Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14h08
         (597 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    23   1.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.0  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   4.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   6.9  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   6.9  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 375 MKDLSEYFIRLKNSWKEFDFSF 310
           ++D      ++K  WK FD++F
Sbjct: 24  LRDFKANIFQVKYQWKYFDYNF 45


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 415 YTQNLNEKYCNAGNE 371
           Y   +NE Y N+GN+
Sbjct: 541 YAMKMNETYINSGNK 555


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 372 KDLSEYFIRLKNSWKEFDFSFNQTSA*MSKRSSQFIFCGDFLK 244
           +D+ E F+R ++ W     SF+ T   ++        CG FLK
Sbjct: 643 RDIPEEFLRPESGWAIGAMSFSATGILIT-----LFVCGVFLK 680


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 256 TAKDKLGTPFTHLRRGLIER 315
           T KD+LG P    ++GL  R
Sbjct: 536 TGKDELGKPSRISKQGLFRR 555


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 583 WFCRCRMLQ 557
           W CRC+ LQ
Sbjct: 926 WSCRCKFLQ 934


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +1

Query: 517  DVYMNMQELQRGPIV 561
            D+YMN++  Q+ P++
Sbjct: 1120 DMYMNLEGEQKDPVI 1134


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 79  LYGHNKRESIELRDS 35
           LYG  KRE IEL  S
Sbjct: 553 LYGRCKREGIELSRS 567


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,803
Number of Sequences: 438
Number of extensions: 3052
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)