTVVEGRKIEVNNATARVMT 177
>AF094849-1|AAL83405.1| 392|Homo sapiens hexaribonucleotide binding
protein 1 isoform alpha protein.
Length = 392
Score = 56.4 bits (130), Expect = 8e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 136 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 194
Query: 579 QYNGVPLDGRAMNIQLATSEINT 647
+ +G ++GR + + AT+ + T
Sbjct: 195 KLHGTVVEGRKIEVNNATARVMT 217
>AB208826-1|BAD92063.1| 303|Homo sapiens ataxin 2-binding protein 1
isoform 4 variant protein.
Length = 303
Score = 56.4 bits (130), Expect = 8e-08
Identities = 27/83 (32%), Positives = 48/83 (57%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P +L VSN+ F D D++++F +FG + + ++ G S G V FE ADA +A +
Sbjct: 157 PKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG-SKGFGFVTFENSADADRARE 215
Query: 579 QYNGVPLDGRAMNIQLATSEINT 647
+ +G ++GR + + AT+ + T
Sbjct: 216 KLHGTVVEGRKIEVNNATARVMT 238
>X72018-1|CAA50897.1| 570|Homo sapiens ORF protein.
Length = 570
Score = 56.0 bits (129), Expect = 1e-07
Identities = 26/73 (35%), Positives = 45/73 (61%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
+ V+NLD+ V +KE+FS G++ A + D+ G+S G V FE+ +AV+A+ +N
Sbjct: 46 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFN 105
Query: 588 GVPLDGRAMNIQL 626
G L R M++++
Sbjct: 106 GQLLFDRPMHVKM 118
Score = 39.5 bits (88), Expect = 0.010
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
++ V NL F + +K+ F+E G + A + + +G+S G V FE A +A +
Sbjct: 494 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME-NGKSKGCGVVKFESPEVAERACRMM 552
Query: 585 NGVPLDGRAMNIQL 626
NG+ L GR +++++
Sbjct: 553 NGMKLSGREIDVRI 566
>L03532-1|AAA36192.1| 729|Homo sapiens M4 protein protein.
Length = 729
Score = 56.0 bits (129), Expect = 1e-07
Identities = 26/73 (35%), Positives = 45/73 (61%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
+ V+NLD+ V +KE+FS G++ A + D+ G+S G V FE+ +AV+A+ +N
Sbjct: 205 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFN 264
Query: 588 GVPLDGRAMNIQL 626
G L R M++++
Sbjct: 265 GQLLFDRPMHVKM 277
Score = 39.5 bits (88), Expect = 0.010
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
++ V NL F + +K+ F+E G + A + + +G+S G V FE A +A +
Sbjct: 653 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME-NGKSKGCGVVKFESPEVAERACRMM 711
Query: 585 NGVPLDGRAMNIQL 626
NG+ L GR +++++
Sbjct: 712 NGMKLSGREIDVRI 725
>BC019580-1|AAH19580.1| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 56.0 bits (129), Expect = 1e-07
Identities = 26/73 (35%), Positives = 45/73 (61%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
+ V+NLD+ V +KE+FS G++ A + D+ G+S G V FE+ +AV+A+ +N
Sbjct: 206 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFN 265
Query: 588 GVPLDGRAMNIQL 626
G L R M++++
Sbjct: 266 GQLLFDRPMHVKM 278
Score = 39.5 bits (88), Expect = 0.010
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
++ V NL F + +K+ F+E G + A + + +G+S G V FE A +A +
Sbjct: 654 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME-NGKSKGCGVVKFESPEVAERACRMM 712
Query: 585 NGVPLDGRAMNIQL 626
NG+ L GR +++++
Sbjct: 713 NGMKLSGREIDVRI 726
>BC000138-1|AAH00138.2| 730|Homo sapiens heterogeneous nuclear
ribonucleoprotein M protein.
Length = 730
Score = 56.0 bits (129), Expect = 1e-07
Identities = 26/73 (35%), Positives = 45/73 (61%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
+ V+NLD+ V +KE+FS G++ A + D+ G+S G V FE+ +AV+A+ +N
Sbjct: 206 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFN 265
Query: 588 GVPLDGRAMNIQL 626
G L R M++++
Sbjct: 266 GQLLFDRPMHVKM 278
Score = 39.5 bits (88), Expect = 0.010
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
++ V NL F + +K+ F+E G + A + + +G+S G V FE A +A +
Sbjct: 654 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME-NGKSKGCGVVKFESPEVAERACRMM 712
Query: 585 NGVPLDGRAMNIQL 626
NG+ L GR +++++
Sbjct: 713 NGMKLSGREIDVRI 726
>AK098191-1|BAC05256.1| 252|Homo sapiens protein ( Homo sapiens
cDNA FLJ40872 fis, clone TUTER2000283, highly similar to
Homo sapiens transformer-2-beta (SFRS10) gene. ).
Length = 252
Score = 56.0 bits (129), Expect = 1e-07
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Frame = +3
Query: 183 RKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGER 362
R+ + R+G G+G + + R R+ ++S +YSR D H + R
Sbjct: 12 RESRSASRSGSAHGSGKSARHTPAKSRSRSHRR-SRSRSYSR-DYRRRHSHS-HSPMSTR 68
Query: 363 KLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADV 539
+ + L V L ++ D++E+FS++G + S+ YD+ S RS G A V
Sbjct: 69 RRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 128
Query: 540 VFERKADAVKAMKQYNGVPLDGRAMNIQLATSE 638
FE DA +A ++ NG+ LDGR + + + ++
Sbjct: 129 YFENVDDAKEAKERANGMELDGRRIRVDFSITK 161
>AB209733-1|BAD92970.1| 615|Homo sapiens heterogeneous nuclear
ribonucleoprotein M isoform a variant protein.
Length = 615
Score = 56.0 bits (129), Expect = 1e-07
Identities = 26/73 (35%), Positives = 45/73 (61%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
+ V+NLD+ V +KE+FS G++ A + D+ G+S G V FE+ +AV+A+ +N
Sbjct: 106 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISMFN 165
Query: 588 GVPLDGRAMNIQL 626
G L R M++++
Sbjct: 166 GQLLFDRPMHVKM 178
Score = 39.5 bits (88), Expect = 0.010
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
++ V NL F + +K+ F+E G + A + + +G+S G V FE A +A +
Sbjct: 539 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME-NGKSKGCGVVKFESPEVAERACRMM 597
Query: 585 NGVPLDGRAMNIQL 626
NG+ L GR +++++
Sbjct: 598 NGMKLSGREIDVRI 611
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 54.4 bits (125), Expect = 3e-07
Identities = 28/80 (35%), Positives = 43/80 (53%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N + D +K+LF +FG S V D SG+S G V FER DA KA+ +
Sbjct: 166 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 225
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG L+G+ + + A ++
Sbjct: 226 MNGKELNGKQIYVGRAQKKV 245
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 54.4 bits (125), Expect = 3e-07
Identities = 28/80 (35%), Positives = 43/80 (53%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N + D +K+LF +FG S V D SG+S G V FER DA KA+ +
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG L+G+ + + A ++
Sbjct: 251 MNGKELNGKQIYVGRAQKKV 270
Score = 33.5 bits (73), Expect = 0.68
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPVRI 84
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 54.4 bits (125), Expect = 3e-07
Identities = 28/80 (35%), Positives = 43/80 (53%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N + D +K+LF +FG S V D SG+S G V FER DA KA+ +
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG L+G+ + + A ++
Sbjct: 251 MNGKELNGKQIYVGRAQKKV 270
Score = 33.5 bits (73), Expect = 0.68
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPVRI 84
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 54.4 bits (125), Expect = 3e-07
Identities = 28/80 (35%), Positives = 43/80 (53%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N + D +K+LF +FG S V D SG+S G V FER DA KA+ +
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG L+G+ + + A ++
Sbjct: 251 MNGKELNGKQIYVGRAQKKV 270
Score = 33.5 bits (73), Expect = 0.68
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPVRI 84
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 54.4 bits (125), Expect = 3e-07
Identities = 28/80 (35%), Positives = 43/80 (53%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N + D +K+LF +FG S V D SG+S G V FER DA KA+ +
Sbjct: 191 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG L+G+ + + A ++
Sbjct: 251 MNGKELNGKQIYVGRAQKKV 270
Score = 33.5 bits (73), Expect = 0.68
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPVRI 84
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG + G+ + + A ++
Sbjct: 251 MNGKEISGKIIFVGRAQKKV 270
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPIRI 84
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG + G+ + + A ++
Sbjct: 251 MNGKEISGKIIFVGRAQKKV 270
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPIRI 84
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 2 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 61
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG + G+ + + A ++
Sbjct: 62 MNGKEISGKIIFVGRAQKKV 81
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG + G+ + + A ++
Sbjct: 251 MNGKEISGKIIFVGRAQKKV 270
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPIRI 84
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG + G+ + + A ++
Sbjct: 251 MNGKEISGKIIFVGRAQKKV 270
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPIRI 84
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG + G+ + + A ++
Sbjct: 251 MNGKEISGKIIFVGRAQKKV 270
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPIRI 84
>BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like
(Drosophila) protein.
Length = 283
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +3
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
T P ++ V +DF ++SD+++ FS++G +K + DR+G S G V FE + DA K
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 88
Query: 570 AMKQYNGVPLDGRAMNI 620
+++ + + +NI
Sbjct: 89 ILQEAEKLNYKDKKLNI 105
>AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein.
Length = 289
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +3
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
T P ++ V +DF ++SD+++ FS++G +K + DR+G S G V FE + DA K
Sbjct: 35 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 94
Query: 570 AMKQYNGVPLDGRAMNI 620
+++ + + +NI
Sbjct: 95 ILQEAEKLNYKDKKLNI 111
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG + G+ + + A ++
Sbjct: 251 MNGKEISGKIIFVGRAQKKV 270
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPIRI 84
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG + G+ + + A ++
Sbjct: 251 MNGKEISGKIIFVGRAQKKV 270
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPIRI 84
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG + G+ + + A ++
Sbjct: 251 MNGKEISGKIIFVGRAQKKV 270
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPIRI 84
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG + G+ + + A ++
Sbjct: 251 MNGKEISGKIIFVGRAQKKV 270
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPIRI 84
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG + G+ + + A ++
Sbjct: 251 MNGKEISGKIIFVGRAQKKV 270
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPIRI 84
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 53.6 bits (123), Expect = 6e-07
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N V D +KELFS+FG S V D +G+S G V +E+ DA KA+++
Sbjct: 191 TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEE 250
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG + G+ + + A ++
Sbjct: 251 MNGKEISGKIIFVGRAQKKV 270
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPIRI 84
>AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens
cDNA FLJ36134 fis, clone TESTI2024648, weakly similar to
Homo sapiens germline specific RNA binding protein
(DAZL1) mRNA. ).
