Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14i04
         (680 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031263-1|AAH31263.1|  252|Homo sapiens similar to CG12314 gene...    73   7e-13
AK090899-1|BAC03541.1|  252|Homo sapiens protein ( Homo sapiens ...    73   9e-13
AL022318-5|CAI17899.1|  386|Homo sapiens protein ( Human DNA seq...    31   3.8  

>BC031263-1|AAH31263.1|  252|Homo sapiens similar to CG12314 gene
           product protein.
          Length = 252

 Score = 73.3 bits (172), Expect = 7e-13
 Identities = 33/103 (32%), Positives = 58/103 (56%)
 Frame = +1

Query: 370 SMDRFLHYLASPKYSLDVCIYVFTNSDIANVLLKLHYKGIKIRIIIDADMAYCTGSNLRR 549
           ++ R L  L + + SLD+C++ F++  + + +  LH +G+++R++ D D     GS +  
Sbjct: 79  ALSRLLRALLAARASLDLCLFAFSSPQLGHAVQLLHQRGVRVRVVTDCDYMALNGSQIGL 138

Query: 550 MERQGIPVRWMKSTNLMHHKFCIIDAVNIDDVHPLVIAGSLNW 678
           + + GI VR  +    MHHKF I+D         ++I GSLNW
Sbjct: 139 LRKAGIQVRHDQDPGYMHHKFAIVD-------KRVLITGSLNW 174


>AK090899-1|BAC03541.1|  252|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33580 fis, clone BRAMY2011841. ).
          Length = 252

 Score = 72.9 bits (171), Expect = 9e-13
 Identities = 33/103 (32%), Positives = 57/103 (55%)
 Frame = +1

Query: 370 SMDRFLHYLASPKYSLDVCIYVFTNSDIANVLLKLHYKGIKIRIIIDADMAYCTGSNLRR 549
           ++ R L  L + + SLD+C++ F++  +   +  LH +G+++R++ D D     GS +  
Sbjct: 79  ALSRLLRALLAARASLDLCLFAFSSPQLGRAVQLLHQRGVRVRVVTDCDYMALNGSQIGL 138

Query: 550 MERQGIPVRWMKSTNLMHHKFCIIDAVNIDDVHPLVIAGSLNW 678
           + + GI VR  +    MHHKF I+D         ++I GSLNW
Sbjct: 139 LRKAGIQVRHDQDPGYMHHKFAIVD-------KRVLITGSLNW 174


>AL022318-5|CAI17899.1|  386|Homo sapiens protein ( Human DNA
           sequence from clone CTA-150C2 on chromosome
           22q13.1-13.2. ).
          Length = 386

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 427 IYVFTNSDIANVLLKLHYKGIKIRIIIDADMAYC 528
           +Y + + D   VLL+LH  G +++I+   D AYC
Sbjct: 135 LYYYRDRDWRWVLLRLHKAGARVKIMDYEDFAYC 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,568,756
Number of Sequences: 237096
Number of extensions: 1458876
Number of successful extensions: 2398
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2398
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)