BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14i09
(353 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 27 0.086
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 0.61
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 1.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 1.9
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 2.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 2.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 2.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 2.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 2.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 2.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 2.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 2.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 3.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 3.3
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 3.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 3.3
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 5.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 5.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 5.7
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 20 7.5
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 20 7.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 20 7.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 20 7.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 20 7.5
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 20 7.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 20 7.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 20 7.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 7.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 20 7.5
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 20 9.9
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 26.6 bits (56), Expect = 0.086
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 69 IAMNKPLNQEDIAAMENQLRNCVEDDRKYWQVN 167
+ NKP+ E + + N+++ V DD + VN
Sbjct: 365 VGSNKPVKDEYMLVLSNRMQKIVNDDFNFDDVN 397
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.8 bits (49), Expect = 0.61
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 347 FSNYKFLFFDIFRVRSALVPSP 282
++NYK L+++I + VP P
Sbjct: 346 YNNYKKLYYNIINIEQIPVPVP 367
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 1.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 347 FSNYKFLFFDIFRVRSALVPSP 282
++NYK L+++I + VP P
Sbjct: 101 YNNYKKLYYNINYIEQVPVPIP 122
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 1.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 344 SNYKFLFFDIFRVRSALVPSP 282
+NYK L+++I + VP P
Sbjct: 329 NNYKPLYYNIINIEQIPVPVP 349
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 2.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 347 FSNYKFLFFDIFRVRSALVPSP 282
++NYK L+++I + VP P
Sbjct: 103 YNNYKKLYYNINYIEQIPVPVP 124
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 2.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 347 FSNYKFLFFDIFRVRSALVPSP 282
++NYK L+++I + VP P
Sbjct: 103 YNNYKKLYYNINYIEQIPVPVP 124
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 2.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 347 FSNYKFLFFDIFRVRSALVPSP 282
++NYK L+++I + VP P
Sbjct: 103 YNNYKKLYYNINYIEQIPVPVP 124
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 2.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 347 FSNYKFLFFDIFRVRSALVPSP 282
++NYK L+++I + VP P
Sbjct: 103 YNNYKKLYYNINYIEQIPVPVP 124
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 2.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 347 FSNYKFLFFDIFRVRSALVPSP 282
++NYK L+++I + VP P
Sbjct: 103 YNNYKKLYYNINYIEQIPVPVP 124
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 2.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 347 FSNYKFLFFDIFRVRSALVPSP 282
++NYK L+++I + VP P
Sbjct: 103 YNNYKKLYYNINYIEQIPVPVP 124
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 2.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 347 FSNYKFLFFDIFRVRSALVPSP 282
++NYK L+++I + VP P
Sbjct: 103 YNNYKKLYYNINYIEQIPVPVP 124
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 2.5
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 347 FSNYKFLFFDIFRVRSALVPSP 282
++NYK L+++I + VP P
Sbjct: 111 YNNYKKLYYNINYIEQIPVPVP 132
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 3.3
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -1
Query: 347 FSNYKFLFFDIFRVRSALVPSP 282
++NYK L+++I + +P P
Sbjct: 103 YNNYKKLYYNINYIEQIPIPVP 124
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 122 LILHRCNVFLVQGLVHCNFFILMTNHF 42
L+ + V V+ +CN F L +HF
Sbjct: 525 LLTNARRVASVRAETYCNLFSLSVDHF 551
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +3
Query: 75 MNKPLNQEDIAAMENQLRNCVEDDRKYWQVN 167
MN+ E + A+ N+++ V +D + +VN
Sbjct: 370 MNRIHKNEYMLALSNRMQKIVNNDFNFDEVN 400
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -1
Query: 122 LILHRCNVFLVQGLVHCNFFILMTNHF 42
L+ + V V+ +CN F L +HF
Sbjct: 493 LLTNARRVASVRAETYCNLFSLSVDHF 519
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -1
Query: 350 FFSNYKFLFFDIFRVRSALVPSP 282
+ +NYK L+++I + +P P
Sbjct: 100 YCNNYKKLYYNINYIEQIPIPVP 122
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 5.7
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = -1
Query: 350 FFSNYKFLFFDIFRVRSALVPSP 282
+ +NYK L+++I + +P P
Sbjct: 100 YCNNYKKLYYNINYIEQIPIPVP 122
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.6 bits (41), Expect = 5.7
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 344 SNYKFLFFDIFRVRSALVPSP 282
+NYK L+++I + VP P
Sbjct: 346 NNYKKLYYNINYIEQIPVPVP 366
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.2 bits (40), Expect = 7.5
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 234 AHLRPLEKSDYKQKIRRTWNQCAT 305
A RPL+K Q +RT AT
Sbjct: 326 ADTRPLKKEPITQSNKRTAGNLAT 349
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 344 SNYKFLFFDIFRVRSALVPSP 282
+NYK L+++I + VP P
Sbjct: 96 NNYKPLYYNINYIEQIPVPVP 116
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 344 SNYKFLFFDIFRVRSALVPSP 282
+NYK L+++I + VP P
Sbjct: 96 NNYKPLYYNINYIEQIPVPVP 116
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 344 SNYKFLFFDIFRVRSALVPSP 282
+NYK L+++I + VP P
Sbjct: 96 NNYKPLYYNINYIEQIPVPVP 116
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 344 SNYKFLFFDIFRVRSALVPSP 282
+NYK L+++I + VP P
Sbjct: 96 NNYKPLYYNINYIEQIPVPVP 116
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 7.5
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -1
Query: 344 SNYKFLFFDIFRVRSALVPSP 282
+NYK L+++I + +P P
Sbjct: 321 NNYKKLYYNINYIEQIPIPVP 341
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 344 SNYKFLFFDIFRVRSALVPSP 282
+NYK L+++I + VP P
Sbjct: 329 NNYKPLYYNINYIEQIPVPVP 349
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 344 SNYKFLFFDIFRVRSALVPSP 282
+NYK L+++I + VP P
Sbjct: 329 NNYKPLYYNINYIEQIPVPVP 349
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 344 SNYKFLFFDIFRVRSALVPSP 282
+NYK L+++I + VP P
Sbjct: 329 NNYKPLYYNINYIEQIPVPVP 349
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 344 SNYKFLFFDIFRVRSALVPSP 282
+NYK L+++I + VP P
Sbjct: 318 NNYKPLYYNINYIEQIPVPVP 338
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 19.8 bits (39), Expect = 9.9
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = -3
Query: 138 LRNSGADSPSLQCLPGSGACSLQFLYIDDKPLLLYVALSNK 16
L N+ + + CLP G + + D PLL V +
Sbjct: 32 LMNTMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCADTR 72
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,555
Number of Sequences: 438
Number of extensions: 2300
Number of successful extensions: 30
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8184330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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