Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14i14
         (665 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   4.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.0  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 17/67 (25%), Positives = 31/67 (46%)
 Frame = -2

Query: 514 GDEQPVCWSQTPTASNTGVLEADTAMLARILSTFNLL*LSIPPNSDKNIVFFVVSLLQED 335
           G  +P  WS     +     + D +   +IL+T   L  ++ P   +NI  +  + L   
Sbjct: 326 GAGRPAFWSLRKAFARK---KTDYSSFGKILATEPTLFSNVTPKFPRNIDEYNNNDLDTK 382

Query: 334 KYSHKIS 314
           K+++KIS
Sbjct: 383 KWNNKIS 389


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = -2

Query: 199 LFV-GAVRPANNCSILTRAS*AHTGNSYFL 113
           +FV G V   + C ++ R    HT  +Y+L
Sbjct: 63  IFVTGLVGNVSTCVVIARNKSMHTATNYYL 92


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 541 RFSASCRDCGDEQPVCWSQTPTASNTGV 458
           R      D G  +P C    PT+ NTG+
Sbjct: 84  RMIQDAEDKGLLKPGCTIIEPTSGNTGI 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,101
Number of Sequences: 438
Number of extensions: 3576
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)