Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14i07
(572 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 30 1.0
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 30 1.0
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 30 1.0
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 29 1.8
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 29 1.8
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 29 1.8
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 29 1.8
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 29 1.8
AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal m... 29 1.8
AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal m... 29 1.8
AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal m... 29 1.8
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 29 2.3
AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical... 29 2.3
AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical... 29 2.3
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 29 3.1
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 29 3.1
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 29 3.1
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 29 3.1
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 29 3.1
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 29 3.1
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 29 3.1
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 29 3.1
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 29 3.1
AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta... 29 3.1
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 29 3.1
AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb (recombi... 28 4.1
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 28 4.1
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 28 4.1
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z22181-2|CAA80180.1| 510|Caenorhabditis elegans Hypothetical pr... 28 5.4
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 28 5.4
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 28 5.4
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 28 5.4
M37233-1|AAA28121.1| 260|Caenorhabditis elegans myosin II protein. 28 5.4
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 27 7.2
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 27 7.2
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 27 7.2
Z96048-3|CAB09418.1| 733|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z80216-6|CAB02285.2| 313|Caenorhabditis elegans Hypothetical pr... 27 9.5
U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical ... 27 9.5
>Z81527-6|CAB04275.1| 739|Caenorhabditis elegans Hypothetical
protein F35E12.7a protein.
Length = 739
Score = 33.1 bits (72), Expect = 0.14
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = -2
Query: 385 SNSSIKTPYLPIL-RLIGIVMRSWSLAKRPLTPALVTT--SKPSLTPLFLT-SSVIKPLT 218
++S+ T +PI + I + K P+TP+L+TT S L+P+ +T SS+ T
Sbjct: 566 ASSTASTTPIPITTQNISTASIATPSTKTPITPSLITTRSSTTKLSPIVITKSSLAYTAT 625
Query: 217 FTPSASKSEDIFLVRVVLPMPG 152
T +A + + + P+PG
Sbjct: 626 PTSAAPSTSALTITTHTTPIPG 647
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 102 MSKNPNTTIRFFILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVRNK 254
MS T+ + +L+G PG+GKTT L + V++N +VR+K
Sbjct: 332 MSSQDGTSFKAALLSGSPGVGKTTCAYMACQQLGLQLVEMN---ASDVRSK 379
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 126 IRFFILTGDPGIGKTTLTKKISSLLEAEGVK-VNG 227
+R +L G PG GKT + ++I +L A K VNG
Sbjct: 330 VRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNG 364
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 126 IRFFILTGDPGIGKTTLTKKISSLLEAEGVK-VNG 227
+R +L G PG GKT + ++I +L A K VNG
Sbjct: 330 VRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNG 364
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 126 IRFFILTGDPGIGKTTLTKKISSLLEAEGVK-VNG 227
+R +L G PG GKT + ++I +L A K VNG
Sbjct: 264 VRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNG 298
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Frame = +3
Query: 81 YTIRITKMS-KNPNTTI----RFFILTGDPGIGKTTLTKKISSLL 200
Y + ++S K+ NT I R +LTG PG GKT+L K ++ L
Sbjct: 152 YVAALARLSEKHVNTKIINVNRLILLTGPPGTGKTSLCKGLAQHL 196
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +3
Query: 117 NTTIRFFIL--TGDPGIGKTTLTKKISSLLEAEGVKVN-GFITEEVRNKGVREGF 272
N +++ IL TG PGIGKT++ K I+ + + +V+ G I +E +G R +
Sbjct: 324 NNSVKGMILCFTGPPGIGKTSIAKAIAESMGRKFQRVSLGGIRDESDIRGHRRTY 378
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 147 GDPGIGKTTLTKKISSLLEAEGVKVN-GFITEEVRNKGVREGF 272
G PG+GKT++ K I++ L E + + G +T+ KG R +
Sbjct: 512 GPPGVGKTSIAKSIATALNREYFRFSVGGMTDVAEIKGHRRTY 554
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVRNKGVREGFDVVTSAGVRGR 305
+L G PG GKT L + ++ E ++V+G E+ K + EG +V V R
Sbjct: 197 LLFGPPGTGKTLLARAVAHHTECTFIRVSG---SELVQKFIGEGARMVRELFVMAR 249
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNGF-ITEEVRNKGVR 263
IL G+PG GKT L K +++ A ++ G + ++ +G R
Sbjct: 221 ILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGAR 263
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 289 ALVTTSKPSLTPLFLTSSVIKPLTFTP 209
++V+ P LTPLF S+ +PLT TP
Sbjct: 45 SVVSQCPPGLTPLFSNSNFNQPLTCTP 71
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVRNKGVREGFDVVTSAGVRGR 305
+L G PG GKT L + ++ E ++V+G E+ K + EG +V V R
Sbjct: 192 LLYGPPGTGKTLLARAVAHHTECTFIRVSG---SELVQKFIGEGARMVRELFVMAR 244
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVRNKGVREGFDVVTSAGVRGR 305
+L G PG GKT L + ++ E ++V+G E+ K + EG +V V R
Sbjct: 213 LLYGPPGTGKTLLARAVAHHTECTFIRVSG---SELVQKFIGEGARMVRELFVMAR 265
>AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform c protein.