Length = 339
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +3
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
T P ++ V +DF ++SD+++ FS++G +K + DR+G S G V FE + DA K
Sbjct: 35 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 94
Query: 570 AMKQYNGVPLDGRAMNI 620
+++ + + +NI
Sbjct: 95 ILQEAEKLNYKDKKLNI 111
>AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens
cDNA FLJ25370 fis, clone TST01870. ).
Length = 283
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +3
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
T P ++ V +DF ++SD+++ FS++G +K + DR+G S G V FE + DA K
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 88
Query: 570 AMKQYNGVPLDGRAMNI 620
+++ + + +NI
Sbjct: 89 ILQEAEKLNYKDKKLNI 105
>AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein.
Length = 283
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +3
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
T P ++ V +DF ++SD+++ FS++G +K + DR+G S G V FE + DA K
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 88
Query: 570 AMKQYNGVPLDGRAMNI 620
+++ + + +NI
Sbjct: 89 ILQEAEKLNYKDKKLNI 105
>AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein.
Length = 283
Score = 53.6 bits (123), Expect = 6e-07
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +3
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
T P ++ V +DF ++SD+++ FS++G +K + DR+G S G V FE + DA K
Sbjct: 29 TVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQK 88
Query: 570 AMKQYNGVPLDGRAMNI 620
+++ + + +NI
Sbjct: 89 ILQEAEKLNYKDKKLNI 105
>U68063-1|AAB08701.1| 288|Homo sapiens transformer-2 beta protein.
Length = 288
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNG 590
V L ++ D++E+FS++G + S+ YD+ S RS G A V FE DA +A ++ NG
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181
Query: 591 VPLDGRAMNIQLATSE 638
+ LDGR + + + ++
Sbjct: 182 MELDGRRIRVDFSITK 197
>U61267-1|AAC28242.1| 288|Homo sapiens htra2-beta protein.
Length = 288
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNG 590
V L ++ D++E+FS++G + S+ YD+ S RS G A V FE DA +A ++ NG
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181
Query: 591 VPLDGRAMNIQLATSE 638
+ LDGR + + + ++
Sbjct: 182 MELDGRRIRVDFSITK 197
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGV 593
+ N + D +K+LF +FG S V D SG+S G V FER DA KA+ + NG
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254
Query: 594 PLDGRAMNIQLATSEI 641
L+G+ + + A ++
Sbjct: 255 ELNGKQIYVGRAQKKV 270
Score = 43.6 bits (98), Expect = 6e-04
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +3
Query: 369 QRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFE 548
QR+ +G + V NLD +++ + + S FG + S +V D +G S G V FE
Sbjct: 88 QRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFE 146
Query: 549 RKADAVKAMKQYNGVPLDGR 608
A +A+K+ NG+ L+GR
Sbjct: 147 THEAAERAIKKMNGMLLNGR 166
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGV 593
+ N + D +K+LF +FG S V D SG+S G V FER DA KA+ + NG
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254
Query: 594 PLDGRAMNIQLATSEI 641
L+G+ + + A ++
Sbjct: 255 ELNGKQIYVGRAQKKV 270
Score = 43.6 bits (98), Expect = 6e-04
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +3
Query: 369 QRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFE 548
QR+ +G + V NLD +++ + + S FG + S +V D +G S G V FE
Sbjct: 88 QRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFE 146
Query: 549 RKADAVKAMKQYNGVPLDGR 608
A +A+K+ NG+ L+GR
Sbjct: 147 THEAAERAIKKMNGMLLNGR 166
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGV 593
+ N + D +K+LF +FG S V D SG+S G V FER DA KA+ + NG
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254
Query: 594 PLDGRAMNIQLATSEI 641
L+G+ + + A ++
Sbjct: 255 ELNGKQIYVGRAQKKV 270
Score = 43.6 bits (98), Expect = 6e-04
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +3
Query: 369 QRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFE 548
QR+ +G + V NLD +++ + + S FG + S +V D +G S G V FE
Sbjct: 88 QRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFE 146
Query: 549 RKADAVKAMKQYNGVPLDGR 608
A +A+K+ NG+ L+GR
Sbjct: 147 THEAAERAIKKMNGMLLNGR 166
>BC005898-1|AAH05898.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNG 590
V L ++ D++E+FS++G + S+ YD+ S RS G A V FE DA +A ++ NG
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181
Query: 591 VPLDGRAMNIQLATSE 638
+ LDGR + + + ++
Sbjct: 182 MELDGRRIRVDFSITK 197
>BC000451-1|AAH00451.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNG 590
V L ++ D++E+FS++G + S+ YD+ S RS G A V FE DA +A ++ NG
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181
Query: 591 VPLDGRAMNIQLATSE 638
+ LDGR + + + ++
Sbjct: 182 MELDGRRIRVDFSITK 197
>BC000160-1|AAH00160.1| 288|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) protein.
Length = 288
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNG 590
V L ++ D++E+FS++G + S+ YD+ S RS G A V FE DA +A ++ NG
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181
Query: 591 VPLDGRAMNIQLATSE 638
+ LDGR + + + ++
Sbjct: 182 MELDGRRIRVDFSITK 197
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGV 593
+ N + D +K+LF +FG S V D SG+S G V FER DA KA+ + NG
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254
Query: 594 PLDGRAMNIQLATSEI 641
L+G+ + + A ++
Sbjct: 255 ELNGKQIYVGRAQKKV 270
Score = 43.6 bits (98), Expect = 6e-04
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +3
Query: 369 QRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFE 548
QR+ +G + V NLD +++ + + S FG + S +V D +G S G V FE
Sbjct: 88 QRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFE 146
Query: 549 RKADAVKAMKQYNGVPLDGR 608
A +A+K+ NG+ L+GR
Sbjct: 147 THEAAERAIKKMNGMLLNGR 166
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYNGV 593
+ N + D +K+LF +FG S V D SG+S G V FER DA KA+ + NG
Sbjct: 195 IKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGK 254
Query: 594 PLDGRAMNIQLATSEI 641
L+G+ + + A ++
Sbjct: 255 ELNGKQIYVGRAQKKV 270
Score = 43.6 bits (98), Expect = 6e-04
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +3
Query: 369 QRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFE 548
QR+ +G + V NLD +++ + + S FG + S +V D +G S G V FE
Sbjct: 88 QRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFE 146
Query: 549 RKADAVKAMKQYNGVPLDGR 608
A +A+K+ NG+ L+GR
Sbjct: 147 THEAAERAIKKMNGMLLNGR 166
>AF057159-3|AAD19278.1| 188|Homo sapiens transformer-2-beta isoform
3 protein.
Length = 188
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNG 590
V L ++ D++E+FS++G + S+ YD+ S RS G A V FE DA +A ++ NG
Sbjct: 22 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 81
Query: 591 VPLDGRAMNIQLATSE 638
+ LDGR + + + ++
Sbjct: 82 MELDGRRIRVDFSITK 97
>AF057159-1|AAD19277.1| 288|Homo sapiens transformer-2-beta isoform
1 protein.
Length = 288
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNG 590
V L ++ D++E+FS++G + S+ YD+ S RS G A V FE DA +A ++ NG
Sbjct: 122 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 181
Query: 591 VPLDGRAMNIQLATSE 638
+ LDGR + + + ++
Sbjct: 182 MELDGRRIRVDFSITK 197
>AB209208-1|BAD92445.1| 278|Homo sapiens splicing factor,
arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) va protein.
Length = 278
Score = 52.4 bits (120), Expect = 1e-06
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNG 590
V L ++ D++E+FS++G + S+ YD+ S RS G A V FE DA +A ++ NG
Sbjct: 110 VFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANG 169
Query: 591 VPLDGRAMNIQLATSE 638
+ LDGR + + + ++
Sbjct: 170 MELDGRRIRVDFSITK 185
>Z93241-3|CAI19835.1| 421|Homo sapiens protein ( Human DNA sequence
from clone RP1-222E13 on chromosome 22. ).
Length = 421
Score = 52.0 bits (119), Expect = 2e-06
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 333
Query: 582 YNGVPLDGRAMNIQL 626
YN LDG+ M L
Sbjct: 334 YNNRCLDGQPMKCNL 348
>DQ887818-1|ABI74675.1| 163|Homo sapiens POLDIP3 protein.
Length = 163
Score = 52.0 bits (119), Expect = 2e-06
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 22 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 75
Query: 582 YNGVPLDGRAMNIQL 626
YN LDG+ M L
Sbjct: 76 YNNRCLDGQPMKCNL 90
>CR456456-1|CAG30342.1| 421|Homo sapiens dJ222E13.3 protein.
Length = 421
Score = 52.0 bits (119), Expect = 2e-06
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 333
Query: 582 YNGVPLDGRAMNIQL 626
YN LDG+ M L
Sbjct: 334 YNNRCLDGQPMKCNL 348
>BC095411-1|AAH95411.1| 421|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 421
Score = 52.0 bits (119), Expect = 2e-06
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 333
Query: 582 YNGVPLDGRAMNIQL 626
YN LDG+ M L
Sbjct: 334 YNNRCLDGQPMKCNL 348
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 52.0 bits (119), Expect = 2e-06
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + V N+ + D +KELF E+G +S V D SG+S G V +E A KA+
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258
Query: 582 YNGVPLDGRAMNIQLATSEINTL 650
+G +DG+ + + A +I L
Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERL 281
Score = 40.3 bits (90), Expect = 0.006
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
+ + NLD ++D +KE FS FG + A V + G+ G V F +A KA+ + N
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMN 362
Query: 588 GVPLDGRAMNIQL 626
G + + +++ L
Sbjct: 363 GRIVGSKPLHVTL 375
Score = 39.5 bits (88), Expect = 0.010
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = +3
Query: 393 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 572
+G + + NLD + + + LFS FG + S V D +G S G A V F+ A A +A
Sbjct: 103 SGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRA 161
Query: 573 MKQYNGVPLDGRAMNI 620
+ NGV L+ R + +
Sbjct: 162 IWHMNGVRLNNRQVYV 177
>BC056912-1|AAH56912.2| 392|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 392
Score = 52.0 bits (119), Expect = 2e-06
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 251 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 304
Query: 582 YNGVPLDGRAMNIQL 626
YN LDG+ M L
Sbjct: 305 YNNRCLDGQPMKCNL 319
>BC049840-1|AAH49840.1| 421|Homo sapiens polymerase (DNA-directed),
delta interacting protein 3 protein.
Length = 421
Score = 52.0 bits (119), Expect = 2e-06
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 333
Query: 582 YNGVPLDGRAMNIQL 626
YN LDG+ M L
Sbjct: 334 YNNRCLDGQPMKCNL 348
>BC001488-1|AAH01488.2| 417|Homo sapiens POLDIP3 protein protein.
