Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14i14
(665 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK056149-1|BAB71104.1| 449|Homo sapiens protein ( Homo sapiens ... 90 8e-18
BC005121-1|AAH05121.1| 352|Homo sapiens C7orf26 protein protein. 55 2e-07
BC001076-1|AAH01076.1| 352|Homo sapiens C7orf26 protein protein. 55 2e-07
BC068483-1|AAH68483.1| 792|Homo sapiens RAD50 interactor 1 prot... 32 1.6
BC007120-1|AAH07120.2| 163|Homo sapiens RINT1 protein protein. 32 1.6
AK021847-1|BAB13910.1| 416|Homo sapiens protein ( Homo sapiens ... 32 1.6
AF317622-1|AAG42101.1| 821|Homo sapiens RAD50-interacting prote... 32 1.6
AC073073-2|AAQ96850.1| 151|Homo sapiens unknown protein. 32 1.6
AC073073-1|AAQ96849.1| 416|Homo sapiens unknown protein. 32 1.6
>AK056149-1|BAB71104.1| 449|Homo sapiens protein ( Homo sapiens
cDNA FLJ31587 fis, clone NT2RI2002243. ).
Length = 449
Score = 89.8 bits (213), Expect = 8e-18
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Frame = +3
Query: 90 LSDLKHSLRKYEFPVCAQEALVRIEQLLAGRTAPTNKQLVVA--MEIISEFIFCESXXXX 263
+SD++HSL + + A+E L ++ + + +V +E++ EF+F
Sbjct: 1 MSDIRHSLLRRDALSAAKEVLYHLDIYFSSQLQSAPLPIVDKGPVELLEEFVF--QVPKE 58
Query: 264 XXXXXXXLSSLQELQLIDILCEYLSSCNNETTKNTIFLSLF---GGMESQRRLKVLSILA 434
L+SLQELQL++I+C Y ++ + IF SLF G R+ +L L
Sbjct: 59 RSAQPKRLNSLQELQLLEIMCNYFQEQTKDSVRQIIFSSLFSPQGNKADDSRMSLLGKLV 118
Query: 435 SMAVSASSTPVLLAVGVWLQQTGCSSPQSLQLAENLIRDHFYLNTKNQKELRMLANTAPQ 614
SMAV+ PVL WLQ+T ++LA+ L+ D+ L + + L+ + + +P+
Sbjct: 119 SMAVAVCRIPVLECAASWLQRT--PVVYCVRLAKALVDDYCCLVPGSIQTLKQIFSASPR 176
Query: 615 FISNFITAVTELY 653
F FIT+VT LY
Sbjct: 177 FCCQFITSVTALY 189
>BC005121-1|AAH05121.1| 352|Homo sapiens C7orf26 protein protein.
Length = 352
Score = 55.2 bits (127), Expect = 2e-07
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Frame = +3
Query: 351 ETTKNTIFLSLF---GGMESQRRLKVLSILASMAVSASSTPVLLAVGVWLQQTGCSSPQS 521
++ + IF SLF G R+ +L L SMAV+ PVL WLQ+T
Sbjct: 69 DSVRQIIFSSLFSPQGNKADDSRMSLLGKLVSMAVAVCRIPVLECAASWLQRTPVV--YC 126
Query: 522 LQLAENLIRDHFYLNTKNQKELRMLANTAPQFISNFITAVTELY 653
++LA+ L+ D+ L + + L+ + + +P+F FIT+VT LY
Sbjct: 127 VRLAKALVDDYCCLVPGSIQTLKQIFSASPRFCCQFITSVTALY 170
>BC001076-1|AAH01076.1| 352|Homo sapiens C7orf26 protein protein.
Length = 352
Score = 55.2 bits (127), Expect = 2e-07
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Frame = +3
Query: 351 ETTKNTIFLSLF---GGMESQRRLKVLSILASMAVSASSTPVLLAVGVWLQQTGCSSPQS 521
++ + IF SLF G R+ +L L SMAV+ PVL WLQ+T
Sbjct: 69 DSVRQIIFSSLFSPQGNKADDSRMSLLGKLVSMAVAVCRIPVLECAASWLQRTPVV--YC 126
Query: 522 LQLAENLIRDHFYLNTKNQKELRMLANTAPQFISNFITAVTELY 653
++LA+ L+ D+ L + + L+ + + +P+F FIT+VT LY
Sbjct: 127 VRLAKALVDDYCCLVPGSIQTLKQIFSASPRFCCQFITSVTALY 170
>BC068483-1|AAH68483.1| 792|Homo sapiens RAD50 interactor 1
protein.
Length = 792
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 378 TRILYSL*SHYCKRTNIHIKYL*VVVLAMN*GLPPVLCLRD 256
TR L+ L SHYCKR + K++ + +N + L L+D
Sbjct: 709 TRNLFPLFSHYCKRPENYFKHIKEACIVLNLNVGSALLLKD 749
>BC007120-1|AAH07120.2| 163|Homo sapiens RINT1 protein protein.
Length = 163
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 378 TRILYSL*SHYCKRTNIHIKYL*VVVLAMN*GLPPVLCLRD 256
TR L+ L SHYCKR + K++ + +N + L L+D
Sbjct: 80 TRNLFPLFSHYCKRPENYFKHIKEACIVLNLNVGSALLLKD 120
>AK021847-1|BAB13910.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ11785 fis, clone HEMBA1006035. ).
Length = 416
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 378 TRILYSL*SHYCKRTNIHIKYL*VVVLAMN*GLPPVLCLRD 256
TR L+ L SHYCKR + K++ + +N + L L+D
Sbjct: 333 TRNLFPLFSHYCKRPENYFKHIKEACIVLNLNVGSALLLKD 373
>AF317622-1|AAG42101.1| 821|Homo sapiens RAD50-interacting protein
1 protein.
Length = 821
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 378 TRILYSL*SHYCKRTNIHIKYL*VVVLAMN*GLPPVLCLRD 256
TR L+ L SHYCKR + K++ + +N + L L+D
Sbjct: 738 TRNLFPLFSHYCKRPENYFKHIKEACIVLNLNVGSALLLKD 778
>AC073073-2|AAQ96850.1| 151|Homo sapiens unknown protein.
Length = 151
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 378 TRILYSL*SHYCKRTNIHIKYL*VVVLAMN*GLPPVLCLRD 256
TR L+ L SHYCKR + K++ + +N + L L+D
Sbjct: 68 TRNLFPLFSHYCKRPENYFKHIKEACIVLNLNVGSALLLKD 108
>AC073073-1|AAQ96849.1| 416|Homo sapiens unknown protein.
Length = 416
Score = 32.3 bits (70), Expect = 1.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 378 TRILYSL*SHYCKRTNIHIKYL*VVVLAMN*GLPPVLCLRD 256
TR L+ L SHYCKR + K++ + +N + L L+D
Sbjct: 333 TRNLFPLFSHYCKRPENYFKHIKEACIVLNLNVGSALLLKD 373
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,061,356
Number of Sequences: 237096
Number of extensions: 1776659
Number of successful extensions: 5248
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5243
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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