Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14i07
(572 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 33 0.039
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 32 0.069
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 31 0.091
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 31 0.12
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 31 0.12
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 31 0.16
SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces po... 30 0.21
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 30 0.21
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 30 0.28
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 29 0.48
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 29 0.48
SPAC12B10.04 |||tubulin-tyrosine ligase |Schizosaccharomyces pom... 29 0.64
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 28 0.84
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 28 1.1
SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyce... 27 1.5
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 27 1.5
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 27 1.5
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 27 2.0
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 27 2.0
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 27 2.6
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 27 2.6
SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces pombe... 27 2.6
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 26 3.4
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/... 26 3.4
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 26 3.4
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 26 3.4
SPAC5H10.06c |adh4||alcohol dehydrogenase Adh4|Schizosaccharomyc... 26 3.4
SPBC902.02c |ctf18|chl12|DNA replication factor C complex subuni... 26 4.5
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 26 4.5
SPAC12B10.16c |mug157||conserved protein |Schizosaccharomyces po... 26 4.5
SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr 3... 26 4.5
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 25 6.0
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.0
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 25 6.0
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 25 6.0
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 25 6.0
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 25 6.0
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 6.0
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 6.0
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 25 7.9
SPAC1687.03c |rfc4||DNA replication factor C complex subunit Rfc... 25 7.9
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 25 7.9
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 25 7.9
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 25 7.9
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 32.7 bits (71), Expect = 0.039
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 129 RFFILTGDPGIGKTTLTKKISSLLEAEGVKVN-GFITEEVRNKGVREGF 272
+ L G PG+GKT++ K I+S L E + + G +T+ KG R +
Sbjct: 572 KIMCLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTY 620
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 31.9 bits (69), Expect = 0.069
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVRNKGVRE 266
I+ G PG GKTTL ++++ E E + + + E + G E
Sbjct: 12 IICGTPGTGKTTLAEQVAETTELENICIGDVVKENHLHFGFDE 54
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 31.5 bits (68), Expect = 0.091
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 87 IRITKMS-KNPNTTIRFFILTGDPGIGKTTLTKKISSLL 200
IR+++ +PN I F+ G G GKT LTK ++S +
Sbjct: 600 IRLSRAGLSDPNQPIASFLFCGPSGTGKTLLTKALASFM 638
Score = 26.2 bits (55), Expect = 3.4
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVN 224
+L G+PG+GKT++ + ++ + + V N