Length = 417
Score = 52.0 bits (119), Expect = 2e-06
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 276 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 329
Query: 582 YNGVPLDGRAMNIQL 626
YN LDG+ M L
Sbjct: 330 YNNRCLDGQPMKCNL 344
>AY422990-1|AAQ94604.1| 421|Homo sapiens RNA-binding protein P46
protein.
Length = 421
Score = 52.0 bits (119), Expect = 2e-06
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 333
Query: 582 YNGVPLDGRAMNIQL 626
YN LDG+ M L
Sbjct: 334 YNNRCLDGQPMKCNL 348
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 52.0 bits (119), Expect = 2e-06
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + V N+ + D +KELF E+G +S V D SG+S G V +E A KA+
Sbjct: 35 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 94
Query: 582 YNGVPLDGRAMNIQLATSEINTL 650
+G +DG+ + + A +I L
Sbjct: 95 LHGKSIDGKVLYVGRAQKKIERL 117
Score = 40.3 bits (90), Expect = 0.006
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
+ + NLD ++D +KE FS FG + A V + G+ G V F +A KA+ + N
Sbjct: 140 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMN 198
Query: 588 GVPLDGRAMNIQL 626
G + + +++ L
Sbjct: 199 GRIVGSKPLHVTL 211
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 52.0 bits (119), Expect = 2e-06
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + V N+ + D +KELF E+G +S V D SG+S G V +E A KA+
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258
Query: 582 YNGVPLDGRAMNIQLATSEINTL 650
+G +DG+ + + A +I L
Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERL 281
Score = 40.3 bits (90), Expect = 0.006
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
+ + NLD ++D +KE FS FG + A V + G+ G V F +A KA+ + N
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMN 362
Query: 588 GVPLDGRAMNIQL 626
G + + +++ L
Sbjct: 363 GRIVGSKPLHVTL 375
Score = 39.5 bits (88), Expect = 0.010
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = +3
Query: 393 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 572
+G + + NLD + + + LFS FG + S V D +G S G A V F+ A A +A
Sbjct: 103 SGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRA 161
Query: 573 MKQYNGVPLDGRAMNI 620
+ NGV L+ R + +
Sbjct: 162 IWHMNGVRLNNRQVYV 177
>AL160112-1|CAB77059.1| 392|Homo sapiens hypothetical protein
protein.
Length = 392
Score = 52.0 bits (119), Expect = 2e-06
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 251 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 304
Query: 582 YNGVPLDGRAMNIQL 626
YN LDG+ M L
Sbjct: 305 YNNRCLDGQPMKCNL 319
>AL160111-1|CAB77058.1| 421|Homo sapiens hypothetical protein
protein.
Length = 421
Score = 52.0 bits (119), Expect = 2e-06
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 280 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 333
Query: 582 YNGVPLDGRAMNIQL 626
YN LDG+ M L
Sbjct: 334 YNNRCLDGQPMKCNL 348
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 52.0 bits (119), Expect = 2e-06
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + V N+ + D +KELF E+G +S V D SG+S G V +E A KA+
Sbjct: 184 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 243
Query: 582 YNGVPLDGRAMNIQLATSEINTL 650
+G +DG+ + + A +I L
Sbjct: 244 LHGKSIDGKVLYVGRAQKKIERL 266
Score = 40.3 bits (90), Expect = 0.006
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
+ + NLD ++D +KE FS FG + A V + G+ G V F +A KA+ + N
Sbjct: 289 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMN 347
Query: 588 GVPLDGRAMNIQL 626
G + + +++ L
Sbjct: 348 GRIVGSKPLHVTL 360
Score = 39.5 bits (88), Expect = 0.010
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = +3
Query: 393 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 572
+G + + NLD + + + LFS FG + S V D +G S G A V F+ A A +A
Sbjct: 88 SGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRA 146
Query: 573 MKQYNGVPLDGRAMNI 620
+ NGV L+ R + +
Sbjct: 147 IWHMNGVRLNNRQVYV 162
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 52.0 bits (119), Expect = 2e-06
Identities = 28/83 (33%), Positives = 43/83 (51%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + V N+ + D +KELF E+G +S V D SG+S G V +E A KA+
Sbjct: 199 TNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLD 258
Query: 582 YNGVPLDGRAMNIQLATSEINTL 650
+G +DG+ + + A +I L
Sbjct: 259 LHGKSIDGKVLYVGRAQKKIERL 281
Score = 40.3 bits (90), Expect = 0.006
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
+ + NLD ++D +KE FS FG + A V + G+ G V F +A KA+ + N
Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMN 362
Query: 588 GVPLDGRAMNIQL 626
G + + +++ L
Sbjct: 363 GRIVGSKPLHVTL 375
Score = 39.5 bits (88), Expect = 0.010
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = +3
Query: 393 TGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKA 572
+G + + NLD + + + LFS FG + S V D +G S G A V F+ A A +A
Sbjct: 103 SGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRA 161
Query: 573 MKQYNGVPLDGRAMNI 620
+ NGV L+ R + +
Sbjct: 162 IWHMNGVRLNNRQVYV 177
>AB055760-1|BAB33368.2| 424|Homo sapiens KIAA1649 protein protein.
Length = 424
Score = 52.0 bits (119), Expect = 2e-06
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
TK+ V+NL V++ DI ELF G LK A + + G A+VVF +K DA+ A K+
Sbjct: 283 TKMTVNNLHPRVTEEDIVELFCVCGALKRARLVHP------GVAEVVFVKKDDAITAYKK 336
Query: 582 YNGVPLDGRAMNIQL 626
YN LDG+ M L
Sbjct: 337 YNNRCLDGQPMKCNL 351
>BC030018-1|AAH30018.1| 496|Homo sapiens RNA binding motif protein,
Y-linked, family 1, member F protein.
Length = 496
Score = 50.8 bits (116), Expect = 4e-06
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P KL + L+ ++ +K +F + G + + DR+ +S G A + FE ADA A K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 579 QYNGVPLDGRAMNIQLA 629
NG L G+A+ ++ A
Sbjct: 67 DMNGTSLHGKAIKVEQA 83
>X76059-1|CAA53659.1| 496|Homo sapiens protein ( H.sapiens mRNA for
YRRM1. ).
Length = 496
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P KL + L+ ++ +K +F + G + + DR+ +S G A + FE ADA A K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 579 QYNGVPLDGRAMNIQLA 629
NG L G+A+ ++ A
Sbjct: 67 DMNGKSLHGKAIKVEQA 83
>U36608-1|AAC16917.1| 220|Homo sapiens Y-chromosome RNA recognition
motif protein protein.
Length = 220
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P KL + L+ ++ +K +F + G + + DR+ +S G A + FE ADA A K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 579 QYNGVPLDGRAMNIQLA 629
NG L G+A+ ++ A
Sbjct: 67 DMNGKSLHGKAIKVEQA 83
>BC070298-1|AAH70298.1| 459|Homo sapiens RBMY1A1 protein protein.
Length = 459
Score = 50.0 bits (114), Expect = 7e-06
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P KL + L+ ++ +K +F + G + + DR+ +S G A + FE ADA A K
Sbjct: 7 PGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAK 66
Query: 579 QYNGVPLDGRAMNIQLA 629
NG L G+A+ ++ A
Sbjct: 67 DMNGKSLHGKAIKVEQA 83
>Z23064-1|CAA80599.1| 391|Homo sapiens hnRNP G protein protein.
Length = 391
Score = 49.2 bits (112), Expect = 1e-05
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 575
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 576 KQYNGVPLDGRAMNIQLAT 632
+ NG LDG+A+ ++ AT
Sbjct: 67 RDMNGKSLDGKAIKVEQAT 85
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 49.2 bits (112), Expect = 1e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 585 NGVPLDGRAMNIQLATSEIN 644
NG GRA+ + A SE N
Sbjct: 78 NGREFSGRALRVDNAASEKN 97
>BC014533-1|AAH14533.3| 211|Homo sapiens MYEF2 protein protein.
Length = 211
Score = 49.2 bits (112), Expect = 1e-05
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Frame = +3
Query: 216 GGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGT--- 386
GGG G ++ +GG+ G +R ++ S + + + + + D G SG
Sbjct: 71 GGGMGSMNSVTGGMGMGLDR--MSSSFDRMGPGIGAILERSIDMDRGFLSGPMGSGMRER 128
Query: 387 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 566
I + ++ V NL F ++ +KE FS+ G + A + + +G+S G V F+ A
Sbjct: 129 IGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME-NGKSKGCGTVRFDSPESAE 187
Query: 567 KAMKQYNGVPLDGRAMNIQL 626
KA + NG+ + GR ++++L
Sbjct: 188 KACRIMNGIKISGREIDVRL 207
>BC007435-1|AAH07435.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 49.2 bits (112), Expect = 1e-05
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 575
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 576 KQYNGVPLDGRAMNIQLAT 632
+ NG LDG+A+ ++ AT
Sbjct: 67 RDMNGKSLDGKAIKVEQAT 85
>BC006550-1|AAH06550.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 49.2 bits (112), Expect = 1e-05
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 575
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 576 KQYNGVPLDGRAMNIQLAT 632
+ NG LDG+A+ ++ AT
Sbjct: 67 RDMNGKSLDGKAIKVEQAT 85
>AY464692-1|AAR28036.1| 391|Homo sapiens heterogeneous nuclear
ribonucleoprotein G protein.
Length = 391
Score = 49.2 bits (112), Expect = 1e-05
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 575
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 576 KQYNGVPLDGRAMNIQLAT 632
+ NG LDG+A+ ++ AT
Sbjct: 67 RDMNGKSLDGKAIKVEQAT 85
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 49.2 bits (112), Expect = 1e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 585 NGVPLDGRAMNIQLATSEIN 644
NG GRA+ + A SE N
Sbjct: 78 NGREFSGRALRVDNAASEKN 97
>AL683813-6|CAI39448.1| 391|Homo sapiens RNA binding motif protein,
X-linked protein.
Length = 391
Score = 49.2 bits (112), Expect = 1e-05
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 575
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 576 KQYNGVPLDGRAMNIQLAT 632
+ NG LDG+A+ ++ AT
Sbjct: 67 RDMNGKSLDGKAIKVEQAT 85
>AK002075-1|BAA92070.1| 188|Homo sapiens protein ( Homo sapiens
cDNA FLJ11213 fis, clone PLACE1007969, weakly similar to
HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN M. ).
