Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte14h05
         (367 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   3.4  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   3.4  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    21   3.4  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   4.6  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   4.6  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   8.0  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    20   8.0  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   8.0  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   8.0  

>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 192 NCQNTFFVIKCHKK 151
           +CQ T+  ++CH K
Sbjct: 121 DCQKTYQYVQCHYK 134


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 278 NNFESCAYNNVCDCEHYLINKERYNFLKK 364
           N    C Y N C+ + Y+  K +   LKK
Sbjct: 218 NAVYQCKYGNNCEIDMYMRRKCQECRLKK 246



 Score = 20.6 bits (41), Expect = 6.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 171 VIKCHKKNKCKETNFIQPKCQK 106
           V +C   N C+   +++ KCQ+
Sbjct: 220 VYQCKYGNNCEIDMYMRRKCQE 241


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 278 NNFESCAYNNVCDCEHYLINKERYNFLKK 364
           N    C Y N C+ + Y+  K +   LKK
Sbjct: 15  NAVYQCKYGNNCEIDMYMRRKCQECRLKK 43



 Score = 20.6 bits (41), Expect = 6.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 171 VIKCHKKNKCKETNFIQPKCQK 106
           V +C   N C+   +++ KCQ+
Sbjct: 17  VYQCKYGNNCEIDMYMRRKCQE 38


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 272 LWNNFESCAYNNVCDCEHYLIN 337
           LW    +CAY  + + E  + N
Sbjct: 259 LWKLLPTCAYKQLIESEDAIYN 280


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 269 NLWNNFESCAYNNVCDCEHYLINKER 346
           N +NN+ +  YNN     + +IN E+
Sbjct: 336 NNYNNYNNNNYNNYKKLYYNIINIEQ 361


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 240 VIVSGVLCELTYGTILR 290
           ++  G++C+ T G ILR
Sbjct: 7   LVCLGIVCQGTTGNILR 23


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 266 TNLWNNFESCAYNNVCDCEHYLIN 337
           ++L NN+    YNN     HY IN
Sbjct: 316 SSLSNNYNYNNYNNNYKPLHYNIN 339


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 240 VIVSGVLCELTYGTILR 290
           ++  G++C+ T G ILR
Sbjct: 7   LVCLGIVCQGTTGNILR 23


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 240 VIVSGVLCELTYGTILR 290
           ++  G++C+ T G ILR
Sbjct: 7   LVCLGIVCQGTTGNILR 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,122
Number of Sequences: 438
Number of extensions: 1803
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)