Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14i04
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   2.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   2.7  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   4.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   4.7  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   6.2  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   6.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   6.2  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 127 CEFETKCILKKKQRN 171
           C  E  CI+ K+QRN
Sbjct: 146 CREEKSCIIDKRQRN 160


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 127 CEFETKCILKKKQRN 171
           C  E  CI+ K+QRN
Sbjct: 146 CREEKSCIIDKRQRN 160


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 55  FRYLILKVYISCFFLLI 5
           F Y ++++YI C  L+I
Sbjct: 241 FSYYLIQIYIPCCMLVI 257


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 55  FRYLILKVYISCFFLLI 5
           F Y ++++YI C  L+I
Sbjct: 241 FSYYLIQIYIPCCMLVI 257


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 439 TNSDIANVLLKLHYKGIKI 495
           T SD+ N++   H KG+KI
Sbjct: 98  TISDLDNLVSAAHEKGLKI 116


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 438 HQL*YCECVTKTTLQRY*NPHYHRCRHGILYRFKFEKN 551
           H L   + +T TTL      HY   +  ++  F+ EK+
Sbjct: 27  HILSKYQLITSTTLNWLPRTHYDHLKEIVIGGFEIEKS 64


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 439 TNSDIANVLLKLHYKGIKI 495
           T SD+ N++   H KG+KI
Sbjct: 98  TISDLDNLVSAAHEKGLKI 116


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,549
Number of Sequences: 438
Number of extensions: 3335
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)