Length = 188
Score = 49.2 bits (112), Expect = 1e-05
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Frame = +3
Query: 216 GGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGT--- 386
GGG G ++ +GG+ G +R ++ S + + + + + D G SG
Sbjct: 48 GGGMGSMNSVTGGMGMGLDR--MSSSFDRMGPGIGAILERSIDMDRGFLSGPMGSGMRER 105
Query: 387 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAV 566
I + ++ V NL F ++ +KE FS+ G + A + + +G+S G V F+ A
Sbjct: 106 IGSKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKME-NGKSKGCGTVRFDSPESAE 164
Query: 567 KAMKQYNGVPLDGRAMNIQL 626
KA + NG+ + GR ++++L
Sbjct: 165 KACRIMNGIKISGREIDVRL 184
>AF266723-1|AAK58567.1| 391|Homo sapiens RBMX protein.
Length = 391
Score = 49.2 bits (112), Expect = 1e-05
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 575
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 576 KQYNGVPLDGRAMNIQLAT 632
+ NG LDG+A+ ++ AT
Sbjct: 67 RDMNGKSLDGKAIKVEQAT 85
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 585 NGVPLDGRAMNIQLATSEIN 644
NG GRA+ + A SE N
Sbjct: 78 NGREFSGRALRVDNAASEKN 97
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 585 NGVPLDGRAMNIQLATSEIN 644
NG GRA+ + A SE N
Sbjct: 78 NGREFSGRALRVDNAASEKN 97
>X76060-1|CAA53660.1| 419|Homo sapiens YRRM2 protein.
Length = 419
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
KL + L+ ++ +K +F + G + + DR+ +S G A + FE ADA A K
Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDM 68
Query: 585 NGVPLDGRAMNIQLA 629
NG L G+A+ ++ A
Sbjct: 69 NGTSLHGKAIKVEQA 83
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 585 NGVPLDGRAMNIQLATSEIN 644
NG GRA+ + A SE N
Sbjct: 78 NGREFSGRALRVDNAASEKN 97
>DQ120650-1|ABB92435.1| 384|Homo sapiens RBM1 protein.
Length = 384
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 575
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 576 KQYNGVPLDGRAMNIQLAT 632
+ NG LDG+A+ ++ AT
Sbjct: 67 RDMNGKSLDGKAIKVEQAT 85
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 585 NGVPLDGRAMNIQLATSEIN 644
NG GRA+ + A SE N
Sbjct: 78 NGREFSGRALRVDNAASEKN 97
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 76
Query: 585 NGVPLDGRAMNIQLATSEIN 644
NG GRA+ + A SE N
Sbjct: 77 NGREFSGRALRVDNAASEKN 96
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 48.8 bits (111), Expect = 2e-05
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
+ V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 585 NGVPLDGRAMNIQLATSEIN 644
NG GRA+ + A SE N
Sbjct: 78 NGREFSGRALRVDNAASEKN 97
>BC012942-1|AAH12942.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 575
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 576 KQYNGVPLDGRAMNIQLAT 632
+ NG LDG+A+ ++ AT
Sbjct: 67 RDMNGKSLDGKAIKVEQAT 85
>AL139416-3|CAI21694.1| 159|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 159
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 575
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 576 KQYNGVPLDGRAMNIQLAT 632
+ NG LDG+A+ ++ AT
Sbjct: 67 RDMNGKSLDGKAIKVEQAT 85
>AL139416-2|CAI21693.1| 390|Homo sapiens RNA binding motif protein,
X-linked-like 1 protein.
Length = 390
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 575
P KL + L+ ++ ++ +F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAA 66
Query: 576 KQYNGVPLDGRAMNIQLAT 632
+ NG LDG+A+ ++ AT
Sbjct: 67 RDMNGKSLDGKAIKVEQAT 85
>AL109839-2|CAI95632.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + V NL V + +++LFS+FG + S V D SG S V FE+ +A KA+
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 582 YNGVPLDGRAM 614
NG + GR +
Sbjct: 251 MNGKEVSGRLL 261
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A + F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N L G+ + I
Sbjct: 73 NFEMLKGQPIRI 84
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + V NL V + +++LFS+FG + S V D SG S V FE+ +A KA+
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 582 YNGVPLDGRAM 614
NG + GR +
Sbjct: 251 MNGKEVSGRLL 261
Score = 43.2 bits (97), Expect = 8e-04
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
L V NLD + D +++ FS +G++ SA V G S G V F +A KA+ + N
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKV-MTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 588 GVPLDGRAMNIQLA 629
G + + + + LA
Sbjct: 355 GRIVGTKPLYVALA 368
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A + F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N L G+ + I
Sbjct: 73 NFEMLKGQPIRI 84
>AL008725-5|CAI95663.1| 330|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 330
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + V NL V + +++LFS+FG + S V D SG S V FE+ +A KA+
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 582 YNGVPLDGRAM 614
NG + GR +
Sbjct: 251 MNGKEVSGRLL 261
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A + F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N L G+ + I
Sbjct: 73 NFEMLKGQPIRI 84
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 48.8 bits (111), Expect = 2e-05
Identities = 26/71 (36%), Positives = 38/71 (53%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + V NL V + +++LFS+FG + S V D SG S V FE+ +A KA+
Sbjct: 191 TNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVH 250
Query: 582 YNGVPLDGRAM 614
NG + GR +
Sbjct: 251 MNGKEVSGRLL 261
Score = 43.2 bits (97), Expect = 8e-04
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
L V NLD + D +++ FS +G++ SA V G S G V F +A KA+ + N
Sbjct: 296 LYVKNLDDSIDDDKLRKEFSPYGVITSAKV-MTEGGHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 588 GVPLDGRAMNIQLA 629
G + + + + LA
Sbjct: 355 GRIVGTKPLYVALA 368
Score = 33.9 bits (74), Expect = 0.51
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A + F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N L G+ + I
Sbjct: 73 NFEMLKGQPIRI 84
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 48.4 bits (110), Expect = 2e-05
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 414 VSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNG 590
V N+ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+ NG
Sbjct: 11 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 70
Query: 591 VPLDGRAMNIQLATSEIN 644
GRA+ + A SE N
Sbjct: 71 REFSGRALRVDNAASEKN 88
>AF279289-1|AAF82129.1| 386|Homo sapiens testes-specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 386
Score = 47.6 bits (108), Expect = 4e-05
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 575
P KL + L+ + ++ F ++G + + DR + +S G A V FE ADA A+
Sbjct: 1 PGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAV 60
Query: 576 KQYNGVPLDGRAMNIQLAT 632
+ NG LDG+A+ + AT
Sbjct: 61 RDMNGKSLDGKAIKVAQAT 79
>AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
variant protein.
Length = 616
Score = 47.2 bits (107), Expect = 5e-05
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
+ V ++ + ++ +K++FSE G + S + YDR +G+ G ++ + A+ AM+
Sbjct: 18 VFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77
Query: 585 NGVPLDGRAMNIQLATSEIN 644
NG GRA+ + A SE N
Sbjct: 78 NGREFSGRALRVDNAASEKN 97
>BC026077-1|AAH26077.1| 161|Homo sapiens RBMY2FP protein protein.
Length = 161
Score = 46.8 bits (106), Expect = 7e-05
Identities = 25/77 (32%), Positives = 40/77 (51%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMK 578
P K + L+ ++ K +F++ G + + DR+ +S G A FE ADA A K
Sbjct: 7 PGKHFIGGLNRENNEKMFKAVFAKHGPISEVLLIKDRTSKSRGFAFTTFENTADAKNAAK 66
Query: 579 QYNGVPLDGRAMNIQLA 629
G PLDG+A+ ++ A
Sbjct: 67 HMIGKPLDGKAIKVEQA 83
>AF069682-1|AAC24858.2| 392|Homo sapiens testes specific
heterogenous nuclear ribonucleoprotein G-T protein.
Length = 392
Score = 46.8 bits (106), Expect = 7e-05
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 575
P KL + L+ + ++ F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAA 66
Query: 576 KQYNGVPLDGRAMNIQLAT 632
+ NG LDG+A+ + AT
Sbjct: 67 RDMNGKSLDGKAIKVAQAT 85
>U36561-1|AAA79948.1| 528|Homo sapiens fus-like protein protein.
Length = 528
Score = 46.4 bits (105), Expect = 9e-05
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGR----GGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKH 335
GGG G++ + GR GGG+G NRS G R RGG RG + +
Sbjct: 208 GGGYGQQDRGGRGRGRSSGGGGGSGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DR 262
Query: 336 DMFNDFG---ERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS------ 488
FN FG ++ + +S + + V L V+ + + F + GI+K+
Sbjct: 263 GGFNKFGGPRDQGSRHDSEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQ 322
Query: 489 --ASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLAT 632
+++ DR +G+ G A V F+ A A+ ++G G + + AT
Sbjct: 323 PMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFAT 373
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 392 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 446
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 46.4 bits (105), Expect = 9e-05
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR----SLGTADVVFERKADAVKAM 575
L + NL+F ++ +KE+FS+ G +KS S+ ++ S+G V + + A KA+
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 791
Query: 576 KQYNGVPLDGRAMNIQLA 629
KQ G +DG + ++++
Sbjct: 792 KQLQGHVVDGHKLEVRIS 809
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 46.4 bits (105), Expect = 9e-05
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR----SLGTADVVFERKADAVKAM 575
L + NL+F ++ +KE+FS+ G +KS S+ ++ S+G V + + A KA+
Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 791
Query: 576 KQYNGVPLDGRAMNIQLA 629
KQ G +DG + ++++
Sbjct: 792 KQLQGHVVDGHKLEVRIS 809
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 46.4 bits (105), Expect = 9e-05
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR----SLGTADVVFERKADAVKAM 575
L + NL+F ++ +KE+FS+ G +KS S+ ++ S+G V + + A KA+
Sbjct: 745 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 804
Query: 576 KQYNGVPLDGRAMNIQLA 629
KQ G +DG + ++++
Sbjct: 805 KQLQGHVVDGHKLEVRIS 822
>BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif protein
28 protein.
Length = 759
Score = 46.0 bits (104), Expect = 1e-04
Identities = 22/78 (28%), Positives = 42/78 (53%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
+L++ NL F S+ D+K +F++FG + ++ G+ G V F+ +A KA+K
Sbjct: 115 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGM 174
Query: 585 NGVPLDGRAMNIQLATSE 638
N + GR + + A ++
Sbjct: 175 NMKEIKGRTVAVDWAVAK 192
>AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif protein
28 variant protein.
Length = 759
Score = 46.0 bits (104), Expect = 1e-04
Identities = 22/78 (28%), Positives = 42/78 (53%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
+L++ NL F S+ D+K +F++FG + ++ G+ G V F+ +A KA+K
Sbjct: 115 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGM 174
Query: 585 NGVPLDGRAMNIQLATSE 638
N + GR + + A ++
Sbjct: 175 NMKEIKGRTVAVDWAVAK 192
>AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens
cDNA FLJ10377 fis, clone NT2RM2001989, weakly similar to
NUCLEOLAR PROTEIN NOP4. ).
