Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14h05
         (367 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical p...    28   3.3  
AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA ...    28   3.3  
AY089546-1|AAL90284.1|  419|Drosophila melanogaster LD22634p pro...    27   7.5  
AE014296-1308|AAF50524.1|  419|Drosophila melanogaster CG12262-P...    27   7.5  
U73846-1|AAB61993.1|  808|Drosophila melanogaster testis-specifi...    27   10.0 

>X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical
            protein protein.
          Length = 3429

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 290  SCAYNNVCDCEHYLINKERYN 352
            SC Y ++CD E +++N   +N
Sbjct: 2594 SCIYQSLCDSESFVVNNSAFN 2614


>AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA
            protein.
          Length = 3419

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 290  SCAYNNVCDCEHYLINKERYN 352
            SC Y ++CD E +++N   +N
Sbjct: 2587 SCIYQSLCDSESFVVNNSAFN 2607


>AY089546-1|AAL90284.1|  419|Drosophila melanogaster LD22634p
           protein.
          Length = 419

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -1

Query: 292 ALKIVP*VSSHNTPLTITQSAVKKSMADISIGVQLSKYFFRNKMSQKKQMQRN*FYTA 119
           ALK      +   P+   Q AV+  +AD++IGV+ S+  +R    +  Q +RN +Y +
Sbjct: 295 ALKYALERKTFGVPIAYHQ-AVQFMLADMAIGVETSRLAWRLSAWEIDQGRRNSYYAS 351


>AE014296-1308|AAF50524.1|  419|Drosophila melanogaster CG12262-PA
           protein.
          Length = 419

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -1

Query: 292 ALKIVP*VSSHNTPLTITQSAVKKSMADISIGVQLSKYFFRNKMSQKKQMQRN*FYTA 119
           ALK      +   P+   Q AV+  +AD++IGV+ S+  +R    +  Q +RN +Y +
Sbjct: 295 ALKYALERKTFGVPIAYHQ-AVQFMLADMAIGVETSRLAWRLSAWEIDQGRRNSYYAS 351


>U73846-1|AAB61993.1|  808|Drosophila melanogaster testis-specific
           RNP-type RNA bindingprotein protein.
          Length = 808

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -2

Query: 318 QSHTLLYAQLSKLFHKLVHTTHHLQSHSLPLRNP 217
           Q HT L+ Q  +L H   H  HH   H  P + P
Sbjct: 111 QRHTALHQQQQQLHHHQPHHNHH---HHHPYQRP 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,670,541
Number of Sequences: 53049
Number of extensions: 276021
Number of successful extensions: 601
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)