BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14h19
(641 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035350-1|AAH35350.1| 524|Homo sapiens cytochrome P450, family... 31 2.6
AC004523-1|AAC11543.1| 458|Homo sapiens F22329_1 protein. 31 2.6
AY358977-1|AAQ89336.1| 524|Homo sapiens CYP4F12 protein. 31 4.6
AY008841-1|AAG33247.1| 524|Homo sapiens cytochrome P450 isoform... 31 4.6
AB035131-1|BAB18270.1| 524|Homo sapiens cytochrome P450 protein. 31 4.6
AB035130-1|BAB18269.1| 524|Homo sapiens cytochrome P450 protein. 31 4.6
>BC035350-1|AAH35350.1| 524|Homo sapiens cytochrome P450, family 4,
subfamily F, polypeptide 12 protein.
Length = 524
Score = 31.5 bits (68), Expect = 2.6
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -3
Query: 639 FNEIKNFISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRL 460
FN +K++I++ + I+ D H S GSS + + + L LD CI + S +
Sbjct: 157 FNILKSYITIFNKSANIMLDKWQHLASEGSSCLDMFEHISLMTLDSLQKCIFSFDSHCQ- 215
Query: 459 TKPGEVISAI 430
+P E I+ I
Sbjct: 216 ERPSEYIATI 225
>AC004523-1|AAC11543.1| 458|Homo sapiens F22329_1 protein.
Length = 458
Score = 31.5 bits (68), Expect = 2.6
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -3
Query: 639 FNEIKNFISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRL 460
FN +K++I++ + I+ D H S GSS + + + L LD CI + S +
Sbjct: 91 FNILKSYITIFNKSANIMLDKWQHLASEGSSCLDMFEHISLMTLDSLQKCIFSFDSHCQ- 149
Query: 459 TKPGEVISAI 430
+P E I+ I
Sbjct: 150 ERPSEYIATI 159
>AY358977-1|AAQ89336.1| 524|Homo sapiens CYP4F12 protein.
Length = 524
Score = 30.7 bits (66), Expect = 4.6
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -3
Query: 639 FNEIKNFISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRL 460
FN +K++I++ + I+ D H S GSS + + + L LD CI + S +
Sbjct: 157 FNILKSYITIFNKSANIMLDKWQHLASEGSSRLDMFEHISLMTLDSLQKCIFSFDSHCQ- 215
Query: 459 TKPGEVISAI 430
+P E I+ I
Sbjct: 216 ERPSEYIATI 225
>AY008841-1|AAG33247.1| 524|Homo sapiens cytochrome P450 isoform
4F12 protein.
Length = 524
Score = 30.7 bits (66), Expect = 4.6
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -3
Query: 639 FNEIKNFISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRL 460
FN +K++I++ + I+ D H S GSS + + + L LD CI + S +
Sbjct: 157 FNILKSYITIFNKSANIMLDKWQHLASEGSSRLDMFEHISLMTLDSLQKCIFSFDSHCQ- 215
Query: 459 TKPGEVISAI 430
+P E I+ I
Sbjct: 216 ERPSEYIATI 225
>AB035131-1|BAB18270.1| 524|Homo sapiens cytochrome P450 protein.
Length = 524
Score = 30.7 bits (66), Expect = 4.6
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -3
Query: 639 FNEIKNFISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRL 460
FN +K++I++ + I+ D H S GSS + + + L LD CI + S +
Sbjct: 157 FNILKSYITIFNKSANIMLDKWQHLASEGSSRLDMFEHISLMTLDSLQKCIFSFDSHCQ- 215
Query: 459 TKPGEVISAI 430
+P E I+ I
Sbjct: 216 ERPSEYIATI 225
>AB035130-1|BAB18269.1| 524|Homo sapiens cytochrome P450 protein.
Length = 524
Score = 30.7 bits (66), Expect = 4.6
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = -3
Query: 639 FNEIKNFISVLPRPFMILGDFNSHHTSWGSSVSNSYGYELLDILDMYSLCILNSGSPTRL 460
FN +K++I++ + I+ D H S GSS + + + L LD CI + S +
Sbjct: 157 FNILKSYITIFNKSANIMLDKWQHLASEGSSRLDMFEHISLMTLDSLQKCIFSFDSHCQ- 215
Query: 459 TKPGEVISAI 430
+P E I+ I
Sbjct: 216 ERPSEYIATI 225
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,573,992
Number of Sequences: 237096
Number of extensions: 1865269
Number of successful extensions: 3115
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3115
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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