Length = 759
Score = 46.0 bits (104), Expect = 1e-04
Identities = 22/78 (28%), Positives = 42/78 (53%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
+L++ NL F S+ D+K +F++FG + ++ G+ G V F+ +A KA+K
Sbjct: 115 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPDGKMRGFGFVQFKNLLEAGKALKGM 174
Query: 585 NGVPLDGRAMNIQLATSE 638
N + GR + + A ++
Sbjct: 175 NMKEIKGRTVAVDWAVAK 192
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = +3
Query: 402 TKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQ 581
T + + N + D +K+LF G S V D SG+S G V FER DA KA+ +
Sbjct: 191 TNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 247
Query: 582 YNGVPLDGRAMNIQLATSEI 641
NG L+G+ + + A ++
Sbjct: 248 MNGKELNGKQIYVGRAQKKV 267
Score = 33.5 bits (73), Expect = 0.68
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L V +L V+++ + E FS G + S V D + RSLG A V F++ ADA +A+
Sbjct: 13 LYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTM 72
Query: 585 NGVPLDGRAMNI 620
N + G+ + I
Sbjct: 73 NFDVIKGKPVRI 84
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/71 (30%), Positives = 42/71 (59%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
LL NL + V+ ++KE+F + ++ S + G+S G A + F+ +ADA K ++
Sbjct: 395 LLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGKSKGIAYIEFKTEADAEKTFEEKQ 450
Query: 588 GVPLDGRAMNI 620
G +DGR++++
Sbjct: 451 GTEIDGRSISL 461
Score = 41.1 bits (92), Expect = 0.003
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 393 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 482 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 538
Query: 570 AMKQYNGVPLDGRAMNIQL 626
A+ N ++GRA+ ++L
Sbjct: 539 ALNSCNKREIEGRAIRLEL 557
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/71 (30%), Positives = 42/71 (59%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
LL NL + V+ ++KE+F + ++ S + G+S G A + F+ +ADA K ++
Sbjct: 372 LLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGKSKGIAYIEFKTEADAEKTFEEKQ 427
Query: 588 GVPLDGRAMNI 620
G +DGR++++
Sbjct: 428 GTEIDGRSISL 438
Score = 39.9 bits (89), Expect = 0.008
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 393 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 459 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 515
Query: 570 AMKQYNGVPLDGRAMNIQL 626
A+ N + GRA+ ++L
Sbjct: 516 ALNSCNKREIGGRAIRLEL 534
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/71 (30%), Positives = 42/71 (59%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
LL NL + V+ ++KE+F + ++ S + G+S G A + F+ +ADA K ++
Sbjct: 395 LLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGKSKGIAYIEFKTEADAEKTFEEKQ 450
Query: 588 GVPLDGRAMNI 620
G +DGR++++
Sbjct: 451 GTEIDGRSISL 461
Score = 41.1 bits (92), Expect = 0.003
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 393 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 482 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 538
Query: 570 AMKQYNGVPLDGRAMNIQL 626
A+ N ++GRA+ ++L
Sbjct: 539 ALNSCNKREIEGRAIRLEL 557
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 165 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 339 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 515
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 516 RSLGTADVVFERKADAVKAMKQ 581
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 165 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 339 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 515
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 516 RSLGTADVVFERKADAVKAMKQ 581
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>BC057796-1|AAH57796.1| 392|Homo sapiens RNA binding motif protein,
X-linked-like 2 protein.
Length = 392
Score = 45.2 bits (102), Expect = 2e-04
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 399 PTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAM 575
P KL + + + ++ F ++G + + DR + +S G A V FE ADA A
Sbjct: 7 PGKLFIGGFNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAA 66
Query: 576 KQYNGVPLDGRAMNIQLAT 632
+ NG LDG+A+ + AT
Sbjct: 67 RDMNGKSLDGKAIKVAQAT 85
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 165 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 339 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 515
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 516 RSLGTADVVFERKADAVKAMKQ 581
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 165 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 339 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 515
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 516 RSLGTADVVFERKADAVKAMKQ 581
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 165 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 339 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 515
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 516 RSLGTADVVFERKADAVKAMKQ 581
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 165 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 11 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 69
Query: 339 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 515
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 70 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 127
Query: 516 RSLGTADVVFERKADAVKAMKQ 581
RS G V+F+ K M Q
Sbjct: 128 RSRGFGFVLFKESESVDKVMDQ 149
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 165 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 339 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 515
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 516 RSLGTADVVFERKADAVKAMKQ 581
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 165 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 339 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 515
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 516 RSLGTADVVFERKADAVKAMKQ 581
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 3/142 (2%)
Frame = +3
Query: 165 IGGGAGRKFDANKRTGRGGGA--GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
+GG AG + A +G A G + GG G GG +S ++ D + + +
Sbjct: 19 VGGSAGEQEGAMVAATQGAAAAAGSGAGTGGGTASGGTEGGSAESEG-AKIDASKNEEDE 77
Query: 339 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 515
++ R + + T K+ + L + + D+K+ FS+FG + ++ D +G
Sbjct: 78 GHSNSSPRHSE--AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITG 135
Query: 516 RSLGTADVVFERKADAVKAMKQ 581
RS G V+F+ K M Q
Sbjct: 136 RSRGFGFVLFKESESVDKVMDQ 157
>D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein.
Length = 350
Score = 44.8 bits (101), Expect = 3e-04
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +3
Query: 357 ERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTA 533
+R L +G T L+V+ L ++ + K LF G ++S + D+ +G+SLG
Sbjct: 15 QRPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYG 74
Query: 534 DVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
V + DA KA+ NG+ L + + + A ++R
Sbjct: 75 FVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIR 114
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 44.8 bits (101), Expect = 3e-04
Identities = 22/71 (30%), Positives = 41/71 (57%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
LL NL + V+ ++KE+F + ++ S + G S G A + F+ +ADA K ++
Sbjct: 288 LLAKNLPYKVTQDELKEVFEDAAEIRLVS----KDGNSKGIAYIEFKTEADAEKTFEEKQ 343
Query: 588 GVPLDGRAMNI 620
G +DGR++++
Sbjct: 344 GTEIDGRSISL 354
Score = 41.1 bits (92), Expect = 0.003
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 393 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 375 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 431
Query: 570 AMKQYNGVPLDGRAMNIQL 626
A+ N ++GRA+ ++L
Sbjct: 432 ALNSCNKREIEGRAIRLEL 450
>X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein.
Length = 589
Score = 44.4 bits (100), Expect = 4e-04
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 389
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTADVV 542
+ + V L GVS + E F + GI+K+ +++ D+ +G+ G A V
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVS 286
Query: 543 FERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
F+ A A+ ++G G + + AT +R
Sbjct: 287 FDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMR 323
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding protein
RBP56 protein.
Length = 592
Score = 44.4 bits (100), Expect = 4e-04
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 389
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTADVV 542
+ + V L GVS + E F + GI+K+ +++ D+ +G+ G A V
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVS 289
Query: 543 FERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
F+ A A+ ++G G + + AT +R
Sbjct: 290 FDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMR 326
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>BX537536-1|CAD97776.1| 492|Homo sapiens hypothetical protein
protein.
Length = 492
Score = 44.4 bits (100), Expect = 4e-04
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V L+ +D D++ +FS FG ++S V D ++G SL A + FE++ D KA +
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 585 NGVPLDGRAMNIQLATS 635
+ V +D R +++ + S
Sbjct: 302 DNVLIDDRRIHVDFSQS 318
>BC107684-1|AAI07685.1| 387|Homo sapiens PPIL4 protein protein.
Length = 387
Score = 44.4 bits (100), Expect = 4e-04
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V L+ +D D++ +FS FG ++S V D ++G SL A + FE++ D KA +
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 585 NGVPLDGRAMNIQLATS 635
+ V +D R +++ + S
Sbjct: 302 DNVLIDDRRIHVDFSQS 318
>BC064134-1|AAH64134.1| 434|Homo sapiens PPIL4 protein protein.
Length = 434
Score = 44.4 bits (100), Expect = 4e-04
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V L+ +D D++ +FS FG ++S V D ++G SL A + FE++ D KA +
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 585 NGVPLDGRAMNIQLATS 635
+ V +D R +++ + S
Sbjct: 302 DNVLIDDRRIHVDFSQS 318
>BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 592
Score = 44.4 bits (100), Expect = 4e-04
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 389
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTADVV 542
+ + V L GVS + E F + GI+K+ +++ D+ +G+ G A V
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVS 289
Query: 543 FERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
F+ A A+ ++G G + + AT +R
Sbjct: 290 FDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMR 326
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>BC020986-1|AAH20986.1| 492|Homo sapiens peptidylprolyl isomerase
(cyclophilin)-like 4 protein.
Length = 492
Score = 44.4 bits (100), Expect = 4e-04
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V L+ +D D++ +FS FG ++S V D ++G SL A + FE++ D KA +
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 585 NGVPLDGRAMNIQLATS 635
+ V +D R +++ + S
Sbjct: 302 DNVLIDDRRIHVDFSQS 318
>AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 589
Score = 44.4 bits (100), Expect = 4e-04
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 389
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTADVV 542
+ + V L GVS + E F + GI+K+ +++ D+ +G+ G A V
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVS 286
Query: 543 FERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
F+ A A+ ++G G + + AT +R
Sbjct: 287 FDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMR 323
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>AL357619-2|CAI16471.1| 492|Homo sapiens peptidylprolyl isomerase
(cyclophilin)-like 4 protein.
Length = 492
Score = 44.4 bits (100), Expect = 4e-04
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V L+ +D D++ +FS FG ++S V D ++G SL A + FE++ D KA +
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 585 NGVPLDGRAMNIQLATS 635
+ V +D R +++ + S
Sbjct: 302 DNVLIDDRRIHVDFSQS 318
>AL078581-5|CAI19508.1| 492|Homo sapiens peptidylprolyl isomerase
(cyclophilin)-like 4 protein.
Length = 492
Score = 44.4 bits (100), Expect = 4e-04
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V L+ +D D++ +FS FG ++S V D ++G SL A + FE++ D KA +
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKM 301
Query: 585 NGVPLDGRAMNIQLATS 635
+ V +D R +++ + S
Sbjct: 302 DNVLIDDRRIHVDFSQS 318
>AF026564-1|AAC16916.1| 318|Homo sapiens RNA binding protein
protein.