Length = 565
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGV 215
++TGD GIGKT+L + I+ + +G+
Sbjct: 411 LITGDSGIGKTSLMRVIADMWPHQGI 436
>AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform b protein.
Length = 626
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGV 215
++TGD GIGKT+L + I+ + +G+
Sbjct: 439 LITGDSGIGKTSLMRVIADMWPHQGI 464
>AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform a protein.
Length = 598
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGV 215
++TGD GIGKT+L + I+ + +G+
Sbjct: 411 LITGDSGIGKTSLMRVIADMWPHQGI 436
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVRNKGVREGFD 275
++TG PG GK+TL ++++ L ++V ++EVR ++ FD
Sbjct: 13 LVTGSPGTGKSTLGQQVAEKLGFVFIEV----SKEVRENNLQGDFD 54
>AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical
protein Y110A7A.6a protein.
Length = 450
Score = 29.1 bits (62), Expect = 2.3
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 7/128 (5%)
Frame = +3
Query: 78 KYTIRITKMSKNPNTTIRF---FILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVR 248
K T + K S N N +R L G P GKT ++ K+ L G+K F E R
Sbjct: 11 KMTYFVPK-SDNSNEQVRVPNVIALVGLPARGKTYISHKLCRYLNWIGIKTKAFNVGEYR 69
Query: 249 NKGV---REGFDVVTSA-GVRGRLARDQDLITIPIKRKIGKYGVFIEEFENIALPCLNET 416
+ EG + S RG+ RD + + I+ +G+Y + +E E L N T
Sbjct: 70 RRACNLEEEGENEFFSPNNARGQKIRD-ECAKLAIE-DMGRY-LDNKEGEVAILDATNTT 126
Query: 417 TSQPNLLV 440
+ LL+
Sbjct: 127 RDRRKLLM 134
>AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical
protein Y110A7A.6b protein.
Length = 435
Score = 29.1 bits (62), Expect = 2.3
Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 7/128 (5%)
Frame = +3
Query: 78 KYTIRITKMSKNPNTTIRF---FILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVR 248
K T + K S N N +R L G P GKT ++ K+ L G+K F E R
Sbjct: 17 KMTYFVPK-SDNSNEQVRVPNVIALVGLPARGKTYISHKLCRYLNWIGIKTKAFNVGEYR 75
Query: 249 NKGV---REGFDVVTSA-GVRGRLARDQDLITIPIKRKIGKYGVFIEEFENIALPCLNET 416
+ EG + S RG+ RD + + I+ +G+Y + +E E L N T
Sbjct: 76 RRACNLEEEGENEFFSPNNARGQKIRD-ECAKLAIE-DMGRY-LDNKEGEVAILDATNTT 132
Query: 417 TSQPNLLV 440
+ LL+
Sbjct: 133 RDRRKLLM 140
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 563 PVFNRYGCQHNIVRILLRTKNIFDYIFKLFT 471
P++ Y H I+R+ L +++ DY+ K+ T
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 563 PVFNRYGCQHNIVRILLRTKNIFDYIFKLFT 471
P++ Y H I+R+ L +++ DY+ K+ T
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 563 PVFNRYGCQHNIVRILLRTKNIFDYIFKLFT 471
P++ Y H I+R+ L +++ DY+ K+ T
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 99 KMSKNPNTTIRFFILTGDPGIGKTTLTKKISSLLEAEGVKVNG 227
K P+ + F+ G PG GKT L K I++ +A + + G
Sbjct: 511 KFGMQPSRGVLFY---GPPGCGKTLLAKAIANECQANFISIKG 550
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 99 KMSKNPNTTIRFFILTGDPGIGKTTLTKKISSLLEAEGVKVNG 227
K P+ + F+ G PG GKT L K I++ +A + + G
Sbjct: 510 KFGMQPSRGVLFY---GPPGCGKTLLAKAIANECQANFISIKG 549
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 99 KMSKNPNTTIRFFILTGDPGIGKTTLTKKISSLLEAEGVKVNG 227
K P+ + F+ G PG GKT L K I++ +A + + G
Sbjct: 510 KFGMQPSRGVLFY---GPPGCGKTLLAKAIANECQANFISIKG 549
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 563 PVFNRYGCQHNIVRILLRTKNIFDYIFKLFT 471
P++ Y H I+R+ L +++ DY+ K+ T