Sbjct: 206 VLIGEPGVGKTSIAEGLARRIIDDDVPAN 234
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 31.1 bits (67), Expect = 0.12
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 54 KDSITIDNKYTIRITKMSKNPNTTIRFFILTGDPGIGKTTLTKKISSLLEAEGVKVNG 227
++++ + Y + + P+ + FF G PG GKT L K I++ A + V G
Sbjct: 510 RETVQMPVMYAEKFLRFGVTPSKGVLFF---GPPGTGKTLLAKAIANECSANFISVKG 564
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 31.1 bits (67), Expect = 0.12
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVRNKGVREGFDVVTSAGVRGR 305
+L G PG GKT L K +++ +A + + G E+ NK V E V +R R
Sbjct: 530 LLWGPPGCGKTLLAKAVANESKANFISIRG---PELLNKYVGESERAVRQVFLRAR 582
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 30.7 bits (66), Expect = 0.16
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 87 IRITKMS-KNPNTTIRFFILTGDPGIGKTTLTKKISSLL 200
+R+++ +N N + F+ G G+GKT LTK ++ L
Sbjct: 518 VRLSRAGLQNTNRPLASFLFLGPTGVGKTALTKALAEFL 556
>SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 811
Score = 30.3 bits (65), Expect = 0.21
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 402 CLNETTSQPNLLVIDEIGSMELSSKKFKN 488
CL+E T +PN LV++ I S+ S K KN
Sbjct: 783 CLDEDTKKPNHLVLNRIVSLREDSAKNKN 811
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 30.3 bits (65), Expect = 0.21
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 126 IRFFILTGDPGIGKTTLTKKISSLLEAEGVK-VNGFITEEVRNKGV 260
++ +L G PG GKT + ++I +L A K VNG E+ NK V
Sbjct: 304 VKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNG---PEILNKYV 346
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 29.9 bits (64), Expect = 0.28
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNG 227
+L G PG GKT L K +++ L E V + G
Sbjct: 692 LLYGPPGTGKTLLAKAVATELSLEFVSIKG 721
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 132 FFILTGDPGIGKTTLTKKISSLLEAEGVKVNGF 230
FF+L G+P GKT ++++SL A ++ +
Sbjct: 424 FFLLHGNPFTGKTKAVEEVASLFSAPVFTISSY 456
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 29.1 bits (62), Expect = 0.48
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVRNKGVREGFDVVTSAGVRGR 305
+L G PG GKT L + ++ + + ++V+G E+ K + EG +V V R
Sbjct: 183 LLYGPPGTGKTLLARAVAHHTDCKFIRVSG---SELVQKYIGEGSRMVRELFVMAR 235
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 29.1 bits (62), Expect = 0.48
Identities = 10/15 (66%), Positives = 15/15 (100%)
Frame = -2
Query: 397 NAIFSNSSIKTPYLP 353
N+++SNSS++TPYLP
Sbjct: 313 NSLYSNSSMQTPYLP 327
>SPAC12B10.04 |||tubulin-tyrosine ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 403
Score = 28.7 bits (61), Expect = 0.64
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 381 FENIALPCLNETTSQPNLLVIDEIGSMELSSKKFKNVIENIFSS 512
FE + L + SQ LL ++ + + K N+IEN+FS+
Sbjct: 326 FEIFGVDFLVDCESQVYLLEVNSYPDFKQTGKNLSNIIENLFSA 369
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.3 bits (60), Expect = 0.84
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +3
Query: 57 DSITIDNKYTIRITKMSKNPNTTIRFF------ILTGDPGIGKTTLTKKISSLLEAEGVK 218
DS+ D+ Y++ N + +R +L G PG+GKT+L ++ + V+
Sbjct: 1530 DSVESDSTYSLHTDTTLMNASKVLRALQVLKPILLEGSPGVGKTSLITALARETGHQLVR 1589
Query: 219 VN 224
+N
Sbjct: 1590 IN 1591
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 129 RFFILTGDPGIGKTTLTKKISSLLEAEGVKVNG 227
R +L G PG GKT L K +++ A ++V G
Sbjct: 169 RGVLLYGPPGTGKTMLVKAVANSTAANFIRVVG 201
>SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 760
Score = 27.5 bits (58), Expect = 1.5
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 141 LTGDPGIGKTTLTKKISSLLEAEGVKVNG 227
LTGDPG+ K+ L K IS + GV G
Sbjct: 401 LTGDPGVAKSQLLKYISK-VAPRGVYTTG 428
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVR 248
+L+G PGIGKTT ++ L + +++N T R
Sbjct: 413 LLSGPPGIGKTTAAHLVAKLEGYDVLELNASDTRSKR 449
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVN-GFITEE 242
+L G PG GKT L K ++ +A + V+ G +T++