Length = 318
Score = 44.4 bits (100), Expect = 4e-04
Identities = 22/75 (29%), Positives = 40/75 (53%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
KL + L+ ++ +KE+F++ G L + R+ +S ++FE ADA A +
Sbjct: 9 KLFIGGLNREANEKVLKEVFAKHGPLLEVLLIKGRTSKSRDFVVIIFENAADAKNAARDM 68
Query: 585 NGVPLDGRAMNIQLA 629
NG LDG+ + ++ A
Sbjct: 69 NGKSLDGKEIKVEQA 83
>AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein.
Length = 589
Score = 44.4 bits (100), Expect = 4e-04
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 389
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 173 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 226
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTADVV 542
+ + V L GVS + E F + GI+K+ +++ D+ +G+ G A V
Sbjct: 227 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVS 286
Query: 543 FERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
F+ A A+ ++G G + + AT +R
Sbjct: 287 FDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMR 323
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 517 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 554
>AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein.
Length = 592
Score = 44.4 bits (100), Expect = 4e-04
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTI 389
G GG G R G + GR G +T S+ RG + H D+G R +S +
Sbjct: 176 GYGGSQGGGRGRGGYDKDGR--GPMTGSSGGDRGGFKNFGGH---RDYGPRT-DADSESD 229
Query: 390 TTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTADVV 542
+ + V L GVS + E F + GI+K+ +++ D+ +G+ G A V
Sbjct: 230 NSDNNTIFVQGLGEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVS 289
Query: 543 FERKADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
F+ A A+ ++G G + + AT +R
Sbjct: 290 FDDPPSAKAAIDWFDGKEFHGNIIKVSFATRRPEFMR 326
Score = 31.1 bits (67), Expect = 3.6
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGG 281
GG G + RGGG+G+ +RSGG R+ GG
Sbjct: 520 GGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGG 557
>U38175-1|AAB41913.1| 326|Homo sapiens HuR RNA binding protein
protein.
Length = 326
Score = 44.0 bits (99), Expect = 5e-04
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +3
Query: 339 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 515
M N + + + G I G T L+V+ L ++ +++ LFS G ++SA + D+ +G
Sbjct: 1 MSNGYEDHMAEDCRGDI--GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Query: 516 RSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
SLG V + DA +A+ NG+ L + + + A
Sbjct: 59 HSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA 96
Score = 40.3 bits (90), Expect = 0.006
Identities = 19/62 (30%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L +S L ++ D++++FS FG + ++ V D+ +G S G A + F+++++A +A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 585 NG 590
NG
Sbjct: 168 NG 169
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 44.0 bits (99), Expect = 5e-04
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFER 551
+SG T L+V+ L ++ ++K LF G ++S + D+ +G+SLG V +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 552 KADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
DA KA+ NG+ L + + + A ++R
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR 123
>U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protein 1
protein.
Length = 359
Score = 44.0 bits (99), Expect = 5e-04
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFER 551
+SG T L+V+ L ++ ++K LF G ++S + D+ +G+SLG V +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 552 KADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
DA KA+ NG+ L + + + A ++R
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR 123
>BT009793-1|AAP88795.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 44.0 bits (99), Expect = 5e-04
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +3
Query: 339 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 515
M N + + + G I G T L+V+ L ++ +++ LFS G ++SA + D+ +G
Sbjct: 1 MSNGYEDHMAEDCRGDI--GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Query: 516 RSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
SLG V + DA +A+ NG+ L + + + A
Sbjct: 59 HSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA 96
Score = 40.3 bits (90), Expect = 0.006
Identities = 19/62 (30%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L +S L ++ D++++FS FG + ++ V D+ +G S G A + F+++++A +A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 585 NG 590
NG
Sbjct: 168 NG 169
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 44.0 bits (99), Expect = 5e-04
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFER 551
+SG T L+V+ L ++ ++K LF G ++S + D+ +G+SLG V +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 552 KADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
DA KA+ NG+ L + + + A ++R
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR 123
>BC003376-1|AAH03376.1| 326|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 1 (Hu antigen R)
protein.
Length = 326
Score = 44.0 bits (99), Expect = 5e-04
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +3
Query: 339 MFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SG 515
M N + + + G I G T L+V+ L ++ +++ LFS G ++SA + D+ +G
Sbjct: 1 MSNGYEDHMAEDCRGDI--GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Query: 516 RSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
SLG V + DA +A+ NG+ L + + + A
Sbjct: 59 HSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYA 96
Score = 40.3 bits (90), Expect = 0.006
Identities = 19/62 (30%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQY 584
L +S L ++ D++++FS FG + ++ V D+ +G S G A + F+++++A +A+ +
Sbjct: 108 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 167
Query: 585 NG 590
NG
Sbjct: 168 NG 169
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 44.0 bits (99), Expect = 5e-04
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFER 551
+SG T L+V+ L ++ ++K LF G ++S + D+ +G+SLG V +
Sbjct: 58 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 117
Query: 552 KADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
DA KA+ NG+ L + + + A ++R
Sbjct: 118 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR 151
>AL161628-3|CAI13377.1| 189|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 189
Score = 44.0 bits (99), Expect = 5e-04
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFER 551
+SG T L+V+ L ++ ++K LF G ++S + D+ +G+SLG V +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 552 KADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
DA KA+ NG+ L + + + A ++R
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR 123
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 44.0 bits (99), Expect = 5e-04
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFER 551
+SG T L+V+ L ++ ++K LF G ++S + D+ +G+SLG V +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 552 KADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
DA KA+ NG+ L + + + A ++R
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR 123
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 44.0 bits (99), Expect = 5e-04
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFER 551
+SG T L+V+ L ++ ++K LF G ++S + D+ +G+SLG V +
Sbjct: 30 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 89
Query: 552 KADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
DA KA+ NG+ L + + + A ++R
Sbjct: 90 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR 123
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 44.0 bits (99), Expect = 5e-04
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +3
Query: 375 NSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFER 551
+SG T L+V+ L ++ ++K LF G ++S + D+ +G+SLG V +
Sbjct: 38 DSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYID 97
Query: 552 KADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
DA KA+ NG+ L + + + A ++R
Sbjct: 98 PKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR 131
>BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type and
RNA binding motif 1 protein.
Length = 217
Score = 43.6 bits (98), Expect = 6e-04
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 378 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVFERK 554
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R S G A ++F K
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLA 629
A + N L GR + +A
Sbjct: 62 DSAQNCTRAINNKQLFGRVIKASIA 86
>BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein.
Length = 140
Score = 43.6 bits (98), Expect = 6e-04
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 378 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVFERK 554
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R S G A ++F K
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLA 629
A + N L GR + +A
Sbjct: 62 DSAQNCTRAINNKQLFGRVIKASIA 86
>BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for
IMAGE:3609027) protein.
Length = 141
Score = 43.6 bits (98), Expect = 6e-04
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 378 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVFERK 554
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R S G A ++F K
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLA 629
A + N L GR + +A
Sbjct: 62 DSAQNCTRAINNKQLFGRVIKASIA 86
>AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein.
Length = 217
Score = 43.6 bits (98), Expect = 6e-04
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +3
Query: 378 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGR-SLGTADVVFERK 554
SG + + + VSNL F ++++D+ +FS++G + ++ D+ R S G A ++F K
Sbjct: 2 SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLA 629
A + N L GR + +A
Sbjct: 62 DSAQNCTRAINNKQLFGRVIKASIA 86
>X71428-1|CAA50559.1| 525|Homo sapiens FUS gycline rich protein
protein.
Length = 525
Score = 42.7 bits (96), Expect = 0.001
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 380
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 222 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 276
Query: 381 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 533
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 277 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 336
Query: 534 DVVFERKADAVKAMKQYNGVPLDGRAMNIQLAT 632
V F+ A A+ ++G G + + AT
Sbjct: 337 TVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFAT 369
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 388 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 442
>S62140-1|AAB27102.1| 526|Homo sapiens TLS protein.
Length = 526
Score = 42.7 bits (96), Expect = 0.001
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 380
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 381 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 533
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 534 DVVFERKADAVKAMKQYNGVPLDGRAMNIQLAT 632
V F+ A A+ ++G G + + AT
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFAT 370
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
>CR456747-1|CAG33028.1| 526|Homo sapiens FUS protein.
Length = 526
Score = 42.7 bits (96), Expect = 0.001
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 380
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 381 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 533
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 534 DVVFERKADAVKAMKQYNGVPLDGRAMNIQLAT 632
V F+ A A+ ++G G + + AT
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFAT 370
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
>BT007131-1|AAP35795.1| 526|Homo sapiens fusion, derived from
t(12;16) malignant liposarcoma protein.
Length = 526
Score = 42.7 bits (96), Expect = 0.001
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 380
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 381 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 533
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 534 DVVFERKADAVKAMKQYNGVPLDGRAMNIQLAT 632
V F+ A A+ ++G G + + AT
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFAT 370
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
>BC026062-1|AAH26062.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 42.7 bits (96), Expect = 0.001
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 380
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 381 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 533
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 534 DVVFERKADAVKAMKQYNGVPLDGRAMNIQLAT 632
V F+ A A+ ++G G + + AT
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFAT 370
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
>BC002459-1|AAH02459.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 42.7 bits (96), Expect = 0.001
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 380
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 381 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 533
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 534 DVVFERKADAVKAMKQYNGVPLDGRAMNIQLAT 632
V F+ A A+ ++G G + + AT
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFAT 370
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
>BC000402-1|AAH00402.1| 526|Homo sapiens fusion (involved in
t(12;16) in malignant liposarcoma) protein.
Length = 526
Score = 42.7 bits (96), Expect = 0.001
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 380
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 381 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 533
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 534 DVVFERKADAVKAMKQYNGVPLDGRAMNIQLAT 632
V F+ A A+ ++G G + + AT
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFAT 370
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
>AF071213-2|AAC35284.1| 525|Homo sapiens FUS/TLS protein protein.
Length = 525
Score = 42.7 bits (96), Expect = 0.001
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 380
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 222 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 276
Query: 381 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 533
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 277 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 336
Query: 534 DVVFERKADAVKAMKQYNGVPLDGRAMNIQLAT 632
V F+ A A+ ++G G + + AT
Sbjct: 337 TVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFAT 369
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 388 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 442
>AF071213-1|AAC35285.1| 526|Homo sapiens FUS/TLS protein protein.