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 563 PVFNRYGCQHNIVRILLRTKNIFDYIFKLFT 471
P++ Y H I+R+ L +++ DY+ K+ T
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 563 PVFNRYGCQHNIVRILLRTKNIFDYIFKLFT 471
P++ Y H I+R+ L +++ DY+ K+ T
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 563 PVFNRYGCQHNIVRILLRTKNIFDYIFKLFT 471
P++ Y H I+R+ L +++ DY+ K+ T
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 563 PVFNRYGCQHNIVRILLRTKNIFDYIFKLFT 471
P++ Y H I+R+ L +++ DY+ K+ T
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 151
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 563 PVFNRYGCQHNIVRILLRTKNIFDYIFKLFT 471
P++ Y H I+R+ L +++ DY+ K+ T
Sbjct: 151 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 563 PVFNRYGCQHNIVRILLRTKNIFDYIFKLFT 471
P++ Y H I+R+ L +++ DY+ K+ T
Sbjct: 165 PIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNG 227
+LTG PG GKT L K +++ + +NG
Sbjct: 322 LLTGPPGCGKTLLAKALAAESTVPFISMNG 351
>AC024792-1|AAK84610.1| 938|Caenorhabditis elegans Importin beta
family protein 5 protein.
Length = 938
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 297 RGRLARD-QDLITIPIKRKIGKYGVFIEEFENIALPCLNETTSQPNLLVI 443
R +AR QDL+ + G +G+ IE+ I LP L +TT+ P +I
Sbjct: 773 RFTIARSAQDLVQSCENIQTGMFGMLIEKVVCIDLPGLKQTTTGPEKRII 822
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNG 227
+LTG PG GKT L K +++ + +NG
Sbjct: 322 LLTGPPGCGKTLLAKALAAESTVPFISMNG 351
>AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb
(recombination protein) homologprotein 2 protein.
Length = 448
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 93 ITKMSKNPNTTIRFFILTGDPGIGKTTLTKKISSLL 200
I KM + R ++TG+PG GKT + IS L
Sbjct: 55 IVKMIQEGKIAGRALLVTGEPGAGKTAIAIAISKEL 90
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKV 221
+L G PG GKT L + ++S L+ +KV
Sbjct: 180 LLFGPPGTGKTLLARAVASQLDCNFLKV 207
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKV 221
+L G PG GKT L + ++S L+ +KV
Sbjct: 188 LLFGPPGTGKTLLARAVASQLDCNFLKV 215
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEG 212
++TG+ G GKT TKK+ S A G
Sbjct: 171 LITGESGAGKTENTKKVISYFAAVG 195
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEG 212
++TG+ G GKT TKK+ S A G
Sbjct: 171 LITGESGAGKTENTKKVISYFAAVG 195
>Z22181-2|CAA80180.1| 510|Caenorhabditis elegans Hypothetical
protein ZK632.3 protein.
Length = 510
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 396 LPCLNETTSQPNLLVIDEIGSMELSSKKFKNVIENIFSSEQ--NSYNVV 536
LPC + N+LV+ +G L++ + KNV F+ ++ N Y+ V
Sbjct: 323 LPCPQPVKVRRNVLVMSFLGDQGLAAPRLKNVEWEFFTDDERRNVYDQV 371
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
2 protein.
Length = 1947
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEG 212
++TG+ G GKT TKK+ S A G
Sbjct: 171 LITGESGAGKTENTKKVISYFAAVG 195
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 105 SKNPNTTIRFFILTGDPGIGKTTLTKKI 188
SK NT++ ++ +G PG GKT T ++
Sbjct: 189 SKETNTSLSIYV-SGQPGTGKTATTMRV 215
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 417 TSQPNLLVIDEIGSMELSSKKFKNVIENIFSSEQNSYNVVL--ATIP 551
TS+ + V+DE E+ SK FK+ I +F S VVL AT+P
Sbjct: 128 TSRIKMFVLDEAD--EMLSKGFKDQIYEVFRSMPQDVQVVLLSATMP 172
>M37233-1|AAA28121.1| 260|Caenorhabditis elegans myosin II protein.
