Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte14h13
(591 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomy... 140 2e-34
SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyce... 61 1e-10
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 55 9e-09
SPAC22F8.06 |pam1||20S proteasome component beta 6|Schizosacchar... 48 8e-07
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 40 2e-04
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 34 0.013
SPAC9.09 |met26||homocysteine methyltransferase|Schizosaccharomy... 26 4.7
SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|ch... 25 6.2
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 25 8.3
>SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 194
Score = 140 bits (338), Expect = 2e-34
Identities = 67/146 (45%), Positives = 94/146 (64%), Gaps = 1/146 (0%)
Frame = +2
Query: 155 LQCLLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYI 334
++ LL +Q DFV+ A+ S I ++K D++K ++ +M G++GDT FAEYI
Sbjct: 1 MESLLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYI 60
Query: 335 AKNIQLYKMRNGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENG-PELYFMD 511
A NI LY +R+ L P A ASFTR+ LA LRS PY VN+L+ GY+ G PEL+++D
Sbjct: 61 AANISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLD 120
Query: 512 YLASSVKVPFAAHGYGGYLSLSIMDR 589
YLA+ V+VP+A GY + LSI DR
Sbjct: 121 YLATCVRVPYACQGYSSFYCLSIFDR 146
>SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 262
Score = 61.3 bits (142), Expect = 1e-10
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Frame = +2
Query: 164 LLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAK- 340
+L ++ D VMIAAD S+ + D E++ K+ D ++G GD D Q + K
Sbjct: 46 VLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQIQRLLEKL 105
Query: 341 NIQLYKMRNGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKEN-GPELYFMDYL 517
I+ +GY L PS + + L PY+ +++ G D EN P + F D
Sbjct: 106 EIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAFADLR 165
Query: 518 ASSVKVPFAAHGYGGYLSLSIM 583
++ P A G+ +L+L ++
Sbjct: 166 GTTYSAPAIATGFAMHLALPML 187
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 54.8 bits (126), Expect = 9e-09
Identities = 35/141 (24%), Positives = 69/141 (48%)
Frame = +2
Query: 164 LLGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKN 343
++G+ D +++ AD + +I + +K++ IS + G + DT I+ N
Sbjct: 38 IVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSN 97
Query: 344 IQLYKMRNGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYLAS 523
I+L+ + + A + +++L Y Y V +GGYD + GP L+ + S
Sbjct: 98 IELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGAYLV---LGGYDCK-GPHLFTIAAHGS 153
Query: 524 SVKVPFAAHGYGGYLSLSIMD 586
S K+P+ A G G ++S+++
Sbjct: 154 SDKLPYVALGSGSLAAISVLE 174
>SPAC22F8.06 |pam1||20S proteasome component beta
6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 48.4 bits (110), Expect = 8e-07
Identities = 30/119 (25%), Positives = 54/119 (45%)
Frame = +2
Query: 167 LGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNI 346
+ I + F ++A D + + I + +++++ D LV+G G D + I + I
Sbjct: 17 VAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVKRIQQRI 76
Query: 347 QLYKMRNGYELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYLAS 523
LY + ++ + A R L Y + PY+V + G DKE E+Y D + S
Sbjct: 77 DLYHDNHERKMSAQSCACMVRTLL--YGKRFFPYYVYTTVAGIDKEGKGEIYSFDPVGS 133
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 40.3 bits (90), Expect = 2e-04
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Frame = +2
Query: 167 LGIQCNDFVMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNI 346
LGI D +++AA++ + ++ ++ EK+Y I D ++ V G + D N Y +
Sbjct: 35 LGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINYARRVG 94
Query: 347 QLYKMRNGYELGPSAAASFT---RRNLAEYLRSSTPYFVNVLMGGYDKENGPELY 502
Q Y E+ ++ +Y P+ V+ L G+D G +L+
Sbjct: 95 QQYLQTFNEEMPCEQLVRRVCDLKQGYTQY-GGLRPFGVSFLYAGWDHIRGYQLF 148
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 34.3 bits (75), Expect = 0.013
Identities = 28/132 (21%), Positives = 58/132 (43%)
Frame = +2
Query: 191 VMIAADQSNSHSIMIMKDDEEKIYKISDRLVMGVIGDSGDTNQFAEYIAKNIQLYKMRNG 370
+++ D S +I +K+ +I+ L+ + G + D + + +L+++RN
Sbjct: 73 IVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVLGMECRLHQLRN- 131
Query: 371 YELGPSAAASFTRRNLAEYLRSSTPYFVNVLMGGYDKENGPELYFMDYLASSVKVPFAAH 550
EL +AAS N+ Y + ++ G K G LY++D + +K +
Sbjct: 132 KELISVSAASKILSNIT-YSYKGYGLSMGTMLAGTGK-GGTALYYIDSDGTRLKGDLFSV 189
Query: 551 GYGGYLSLSIMD 586
G G + ++D
Sbjct: 190 GSGSTFAYGVLD 201
>SPAC9.09 |met26||homocysteine methyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 288 VSLVTQETQINLLNILQKIFSCIKCVMGMNWGPQLQPVS 404
VS+ ++ + LLN+L + SCI + P++ PVS
Sbjct: 673 VSIENSKSDMKLLNVLSRYTSCIGPGLFDIHSPRVPPVS 711
>SPBC16A3.03c |lyn1||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 25.4 bits (53), Expect = 6.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 331 IFSKLICVS*VTNDTHY*SIRYLIDLFF 248
++SKLIC S V NDT IR + +F
Sbjct: 612 VYSKLICSSAVRNDTTRSLIRLIPKSYF 639
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 25.0 bits (52), Expect = 8.3
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = -3
Query: 385 GPQFIPITHFIQLNIFCNIFSKLICVS*VTNDTHY*SI-RY-LIDLFFIVFHDHNAVAVA 212
G IP+ +F LN + + +C V D H +I R+ L+D + F ++
Sbjct: 152 GTLCIPLVYFTALNFNYSFLAATLCTLMVALDNHLATISRFILLDSMLLFFIISTFFCLS 211
Query: 211 LIGCYHNKVVALY 173
YH Y
Sbjct: 212 RYHVYHKAPFTFY 224
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,175,675
Number of Sequences: 5004
Number of extensions: 42780
Number of successful extensions: 117
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 256184654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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