Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14i12
(644 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box as... 28 1.0
SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyc... 28 1.3
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 27 2.3
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 4.0
SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|... 26 5.3
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 7.1
SPCC126.12 |||NGG1p interacting factor 3 family|Schizosaccharomy... 25 7.1
SPAC1687.16c |erg3||C-5 sterol desaturase Erg3 |Schizosaccharomy... 25 9.3
SPBC17D11.07c |rpn2||19S proteasome regulatory subunit Rpn2|Schi... 25 9.3
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 25 9.3
>SPAC6F12.11c |sfc1||transcription factor TFIIIC complex A box
associated subunit Sfc1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 28.3 bits (60), Expect = 1.0
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 572 LNNLDPKFLHYLSFAV 525
LN+LDP + HYL FA+
Sbjct: 241 LNHLDPSYTHYLKFAL 256
>SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 618
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 263 FCYIFRYGFSVSRESLVLRYHFIVFIILVYFHFIIIRVC 147
+CY+ G ++ + + RY+ IV ++YF I+I C
Sbjct: 139 WCYVTPVGAALIADQFLGRYNTIVCSAVIYFIGILILTC 177
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 39 AKKKMYSRFVFMCFVQIYLIELC 107
AK + Y R +F FV +YL E+C
Sbjct: 620 AKGRNYPRALFQVFVGLYLAEVC 642
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 296 GVLSVYFF*DVFCYIFRYGFSVSRESLVLRYHFIV 192
GVL+VY F F ++ F S+++L R H ++
Sbjct: 1083 GVLAVYIFKKKFYHVKFNAFGTSKQNLHFRQHDVL 1117
>SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 25.8 bits (54), Expect = 5.3
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +3
Query: 129 HLNKVSTHSNNNEMKIDKDNKYDEMISKNERFARHAEAITENVAEHILK 275
H+ + + N+E + KDN+ D+ I +++ FA + V ++LK
Sbjct: 178 HMRLNALKAANDEGEDVKDNEQDDNIDESDPFANPKASYRGGVLSNLLK 226
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +3
Query: 96 IELCCSNSKDLHLNKVSTHSNNNEMKIDKDNKYDEMI 206
+ L +K L+ N++S+H N + ++K+N Y + +
Sbjct: 1013 VALLLEENKHLN-NELSSHRNAEKQHLEKENDYKQQL 1048
>SPCC126.12 |||NGG1p interacting factor 3 family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 278
Score = 25.4 bits (53), Expect = 7.1
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 96 IELCCSNSKDLHLNKVSTHSNNN---EMKIDKDNKYDEMISKNERFARHAEAITENVAEH 266
+++C N D H++KVS + + M D D + +S ++ A A+ I+ + H
Sbjct: 177 VQVCAPNGLDSHISKVSLCAGSGGSVVMNTDADLYFTGELSHHQVLAAMAKGISVILCGH 236
>SPAC1687.16c |erg3||C-5 sterol desaturase Erg3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 300
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 198 HRIYYPCLFSFHYYSSVC*PYSN 130
HR YP L H+ +C PY++
Sbjct: 142 HRYVYPRLHKLHHKWIICTPYAS 164
>SPBC17D11.07c |rpn2||19S proteasome regulatory subunit
Rpn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 965
Score = 25.0 bits (52), Expect = 9.3
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 111 SNSKDLHLNKVSTHSNNNEMKIDKDNKYDEMISKNERFARHAEAITEN 254
+ +K K S SN++EMKIDK ++ + E ++ I+ N
Sbjct: 824 ARAKRAEREKASKGSNDDEMKIDKKTTEEKEATPMEMDEEKSQDISIN 871
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 96 IELCCSNSKDLHLNKVSTHSNNNEMK--IDKDNKYDEMISKNE 218
I+L LH+N++S+HS E + + YD++I+ +
Sbjct: 1914 IKLGLQKPNKLHVNELSSHSGTEESESLSNGQTSYDDIIAMTD 1956
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,149,367
Number of Sequences: 5004
Number of extensions: 37262
Number of successful extensions: 124
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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