Length = 526
Score = 42.7 bits (96), Expect = 0.001
Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Frame = +3
Query: 210 GRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFG---ERKLQRNS 380
G GGG G NRS G R RGG RG + + FN FG ++ + +S
Sbjct: 223 GGGGGGGGGYNRSSGGYEPRGRGG----GRGGRGGMGGS-DRGGFNKFGGPRDQGSRHDS 277
Query: 381 GTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKS--------ASVHYDR-SGRSLGTA 533
+ + V L V+ + + F + GI+K+ +++ DR +G+ G A
Sbjct: 278 EQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEA 337
Query: 534 DVVFERKADAVKAMKQYNGVPLDGRAMNIQLAT 632
V F+ A A+ ++G G + + AT
Sbjct: 338 TVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFAT 370
Score = 32.3 bits (70), Expect = 1.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +3
Query: 168 GGGAGRKFDANKRTGRGGGAGFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHD 338
GG GR +G GG GF S GG G+ R G K N + ++N +W+++
Sbjct: 389 GGPMGRGGYGGGGSGGGGRGGFPSGGGGG--GGQQRAGDWKCPNPTCENMNFSWRNE 443
>BC130519-1|AAI30520.1| 594|Homo sapiens apobec-1 complementation
factor protein.
Length = 594
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/101 (31%), Positives = 52/101 (51%)
Frame = +3
Query: 327 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
R + A V F + DAV+AMK NG LDG + + LA
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein.
Length = 367
Score = 42.3 bits (95), Expect = 0.001
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +3
Query: 378 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERK 554
+G T L+V+ L ++ + K LF G ++S + D+ +G+SLG V +
Sbjct: 31 NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDP 90
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
DA KA+ NG+ L + + + A ++R
Sbjct: 91 NDADKAINTLNGLKLQTKTIKVSYARPSSASIR 123
>AL589794-7|CAI15763.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/101 (31%), Positives = 52/101 (51%)
Frame = +3
Query: 327 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
R + A V F + DAV+AMK NG LDG + + LA
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>AL589794-6|CAI15764.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/101 (31%), Positives = 52/101 (51%)
Frame = +3
Query: 327 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
R + A V F + DAV+AMK NG LDG + + LA
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>AL589794-5|CAI15762.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/101 (31%), Positives = 52/101 (51%)
Frame = +3
Query: 327 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 215 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 268
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
R + A V F + DAV+AMK NG LDG + + LA
Sbjct: 269 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 309
>AL512366-4|CAI14236.1| 586|Homo sapiens APOBEC1 complementation
factor protein.
Length = 586
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/101 (31%), Positives = 52/101 (51%)
Frame = +3
Query: 327 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
R + A V F + DAV+AMK NG LDG + + LA
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>AL512366-3|CAI14235.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/101 (31%), Positives = 52/101 (51%)
Frame = +3
Query: 327 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
R + A V F + DAV+AMK NG LDG + + LA
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>AL512366-1|CAI14233.1| 594|Homo sapiens APOBEC1 complementation
factor protein.
Length = 594
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/101 (31%), Positives = 52/101 (51%)
Frame = +3
Query: 327 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 215 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 268
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
R + A V F + DAV+AMK NG LDG + + LA
Sbjct: 269 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 309
>AK000324-1|BAA91086.1| 431|Homo sapiens protein ( Homo sapiens
cDNA FLJ20317 fis, clone HEP08678. ).
Length = 431
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/101 (31%), Positives = 52/101 (51%)
Frame = +3
Query: 327 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 52 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 105
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
R + A V F + DAV+AMK NG LDG + + LA
Sbjct: 106 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 146
>AJ272079-1|CAB94755.1| 586|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 586
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/101 (31%), Positives = 52/101 (51%)
Frame = +3
Query: 327 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
R + A V F + DAV+AMK NG LDG + + LA
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>AJ272078-1|CAB94754.1| 594|Homo sapiens APOBEC-1 stimulating
protein protein.
Length = 594
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/101 (31%), Positives = 52/101 (51%)
Frame = +3
Query: 327 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
R + A V F + DAV+AMK NG LDG + + LA
Sbjct: 261 RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTLA 301
>AF271790-1|AAF76222.1| 569|Homo sapiens APOBEC-1 complementation
factor related protein protein.
Length = 569
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/101 (31%), Positives = 52/101 (51%)
Frame = +3
Query: 327 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 190 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 243
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
R + A V F + DAV+AMK NG LDG + + LA
Sbjct: 244 RVKKIRDYAFVHFSNRKDAVEAMKALNGKVLDGSPIEVTLA 284
>AF271789-1|AAF76221.1| 586|Homo sapiens APOBEC-1 complementation
factor protein.
Length = 586
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/101 (31%), Positives = 52/101 (51%)
Frame = +3
Query: 327 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
R + A V F + DAV+AMK NG LDG + + LA
Sbjct: 261 RVKKIRDYAFVHFSNRKDAVEAMKALNGKVLDGSPIEVTLA 301
>AF209192-1|AAF34824.1| 586|Homo sapiens Apobec-1 complementation
factor protein.
Length = 586
Score = 42.3 bits (95), Expect = 0.001
Identities = 32/101 (31%), Positives = 52/101 (51%)
Frame = +3
Query: 327 WKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYD 506
W H + D+ E +++ + T+++ L V NL S+ I++ EF +K +V +
Sbjct: 207 WGHGIAVDWAEPEVEVDEDTMSSVKI-LYVRNLMLSTSEEMIEK---EFNNIKPGAV--E 260
Query: 507 RSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLA 629
R + A V F + DAV+AMK NG LDG + + LA
Sbjct: 261 RVKKIRDYAFVHFSNRKDAVEAMKALNGKVLDGSPIEVTLA 301
>X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric cap
binding complex CBC protein.
Length = 156
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL-GTADVVFERKADAVKAMKQY 584
L V NL F ++ I ELFS+ G +K + D+ ++ G V + +ADA AM+
Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYI 101
Query: 585 NGVPLDGR 608
NG LD R
Sbjct: 102 NGTRLDDR 109
>L37368-1|AAA92859.1| 305|Homo sapiens RNA-binding protein protein.
Length = 305
Score = 41.9 bits (94), Expect = 0.002
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
Frame = +3
Query: 216 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 386
G + S+RSG R+ + S + S R N + +R +
Sbjct: 96 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
Query: 387 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 560
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 156 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 215
Query: 561 AVKAMKQYNGVPLDGR 608
A KA+K +G +DG+
Sbjct: 216 AEKALKHMDGGQIDGQ 231
>L26405-1|AAA58677.1| 359|Homo sapiens huc protein.
Length = 359
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +3
Query: 378 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERK 554
+G T L+V+ L ++ + K LF G ++S + D+ +GR LG V +
Sbjct: 31 NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDP 90
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
DA KA+ NG+ L + + + A ++R
Sbjct: 91 NDADKAINTLNGLKLQTKTIKVSYARPSSASIR 123
>BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL-GTADVVFERKADAVKAMKQY 584
L V NL F ++ I ELFS+ G +K + D+ ++ G V + +ADA AM+
Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYI 101
Query: 585 NGVPLDGR 608
NG LD R
Sbjct: 102 NGTRLDDR 109
>BC108316-1|AAI08317.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 41.9 bits (94), Expect = 0.002
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
Frame = +3
Query: 216 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 386
G + S+RSG R+ + S + S R N + +R +
Sbjct: 96 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
Query: 387 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 560
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 156 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 215
Query: 561 AVKAMKQYNGVPLDGR 608
A KA+K +G +DG+
Sbjct: 216 AEKALKHMDGGQIDGQ 231
>BC001838-1|AAH01838.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 41.9 bits (94), Expect = 0.002
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
Frame = +3
Query: 216 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 386
G + S+RSG R+ + S + S R N + +R +
Sbjct: 96 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
Query: 387 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 560
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 156 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 215
Query: 561 AVKAMKQYNGVPLDGR 608
A KA+K +G +DG+
Sbjct: 216 AEKALKHMDGGQIDGQ 231
>BC001659-1|AAH01659.1| 305|Homo sapiens RNA binding protein S1,
serine-rich domain protein.
Length = 305
Score = 41.9 bits (94), Expect = 0.002
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
Frame = +3
Query: 216 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 386
G + S+RSG R+ + S + S R N + +R +
Sbjct: 96 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
Query: 387 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 560
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 156 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 215
Query: 561 AVKAMKQYNGVPLDGR 608
A KA+K +G +DG+
Sbjct: 216 AEKALKHMDGGQIDGQ 231
>BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding
protein subunit 2, 20kDa protein.
Length = 156
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL-GTADVVFERKADAVKAMKQY 584
L V NL F ++ I ELFS+ G +K + D+ ++ G V + +ADA AM+
Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYI 101
Query: 585 NGVPLDGR 608
NG LD R
Sbjct: 102 NGTRLDDR 109
>AY644767-1|AAV85455.1| 156|Homo sapiens cell
proliferation-inducing gene 55 protein.
Length = 156
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL-GTADVVFERKADAVKAMKQY 584
L V NL F ++ I ELFS+ G +K + D+ ++ G V + +ADA AM+
Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYI 101
Query: 585 NGVPLDGR 608
NG LD R
Sbjct: 102 NGTRLDDR 109
>AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein.
Length = 360
Score = 41.9 bits (94), Expect = 0.002
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +3
Query: 378 SGTITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDR-SGRSLGTADVVFERK 554
+G T L+V+ L ++ + K LF G ++S + D+ +GR LG V +
Sbjct: 31 NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGRDLGYGFVNYPDP 90
Query: 555 ADAVKAMKQYNGVPLDGRAMNIQLATSEINTLR 653
DA KA+ NG+ L + + + A ++R
Sbjct: 91 NDADKAINTLNGLKLQTKTIKVSYARPSSASIR 123
>AF274003-1|AAL56665.1| 282|Homo sapiens splicing-related factor
RNPS1 protein.
Length = 282
Score = 41.9 bits (94), Expect = 0.002
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
Frame = +3
Query: 216 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 386
G + S+RSG R+ + S + S R N + +R +
Sbjct: 73 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 132
Query: 387 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 560
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 133 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 192
Query: 561 AVKAMKQYNGVPLDGR 608
A KA+K +G +DG+
Sbjct: 193 AEKALKHMDGGQIDGQ 208
>AF247662-1|AAF72519.1| 228|Homo sapiens SR-related protein LD2
protein.
Length = 228
Score = 41.9 bits (94), Expect = 0.002
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
Frame = +3
Query: 216 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 386
G + S+RSG R+ + S + S R N + +R +
Sbjct: 19 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 78
Query: 387 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 560
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 79 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 138
Query: 561 AVKAMKQYNGVPLDGR 608
A KA+K +G +DG+
Sbjct: 139 AEKALKHMDGGQIDGQ 154
>AF015608-1|AAC39791.1| 305|Homo sapiens SR protein protein.
Length = 305
Score = 41.9 bits (94), Expect = 0.002
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 5/136 (3%)
Frame = +3
Query: 216 GGGAGFRSNRSGGVQRGRNRGGITKSTNYS---RGDVNSTWKHDMFNDFGERKLQRNSGT 386
G + S+RSG R+ + S + S R N + +R +
Sbjct: 96 GSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRS 155
Query: 387 ITTGPTKLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL--GTADVVFERKAD 560
+ PTK+ + L V+ I E+FS +G +K + +R L G A V FE +
Sbjct: 156 PSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDE 215
Query: 561 AVKAMKQYNGVPLDGR 608
A KA+K +G +DG+
Sbjct: 216 AEKALKHMDGGQIDGQ 231
>M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein.