Sbjct: 129 LLYGPPGCGKTMLAKALAKQSQATFINVSVGLLTDK 164
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 27.1 bits (57), Expect = 2.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNG 227
IL G PG GKT L K +++ A ++V G
Sbjct: 229 ILYGAPGTGKTLLAKAVANQTSATFLRVVG 258
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNG 227
+L G PG GKT L ISS + + + G
Sbjct: 644 LLFGYPGCGKTYLASAISSTFPVQFISIKG 673
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 26.6 bits (56), Expect = 2.6
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +3
Query: 90 RITKMSKNPNTTIRFFILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVRNKGVREG 269
R K+ +P I +L G PG GKT + +++ +A ++V G E+ K V EG
Sbjct: 204 RFVKLGIDPPKGI---MLYGPPGTGKTLCARAVANRTDATFIRVIG---SELVQKYVGEG 257
Query: 270 FDVV 281
+V
Sbjct: 258 ARMV 261
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 26.6 bits (56), Expect = 2.6
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -1
Query: 563 PVFNRYGCQHNIVRILLRTKNIFDYIFKL 477
P++ Y H I+R+ L +++ DY+ K+
Sbjct: 164 PIYEGYALPHAIMRLDLAGRDLTDYLMKI 192
>SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 513
Score = 26.6 bits (56), Expect = 2.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 278 HIEAFSYSFISDFFSNKTINFYTFCF*ERRYFLGQSSF 165
H + SY DFFS I+F T C YF G ++F
Sbjct: 157 HTKRLSYDVKCDFFSAARISFGTTCL----YFNGGTAF 190
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 183 KISSLLEAEGVKVNGFITEEVRNKGVREGFDVVTSAGVRGRLARD 317
K+ L E GV VNG + RNK +S GV LA +
Sbjct: 471 KVIQLREQNGVAVNGRVCYPTRNKHSEISAQSSSSLGVTKSLASE 515
>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
reductase/acetylglutamate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 885
Score = 26.2 bits (55), Expect = 3.4
Identities = 21/87 (24%), Positives = 34/87 (39%)
Frame = -1
Query: 389 IFKLFNKNPVFTNFALNRDSDEILVPSQTAPDSCTSNHIEAFSYSFISDFFSNKTINFYT 210
I K + F + + S + S T + +S + SYS S F NK +N
Sbjct: 484 ISKFIQSDKPFADAIIQTQSTKPPTASSTTNNPSSSQINQKRSYSTSSLFSKNKKMNRSL 543
Query: 209 FCF*ERRYFLGQSSFTDARIAC*YKKP 129
F +R+F ++ T + KP
Sbjct: 544 FLKGGKRFFSAEAQKTQKPLKAVSSKP 570
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 36 LSILIFKDSITIDNKYTIRITKMSKNPNTTIRFFILTGDPGIGKTTLTK 182
L FK+SI I + +++ + + KN RFF P + K LTK
Sbjct: 768 LGYSFFKESIEIRSSHSVLLRTILKNSELCHRFF-----PSMSKKDLTK 811
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 36 LSILIFKDSITIDNKYTIRITKMSKNPNTTIRFFILTGDPGIGKTTLTK 182
L FK+SI I + +++ + + KN RFF P + K LTK
Sbjct: 768 LGYSFFKESIEIRSSHSVLLRTILKNSELCHRFF-----PSMSKKDLTK 811
>SPAC5H10.06c |adh4||alcohol dehydrogenase Adh4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 422
Score = 26.2 bits (55), Expect = 3.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVN 224
++ DPGI K L K+ +LLE + + V+
Sbjct: 78 LIVTDPGIIKVGLYDKVKALLEEQSITVH 106
>SPBC902.02c |ctf18|chl12|DNA replication factor C complex subunit
Ctf18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 960
Score = 25.8 bits (54), Expect = 4.5
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 60 SITIDNKYTIRITKMSKNPNTTIRFFILTGDPGIGKTTLTKKISSLLEAEGVKVN 224
S+ + ++T IT S P+ R +LTG G GKTTL I+ + +++N
Sbjct: 397 SMRFNPRFT-NITSDSDRPDK--RIMMLTGLAGAGKTTLAHVIAHQAGYKVLEIN 448
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 25.8 bits (54), Expect = 4.5
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 123 TIRFFILTGDPGIGKTTLT-KKISSLLE 203
T R I+ G PG GK+ +T K I +LLE
Sbjct: 385 TKRLSIIQGPPGTGKSFVTLKAIETLLE 412
>SPAC12B10.16c |mug157||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 25.8 bits (54), Expect = 4.5
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 357 KYG-VFIEEFENIALPCLNETTSQPNLLVIDEIGSMELSSKKFKNVIENIFSSEQNSY 527
K+G V+ E + + + P+LL + +G +E + N + I SSE N Y
Sbjct: 353 KFGKVYAYEVDGYGSILFMDDANVPSLLSLPYLGFVERDDPVYVNTRKMILSSEGNPY 410
>SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 555
Score = 25.8 bits (54), Expect = 4.5
