Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14i10
         (576 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533543-1|CAG38574.1|  369|Homo sapiens TADA3L protein.               34   0.31 
BC013433-1|AAH13433.1|  432|Homo sapiens transcriptional adaptor...    34   0.31 
BC009240-1|AAH09240.1|  369|Homo sapiens transcriptional adaptor...    34   0.31 
AF069733-1|AAC39903.1|  432|Homo sapiens ADA3-like protein protein.    34   0.31 
X87870-1|CAA61133.1|  455|Homo sapiens Hepatocyte nuclear factor...    29   8.9  
M17410-1|AAA59913.1|  355|Homo sapiens NCAM protein.                   29   8.9  

>CR533543-1|CAG38574.1|  369|Homo sapiens TADA3L protein.
          Length = 369

 Score = 34.3 bits (75), Expect = 0.31
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +3

Query: 372 KVETCPIPY--IKIQDNAVLLPRFTAVAARSADEPIGMDXXXXXXXXXXXXXCNTALRCR 545
           +++ CP+ +   K  D+  + PR+TAV ARS D+ IG++              + + R R
Sbjct: 3   ELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRRLR 62

Query: 546 YFQSEIE 566
             ++E +
Sbjct: 63  VLEAETQ 69


>BC013433-1|AAH13433.1|  432|Homo sapiens transcriptional adaptor 3
           (NGG1 homolog, yeast)-like protein.
          Length = 432

 Score = 34.3 bits (75), Expect = 0.31
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +3

Query: 372 KVETCPIPY--IKIQDNAVLLPRFTAVAARSADEPIGMDXXXXXXXXXXXXXCNTALRCR 545
           +++ CP+ +   K  D+  + PR+TAV ARS D+ IG++              + + R R
Sbjct: 3   ELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRRLR 62

Query: 546 YFQSEIE 566
             ++E +
Sbjct: 63  VLEAETQ 69


>BC009240-1|AAH09240.1|  369|Homo sapiens transcriptional adaptor 3
           (NGG1 homolog, yeast)-like protein.
          Length = 369

 Score = 34.3 bits (75), Expect = 0.31
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +3

Query: 372 KVETCPIPY--IKIQDNAVLLPRFTAVAARSADEPIGMDXXXXXXXXXXXXXCNTALRCR 545
           +++ CP+ +   K  D+  + PR+TAV ARS D+ IG++              + + R R
Sbjct: 3   ELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRRLR 62

Query: 546 YFQSEIE 566
             ++E +
Sbjct: 63  VLEAETQ 69


>AF069733-1|AAC39903.1|  432|Homo sapiens ADA3-like protein protein.
          Length = 432

 Score = 34.3 bits (75), Expect = 0.31
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +3

Query: 372 KVETCPIPY--IKIQDNAVLLPRFTAVAARSADEPIGMDXXXXXXXXXXXXXCNTALRCR 545
           +++ CP+ +   K  D+  + PR+TAV ARS D+ IG++              + + R R
Sbjct: 3   ELKDCPLQFHDFKSVDHLKVCPRYTAVLARSEDDGIGIEELDTLQLELETLLSSASRRLR 62

Query: 546 YFQSEIE 566
             ++E +
Sbjct: 63  VLEAETQ 69


>X87870-1|CAA61133.1|  455|Homo sapiens Hepatocyte nuclear factor 4A
           protein.
          Length = 455

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 258 HNSKGRLANKDNGKPSSPGITPYTKPTKIPGSVSTAKIKVETCPIPYIKIQD 413
           H S G+++  +  +PS PG +       +PG+V+T    +   P P I  Q+
Sbjct: 402 HLSNGQMSTPETPQPSPPGGSGSESYKLLPGAVATIVKPLSAIPQPTITKQE 453


>M17410-1|AAA59913.1|  355|Homo sapiens NCAM protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +3

Query: 273 RLANKDNGKPSSPG-ITPYTKPTKIPGSVSTAKIKVETCPIP 395
           R  N D GK + P   TP T+P K P        + ET P P
Sbjct: 294 RTPNHDGGKHTEPNETTPLTEPEKAPVEAKPECQETETKPAP 335


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,453,529
Number of Sequences: 237096
Number of extensions: 1413467
Number of successful extensions: 2543
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2543
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)