Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14i10
         (576 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   2.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   6.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.7  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   8.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   8.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   8.7  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   8.7  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   8.7  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   8.7  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 398 VWNWACLNFDFGSRNR 351
           ++ W  ++FDFGS  R
Sbjct: 40  IYEWKHIDFDFGSDER 55


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 105 YHVYDSTCVDFLRQKRNS*SFSSTAKQMP 19
           Y +Y +    FLR K+    +S +  QMP
Sbjct: 421 YMLYQNILSYFLRYKKLQPQYSQSELQMP 449


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 105 YHVYDSTCVDFLRQKRNS*SFSSTAKQMP 19
           Y +Y      FLR K+    +S +  QMP
Sbjct: 421 YMLYQKILSYFLRYKKLQPQYSQSELQMP 449


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 401 NVWNWACLNFDFGS 360
           ++W   CL F FG+
Sbjct: 305 DIWTGVCLTFVFGA 318


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 401 NVWNWACLNFDFGS 360
           ++W   CL F FG+
Sbjct: 305 DIWTGVCLTFVFGA 318


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 311 WNYTIH*TNKDSRFCFYCQN 370
           WN+T+    +D+R  +Y  N
Sbjct: 15  WNHTVSSGERDTRTEYYLPN 34


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 355 TEPGIFVGLVYGV 317
           T+PG+  G+V GV
Sbjct: 128 TDPGLVAGIVIGV 140


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 355 TEPGIFVGLVYGV 317
           T+PG+  G+V GV
Sbjct: 99  TDPGLVAGIVIGV 111


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -2

Query: 347 WNLCWFSVW 321
           W LC+F +W
Sbjct: 184 WILCYFCIW 192


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,369
Number of Sequences: 438
Number of extensions: 2810
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)