Length = 380
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 7 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 66
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 67 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 126
Query: 642 NTLR 653
++R
Sbjct: 127 ASIR 130
>BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein.
Length = 366
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 7 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 66
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 67 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 126
Query: 642 NTLR 653
++R
Sbjct: 127 ASIR 130
>AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein.
Length = 380
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 7 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 66
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 67 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 126
Query: 642 NTLR 653
++R
Sbjct: 127 ASIR 130
>AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein.
Length = 366
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 7 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 66
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 67 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 126
Query: 642 NTLR 653
++R
Sbjct: 127 ASIR 130
>AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein.
Length = 383
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 24 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 83
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 84 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 143
Query: 642 NTLR 653
++R
Sbjct: 144 ASIR 147
>AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein.
Length = 366
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 7 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 66
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 67 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 126
Query: 642 NTLR 653
++R
Sbjct: 127 ASIR 130
>AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 12 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 71
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 72 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 131
Query: 642 NTLR 653
++R
Sbjct: 132 ASIR 135
>AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 12 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 71
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 72 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 131
Query: 642 NTLR 653
++R
Sbjct: 132 ASIR 135
>AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 7 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 66
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 67 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 126
Query: 642 NTLR 653
++R
Sbjct: 127 ASIR 130
>AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 7 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 66
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 67 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 126
Query: 642 NTLR 653
++R
Sbjct: 127 ASIR 130
>AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 24 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 83
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 84 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 143
Query: 642 NTLR 653
++R
Sbjct: 144 ASIR 147
>AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 7 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 66
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 67 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 126
Query: 642 NTLR 653
++R
Sbjct: 127 ASIR 130
>AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 12 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 71
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 72 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 131
Query: 642 NTLR 653
++R
Sbjct: 132 ASIR 135
>AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 12 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 71
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 72 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 131
Query: 642 NTLR 653
++R
Sbjct: 132 ASIR 135
>AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 7 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 66
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 67 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 126
Query: 642 NTLR 653
++R
Sbjct: 127 ASIR 130
>AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 7 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 66
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 67 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 126
Query: 642 NTLR 653
++R
Sbjct: 127 ASIR 130
>AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 24 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 83
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 84 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 143
Query: 642 NTLR 653
++R
Sbjct: 144 ASIR 147
>AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 41.5 bits (93), Expect = 0.003
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +3
Query: 285 TKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTKLLVSNLDFGVSDSDIKELF 464
T S G ++T N+ + T T L+V+ L ++ + + LF
Sbjct: 7 TMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLF 66
Query: 465 SEFGILKSASVHYDR-SGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNIQLATSEI 641
G ++S + D+ +G+SLG V + DA KA+ NG+ L + + + A
Sbjct: 67 GSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 126
Query: 642 NTLR 653
++R
Sbjct: 127 ASIR 130
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 41.1 bits (92), Expect = 0.003
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 393 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 254 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 310
Query: 570 AMKQYNGVPLDGRAMNIQL 626
A+ N ++GRA+ ++L
Sbjct: 311 ALNSCNKREIEGRAIRLEL 329
Score = 35.1 bits (77), Expect = 0.22
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 504 DRSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNI 620
D G+S G A + F+ +ADA K ++ G +DGR++++
Sbjct: 195 DEDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISL 233
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 41.1 bits (92), Expect = 0.003
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 393 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 254 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 310
Query: 570 AMKQYNGVPLDGRAMNIQL 626
A+ N ++GRA+ ++L
Sbjct: 311 ALNSCNKREIEGRAIRLEL 329
Score = 35.1 bits (77), Expect = 0.22
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 504 DRSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNI 620
D G+S G A + F+ +ADA K ++ G +DGR++++
Sbjct: 195 DEDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISL 233
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 41.1 bits (92), Expect = 0.003
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 393 TGPTKLLV-SNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVK 569
+G +K LV SNL + ++ ++E+F + +K V +++G+S G A + F DA +
Sbjct: 254 SGESKTLVLSNLSYSATEETLQEVFEKATFIK---VPQNQNGKSKGYAFIEFASFEDAKE 310
Query: 570 AMKQYNGVPLDGRAMNIQL 626
A+ N ++GRA+ ++L
Sbjct: 311 ALNSCNKREIEGRAIRLEL 329
Score = 35.1 bits (77), Expect = 0.22
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 504 DRSGRSLGTADVVFERKADAVKAMKQYNGVPLDGRAMNI 620
D G+S G A + F+ +ADA K ++ G +DGR++++
Sbjct: 195 DEDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISL 233
>D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein 1
protein.
Length = 156
Score = 40.7 bits (91), Expect = 0.004
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSL-GTADVVFERKADAVKAMKQY 584
L V NL F ++ I ELFS+ G +K + D+ ++ G V + +ADA +M+
Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENSMRYI 101
Query: 585 NGVPLDGR 608
NG LD R
Sbjct: 102 NGTRLDDR 109
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 40.7 bits (91), Expect = 0.004
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Frame = +3
Query: 228 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 407
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 585 NGVPLDGRAMN 617
LDGR ++
Sbjct: 132 EH-RLDGRVID 141
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 40.7 bits (91), Expect = 0.004
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Frame = +3
Query: 228 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 407
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 585 NGVPLDGRAMN 617
LDGR ++
Sbjct: 132 EH-RLDGRVID 141
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 40.7 bits (91), Expect = 0.004
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Frame = +3
Query: 228 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 407
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 585 NGVPLDGRAMN 617
LDGR ++
Sbjct: 132 EH-RLDGRVID 141
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 40.7 bits (91), Expect = 0.004
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Frame = +3
Query: 228 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 407
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 585 NGVPLDGRAMN 617
LDGR ++
Sbjct: 132 EH-RLDGRVID 141
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 40.7 bits (91), Expect = 0.004
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Frame = +3
Query: 228 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 407
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 585 NGVPLDGRAMN 617
LDGR ++
Sbjct: 132 EH-RLDGRVID 141
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 40.7 bits (91), Expect = 0.004
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Frame = +3
Query: 228 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 407
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 585 NGVPLDGRAMN 617
LDGR ++
Sbjct: 132 EH-RLDGRVID 141
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 40.7 bits (91), Expect = 0.004
Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 1/131 (0%)
Frame = +3
Query: 228 GFRSNRSGGVQRGRNRGGITKSTNYSRGDVNSTWKHDMFNDFGERKLQRNSGTITTGPTK 407
G N V G + G T + G +T N G Q N+ K
Sbjct: 14 GATENGHEAVPEGESPAGA--GTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGK 71
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
+ V L + S D+K+ F++FG + ++ D +GRS G ++F+ A K + Q
Sbjct: 72 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 131
Query: 585 NGVPLDGRAMN 617
LDGR ++
Sbjct: 132 EH-RLDGRVID 141
>X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1)
ribonucleoprotein protein.
Length = 437
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V+ +++ ++S ++ F +G +K + Y RSG+ G A + +E + D A K
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164
Query: 585 NGVPLDGRAMNIQL 626
+G +DGR + + +
Sbjct: 165 DGKKIDGRRVLVDV 178
>X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for
hU1-70K snRNP protein (RNP8). ).
Length = 301
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V+ +++ ++S ++ F +G +K + Y RSG+ G A + +E + D A K
Sbjct: 56 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 115
Query: 585 NGVPLDGRAMNIQL 626
+G +DGR + + +
Sbjct: 116 DGKKIDGRRVLVDV 129
>X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for U1
RNA-associated 70K protein. ).
Length = 614
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V+ +++ ++S ++ F +G +K + Y RSG+ G A + +E + D A K
Sbjct: 282 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 341
Query: 585 NGVPLDGRAMNIQL 626
+G +DGR + + +
Sbjct: 342 DGKKIDGRRVLVDV 355
>M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen
protein.
Length = 428
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V+ +++ ++S ++ F +G +K + Y RSG+ G A + +E + D A K
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164
Query: 585 NGVPLDGRAMNIQL 626
+G +DGR + + +
Sbjct: 165 DGKKIDGRRVLVDV 178
>M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen
protein.
Length = 437
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V+ +++ ++S ++ F +G +K + Y RSG+ G A + +E + D A K
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164
Query: 585 NGVPLDGRAMNIQL 626
+G +DGR + + +
Sbjct: 165 DGKKIDGRRVLVDV 178
>M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small
nuclear ribonucleoprotein 70 kd protein mRNA, complete
cds. ).
Length = 437
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYD-RSGRSLGTADVVFERKADAVKAMKQY 584
L V+ +++ ++S ++ F +G +K + Y RSG+ G A + +E + D A K
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164
Query: 585 NGVPLDGRAMNIQL 626
+G +DGR + + +
Sbjct: 165 DGKKIDGRRVLVDV 178
>BC064588-1|AAH64588.1| 285|Homo sapiens HNRPM protein protein.
Length = 285
Score = 39.5 bits (88), Expect = 0.010
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
++ V NL F + +K+ F+E G + A + + +G+S G V FE A +A +
Sbjct: 209 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME-NGKSKGCGVVKFESPEVAERACRMM 267
Query: 585 NGVPLDGRAMNIQL 626
NG+ L GR +++++
Sbjct: 268 NGMKLSGREIDVRI 281
>BC034381-1|AAH34381.1| 266|Homo sapiens RNA binding motif protein
7 protein.
Length = 266
Score = 39.5 bits (88), Expect = 0.010
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +3
Query: 408 LLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQYN 587
L V NL+ V++ + ELF + G + + D+ G+ A V F+ + AM N
Sbjct: 12 LFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLN 71
Query: 588 GVPLDGRAMNIQ 623
G+ L GR + IQ
Sbjct: 72 GIKLYGRPIKIQ 83
>BC008895-1|AAH08895.2| 425|Homo sapiens HNRPM protein protein.
Length = 425
Score = 39.5 bits (88), Expect = 0.010
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +3
Query: 405 KLLVSNLDFGVSDSDIKELFSEFGILKSASVHYDRSGRSLGTADVVFERKADAVKAMKQY 584
++ V NL F + +K+ F+E G + A + + +G+S G V FE A +A +
Sbjct: 349 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME-NGKSKGCGVVKFESPEVAERACRMM 407
Query: 585 NGVPLDGRAMNIQL 626
NG+ L GR +++++
Sbjct: 408 NGMKLSGREIDVRI 421
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,879,311
Number of Sequences: 237096
Number of extensions: 1970528
Number of successful extensions: 7396
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 5395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6912
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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