Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14h05
         (367 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0207 - 2219247-2219902,2220203-2221156,2223739-2224897           27   3.4  
06_03_0107 + 16709543-16709640,16712555-16713408,16715051-167151...    27   4.5  
07_01_1160 - 10986404-10986760,10986853-10986987,10987074-10987997     27   6.0  

>10_01_0207 - 2219247-2219902,2220203-2221156,2223739-2224897
          Length = 922

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 14/49 (28%), Positives = 30/49 (61%)
 Frame = -1

Query: 235 SAVKKSMADISIGVQLSKYFFRNKMSQKKQMQRN*FYTAKVSEIIQKSN 89
           SAV   +    I   +SKY  R+++S++KQ++R      +VS ++++++
Sbjct: 395 SAVTGELVTRFISYLMSKYSRRHEISEEKQLKRLQQLLLRVSMVVEEAD 443


>06_03_0107 +
           16709543-16709640,16712555-16713408,16715051-16715193,
           16715312-16715573,16715835-16716150,16716257-16716383,
           16717088-16717149,16717291-16717374,16717438-16717494,
           16717705-16717768,16718057-16718152
          Length = 720

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 262 HNTPLTITQSAVKKSMADISIGVQLSKYFFR 170
           +N P TI ++    S+ DIS+G Q  K F R
Sbjct: 306 YNMPSTIDEAISATSLKDISVGQQNCKVFGR 336


>07_01_1160 - 10986404-10986760,10986853-10986987,10987074-10987997
          Length = 471

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 359 LKNCNVLYLLNNAHSRTRCYTHSSQNCSIS*FTQHTT 249
           L NCN  +L N  H R +    +SQN   +  T HT+
Sbjct: 415 LNNCNQKWLANQ-HRRLQLEKKASQNAQFTFKTTHTS 450


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,076,809
Number of Sequences: 37544
Number of extensions: 137850
Number of successful extensions: 264
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 564709324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)