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -2
Query: 451 ISSITSKFGCDVVSFKHG--NAIFSNSSIKTPY 359
+ I+ GCDV KHG NA +IK Y
Sbjct: 463 VFKISQVLGCDVYRLKHGGSNACAVGGAIKAAY 495
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 25.4 bits (53), Expect = 6.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKV 221
+L G PG GKT L + +++ L +KV
Sbjct: 170 LLYGPPGTGKTLLARAVAASLGVNFLKV 197
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.4 bits (53), Expect = 6.0
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -1
Query: 560 VFNRYGCQHNIV-RILLRTKNIFDYIF--KLFTR*FHASNF 447
V N YGC+HN V + + FD++ F+R H +F
Sbjct: 2039 VLNEYGCEHNTVWPPWVPFETTFDFVLTPAAFSRFLHRVSF 2079
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 25.4 bits (53), Expect = 6.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNG 227
IL+G PG GKT L K + + V+G
Sbjct: 333 ILSGPPGTGKTLLAKATAGEANVPFLSVSG 362
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.4 bits (53), Expect = 6.0
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -2
Query: 385 SNSSIKTPYLPILRLIGIVMRSWSLAKRPLTPALVTTSKPSLTPLFLTSSVIKPLTFTPS 206
SNS P + + +L I+ + SLAK L+P LFLTS++ +P
Sbjct: 593 SNSRSTIP-ITVRQLEAIIRITESLAKMSLSPIASEAHATEAIRLFLTSTLAAATQSSPE 651
Query: 205 ASK 197
++
Sbjct: 652 VTE 654
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 129 RFFILTGDPGIGKTTLTKKISSLLEAEGVKVNGFI 233
R + G PG GKT + + +++ +E KV+ ++
Sbjct: 301 RGVLFHGPPGTGKTLMARALAAACSSENKKVSFYM 335
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 129 RFFILTGDPGIGKTTLTKKIS 191
R +LTG PG GKT L + ++
Sbjct: 301 RGVLLTGPPGTGKTMLARAVA 321
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.4 bits (53), Expect = 6.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLL 200
++TG+ G GKT TKK+ L
Sbjct: 179 LVTGESGAGKTETTKKVIQYL 199
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.4 bits (53), Expect = 6.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 320 LVPSQTAPDSCTSNHIEAFSYSFISDFFS 234
L S T+PDSCT ++ S + D FS
Sbjct: 71 LTSSPTSPDSCTFGNMTFQWTSLLQDVFS 99
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 25.0 bits (52), Expect = 7.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 102 MSKNPNTTIRFFILTGDPGIGKTTLTKK 185
M++ N +L GD G GKTT K+
Sbjct: 1 MAQPQNVPTFKLVLVGDGGTGKTTFVKR 28
>SPAC1687.03c |rfc4||DNA replication factor C complex subunit
Rfc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 25.0 bits (52), Expect = 7.9
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 69 IDNKYTI-RITKMSKNPNTTIRFFILTGDPGIGKTT 173
+ N+ TI R+ ++K N + +++G PGIGKTT
Sbjct: 36 VGNEETIDRLKVIAKEGN--MPHLVISGMPGIGKTT 69
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 25.0 bits (52), Expect = 7.9
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 129 RFFILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVRNKGVREGFDVVTSAGV-RGR 305
R + LTG GIGK+TL + +S A + E+ V A V R
Sbjct: 209 RRYGLTGRNGIGKSTLLRALSRREIAIPTHITILHVEQEMTGDDTPALQSVLDADVWRKY 268
Query: 306 LARDQDLIT 332
L +DQ+ IT
Sbjct: 269 LIQDQEKIT 277
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.0 bits (52), Expect = 7.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEA 206
++TG+ G GKT TK+I L A
Sbjct: 167 LVTGESGAGKTENTKRIIQYLAA 189
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 25.0 bits (52), Expect = 7.9
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -1
Query: 371 KNPVFTNFALNRDSDEILVPSQTAPDSCTSNHIEAFSYSFISDFFSNKTINFYTF 207
K+P+F NF+ + + PS+T P S +E S +SD +F F
Sbjct: 837 KSPLF-NFSADAPTFTFNKPSETPPFSFNKPLVEKESKQDVSDTSDRSPFSFKAF 890
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,050,374
Number of Sequences: 5004
Number of extensions: 41221
Number of successful extensions: 203
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 244081442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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