Length = 260
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEG 212
++TG+ G GKT TKK+ S A G
Sbjct: 60 LITGESGAGKTENTKKVISYFAAVG 84
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 141 LTGDPGIGKTTLTKKISSL--LEAEGVKVNGFITEEVRNKGVREGFDVVTSAGVRGRLA 311
+ G GKTTLT++I+ L A T+ +R + GF +TS R RLA
Sbjct: 18 ILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGR-RLA 75
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 141 LTGDPGIGKTTLTKKISSL--LEAEGVKVNGFITEEVRNKGVREGFDVVTSAGVRGRLA 311
+ G GKTTLT++I+ L A T+ +R + GF +TS R RLA
Sbjct: 18 ILGHVDSGKTTLTRRIAELGSTSAFDAHATSTTTDGIRRNTLDLGFSTMTSLSGR-RLA 75
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNGFITEEVRNKGV 260
++TG+ G GKT TKKI + + V N I + V GV
Sbjct: 171 LITGESGAGKTENTKKIIDFILSSSVS-NNTIGDCVVTSGV 210
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 138 ILTGDPGIGKTTLTKKISSLLEAEGVKVNG 227
ILTG PG GKT L K + + V+G
Sbjct: 330 ILTGPPGTGKTLLAKATAGEANVPFITVSG 359
>Z96048-3|CAB09418.1| 733|Caenorhabditis elegans Hypothetical
protein F57A10.3 protein.
Length = 733
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +3
Query: 315 DQDLITIPIK--RKIGKYGVFIEEFENIALPCLNETTSQPNLLVIDEIGS-MELSSKKFK 485
D+ + PIK K+G++G + + + ++PN+L++DE S ++ SS+
Sbjct: 601 DEFISRFPIKYDTKVGEHGSTLSGGQKQRIAIARALVNKPNILIMDEATSALDASSEYLV 660
Query: 486 NVIENIFSSEQNSYNVVLA 542
+ N + +++A
Sbjct: 661 RIALNKLLANSKQTVMIIA 679
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 563 PVFNRYGCQHNIVRILLRTKNIFDYIFKLFT 471
P++ Y H I R+ L +++ DY+ K+ T
Sbjct: 164 PIYEGYALPHAIQRLDLAGRDLTDYMMKILT 194
>Z80216-6|CAB02285.2| 313|Caenorhabditis elegans Hypothetical
protein F10G8.6 protein.
Length = 313
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 129 RFFILTGDPGIGKTTLTKKISSLLEAEGVK 218
+ IL+G G+GK+TLT ++ L ++ K
Sbjct: 60 KILILSGKGGVGKSTLTSNLARALASDPSK 89
>U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical
protein F42A10.1 protein.
Length = 712
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3
Query: 129 RFFILTGDPGIGKTTLTKKISS 194
R + L G GIGKTTL K ISS
Sbjct: 205 RRYGLVGRNGIGKTTLLKMISS 226
>AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical
protein C34H4.2 protein.
Length = 449
Score = 27.1 bits (57), Expect = 9.5
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 4/122 (3%)
Frame = -2
Query: 520 FCSELKIFSITFLNFLLDNSMLPISSITSKFGCDVVSFKHGNAIFSNSSIKTPYLPILRL 341
FC +FS +N L D +L + S + V + + ++ S L ++++
Sbjct: 3 FCFYFALFSCLVINILADPMILDLKSYKNGTVYQVANLEDSANLYVASDDDPSNLRLIQI 62
Query: 340 IGIVMRSWSLAKRPLTPALVTTSK----PSLTPLFLTSSVIKPLTFTPSASKSEDIFLVR 173
I ++SLA TP +T S S P +T ++ + T + + +F V
Sbjct: 63 I-TGGNTYSLADLVSTPQKITISGGLTITSTNPDAVTYALTGYIYVTTAQQAQDPLFKVL 121
Query: 172 VV 167
VV
Sbjct: 122 VV 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,137,000
Number of Sequences: 27780
Number of extensions: 219317
Number of successful extensions: 878
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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